| HES3 | Q5TGS1 | AC037487.4-201 | ENST00000577423 | 625 nt | TSL 3 BASIC | 2.47 | □□□□□ -2.01 | | |
| HES3 | Q5TGS1 | MIR4648-201 | ENST00000580107 | 72 nt | BASIC | 2.47 | □□□□□ -2.01 | | |
| HES3 | Q5TGS1 | AC019183.1-201 | ENST00000580524 | 505 nt | TSL 3 BASIC | 2.47 | □□□□□ -2.01 | | |
| HES3 | Q5TGS1 | MIR3605-201 | ENST00000583214 | 100 nt | BASIC | 2.47 | □□□□□ -2.01 | | |
| HES3 | Q5TGS1 | KATNBL1P1-201 | ENST00000605192 | 748 nt | BASIC | 2.47 | □□□□□ -2.01 | | |
| HES3 | Q5TGS1 | AC013468.1-201 | ENST00000608680 | 598 nt | BASIC | 2.47 | □□□□□ -2.01 | | |
| HES3 | Q5TGS1 | AL450472.3-201 | ENST00000615578 | 367 nt | BASIC | 2.47 | □□□□□ -2.01 | | |
| HES3 | Q5TGS1 | AC073569.3-201 | ENST00000619055 | 682 nt | BASIC | 2.47 | □□□□□ -2.01 | | |
| HES3 | Q5TGS1 | AC092650.2-201 | ENST00000619984 | 902 nt | BASIC | 2.47 | □□□□□ -2.01 | | |
| HES3 | Q5TGS1 | CR381572.1-201 | ENST00000625098 | 102 nt | BASIC | 2.47 | □□□□□ -2.01 | | |
| HES3 | Q5TGS1 | LINC01625-201 | ENST00000454788 | 1690 nt | TSL 2 BASIC | 2.47 | □□□□□ -2.01 | | |
| HES3 | Q5TGS1 | SLAIN1-203 | ENST00000351546 | 2394 nt | TSL 2 BASIC | 2.46 | □□□□□ -2.01 | | |
| HES3 | Q5TGS1 | C5orf46-201 | ENST00000318315 | 506 nt | APPRIS P2 TSL 1 (best) BASIC | 2.46 | □□□□□ -2.02 | | |
| HES3 | Q5TGS1 | RNU6-339P-201 | ENST00000384310 | 107 nt | BASIC | 2.46 | □□□□□ -2.02 | | |
| HES3 | Q5TGS1 | Y_RNA.493-201 | ENST00000384422 | 102 nt | BASIC | 2.46 | □□□□□ -2.02 | | |
| HES3 | Q5TGS1 | MIR525-201 | ENST00000384978 | 85 nt | BASIC | 2.46 | □□□□□ -2.02 | | |
| HES3 | Q5TGS1 | TRAV8-1-201 | ENST00000390430 | 473 nt | APPRIS P1 BASIC | 2.46 | □□□□□ -2.02 | | |
| HES3 | Q5TGS1 | AC093865.1-201 | ENST00000415387 | 433 nt | TSL 3 BASIC | 2.46 | □□□□□ -2.02 | | |
| HES3 | Q5TGS1 | RAD23BP2-201 | ENST00000416003 | 1207 nt | BASIC | 2.46 | □□□□□ -2.02 | | |
| HES3 | Q5TGS1 | LHFPL3-AS1-203 | ENST00000417290 | 950 nt | TSL 1 (best) BASIC | 2.46 | □□□□□ -2.02 | | |
| HES3 | Q5TGS1 | AC114973.1-201 | ENST00000429057 | 632 nt | BASIC | 2.46 | □□□□□ -2.02 | | |
| HES3 | Q5TGS1 | AL139415.2-201 | ENST00000431968 | 163 nt | BASIC | 2.46 | □□□□□ -2.02 | | |
| HES3 | Q5TGS1 | FCF1P1-201 | ENST00000432690 | 571 nt | BASIC | 2.46 | □□□□□ -2.02 | | |
| HES3 | Q5TGS1 | RPL23AP22-201 | ENST00000437556 | 453 nt | BASIC | 2.46 | □□□□□ -2.02 | | |
| HES3 | Q5TGS1 | AC009969.1-201 | ENST00000438726 | 172 nt | BASIC | 2.46 | □□□□□ -2.02 | | |
| HES3 | Q5TGS1 | AC004022.1-201 | ENST00000447766 | 1066 nt | BASIC | 2.46 | □□□□□ -2.02 | | |
| HES3 | Q5TGS1 | AC007879.3-202 | ENST00000448786 | 823 nt | TSL 1 (best) BASIC | 2.46 | □□□□□ -2.02 | | |
| HES3 | Q5TGS1 | AL589935.1-212 | ENST00000450998 | 525 nt | TSL 2 BASIC | 2.46 | □□□□□ -2.02 | | |
| HES3 | Q5TGS1 | AL662889.1-201 | ENST00000453572 | 389 nt | TSL 3 BASIC | 2.46 | □□□□□ -2.02 | | |
| HES3 | Q5TGS1 | snoU13.4-201 | ENST00000458916 | 104 nt | BASIC | 2.46 | □□□□□ -2.02 | | |
| HES3 | Q5TGS1 | HMGB1P25-201 | ENST00000468402 | 607 nt | BASIC | 2.46 | □□□□□ -2.02 | | |
| HES3 | Q5TGS1 | ARNTL2-AS1-201 | ENST00000500498 | 804 nt | TSL 1 (best) BASIC | 2.46 | □□□□□ -2.02 | | |
| HES3 | Q5TGS1 | KLHL2P1-201 | ENST00000508691 | 521 nt | BASIC | 2.46 | □□□□□ -2.02 | | |
| HES3 | Q5TGS1 | RNU6-751P-201 | ENST00000516382 | 101 nt | BASIC | 2.46 | □□□□□ -2.02 | | |
| HES3 | Q5TGS1 | SNORA31.26-201 | ENST00000517250 | 137 nt | BASIC | 2.46 | □□□□□ -2.02 | | |
| HES3 | Q5TGS1 | PTK2-220 | ENST00000520151 | 573 nt | TSL 4 BASIC | 2.46 | □□□□□ -2.02 | | |
| HES3 | Q5TGS1 | AC012413.1-201 | ENST00000521294 | 519 nt | TSL 2 BASIC | 2.46 | □□□□□ -2.02 | | |
| HES3 | Q5TGS1 | AC243972.3-201 | ENST00000539655 | 198 nt | BASIC | 2.46 | □□□□□ -2.02 | | |
| HES3 | Q5TGS1 | ZFAND6-208 | ENST00000558688 | 780 nt | TSL 2 BASIC | 2.46 | □□□□□ -2.02 | | |
| HES3 | Q5TGS1 | AC095057.3-201 | ENST00000567102 | 1157 nt | BASIC | 2.46 | □□□□□ -2.02 | | |
| HES3 | Q5TGS1 | SMG1P7-203 | ENST00000573141 | 619 nt | TSL 2 BASIC | 2.46 | □□□□□ -2.02 | | |
| HES3 | Q5TGS1 | AP005062.1-201 | ENST00000581502 | 607 nt | TSL 3 BASIC | 2.46 | □□□□□ -2.02 | | |
| HES3 | Q5TGS1 | AP001029.3-201 | ENST00000588063 | 596 nt | BASIC | 2.46 | □□□□□ -2.02 | | |
| HES3 | Q5TGS1 | INTS6-AS1-210 | ENST00000595424 | 301 nt | TSL 5 BASIC | 2.46 | □□□□□ -2.02 | | |
| HES3 | Q5TGS1 | AC100814.1-201 | ENST00000606963 | 623 nt | BASIC | 2.46 | □□□□□ -2.02 | | |
| HES3 | Q5TGS1 | AC016542.1-201 | ENST00000608259 | 493 nt | BASIC | 2.46 | □□□□□ -2.02 | | |
| HES3 | Q5TGS1 | LINC00310-205 | ENST00000609062 | 863 nt | TSL 5 BASIC | 2.46 | □□□□□ -2.02 | | |
| HES3 | Q5TGS1 | DLEU2_6.1-201 | ENST00000610536 | 112 nt | BASIC | 2.46 | □□□□□ -2.02 | | |
| HES3 | Q5TGS1 | AL034549.1-201 | ENST00000615120 | 578 nt | TSL 2 BASIC | 2.46 | □□□□□ -2.02 | | |
| HES3 | Q5TGS1 | AC012409.2-201 | ENST00000619812 | 751 nt | TSL 5 BASIC | 2.46 | □□□□□ -2.02 | | |
| HES3 | Q5TGS1 | HERC5-203 | ENST00000508159 | 2243 nt | TSL 2 BASIC | 2.46 | □□□□□ -2.02 | | |
| HES3 | Q5TGS1 | LRRC39-201 | ENST00000342895 | 1881 nt | APPRIS P1 TSL 5 BASIC | 2.45 | □□□□□ -2.02 | | |
| HES3 | Q5TGS1 | AC020571.1-202 | ENST00000433933 | 1413 nt | TSL 1 (best) BASIC | 2.45 | □□□□□ -2.02 | | |
| HES3 | Q5TGS1 | JCHAIN-206 | ENST00000543780 | 1406 nt | APPRIS P1 TSL 1 (best) BASIC | 2.45 | □□□□□ -2.02 | | |
| HES3 | Q5TGS1 | AC103988.1-201 | ENST00000566382 | 2177 nt | BASIC | 2.45 | □□□□□ -2.02 | | |
| HES3 | Q5TGS1 | MDM2-203 | ENST00000299252 | 966 nt | TSL 1 (best) BASIC | 2.45 | □□□□□ -2.02 | | |
| HES3 | Q5TGS1 | GYPA-201 | ENST00000324022 | 751 nt | APPRIS ALT2 TSL 1 (best) BASIC | 2.45 | □□□□□ -2.02 | | |
| HES3 | Q5TGS1 | OR52E6-201 | ENST00000329322 | 970 nt | APPRIS P1 BASIC | 2.45 | □□□□□ -2.02 | | |
| HES3 | Q5TGS1 | RPL9P7-201 | ENST00000330965 | 580 nt | BASIC | 2.45 | □□□□□ -2.02 | | |
| HES3 | Q5TGS1 | LINC00862-202 | ENST00000367356 | 759 nt | TSL 3 BASIC | 2.45 | □□□□□ -2.02 | | |
| HES3 | Q5TGS1 | MAPK8-202 | ENST00000374174 | 739 nt | TSL 3 BASIC | 2.45 | □□□□□ -2.02 | | |
| HES3 | Q5TGS1 | MIR518C-201 | ENST00000384822 | 101 nt | BASIC | 2.45 | □□□□□ -2.02 | | |
| HES3 | Q5TGS1 | RPS3AP26-201 | ENST00000398259 | 784 nt | BASIC | 2.45 | □□□□□ -2.02 | | |
| HES3 | Q5TGS1 | AL512633.1-201 | ENST00000399931 | 655 nt | BASIC | 2.45 | □□□□□ -2.02 | | |
| HES3 | Q5TGS1 | RN7SKP223-201 | ENST00000410582 | 62 nt | BASIC | 2.45 | □□□□□ -2.02 | | |
| HES3 | Q5TGS1 | AC012498.1-201 | ENST00000424037 | 437 nt | BASIC | 2.45 | □□□□□ -2.02 | | |
| HES3 | Q5TGS1 | AC069257.1-202 | ENST00000425275 | 422 nt | TSL 3 BASIC | 2.45 | □□□□□ -2.02 | | |
| HES3 | Q5TGS1 | MAGEA8-AS1-201 | ENST00000427671 | 476 nt | TSL 3 BASIC | 2.45 | □□□□□ -2.02 | | |
| HES3 | Q5TGS1 | AL590502.1-201 | ENST00000433019 | 505 nt | TSL 2 BASIC | 2.45 | □□□□□ -2.02 | | |
| HES3 | Q5TGS1 | AC007179.2-207 | ENST00000435557 | 556 nt | TSL 4 BASIC | 2.45 | □□□□□ -2.02 | | |
| HES3 | Q5TGS1 | AC024597.1-201 | ENST00000442753 | 706 nt | TSL 5 BASIC | 2.45 | □□□□□ -2.02 | | |
| HES3 | Q5TGS1 | COX6CP2-201 | ENST00000444980 | 225 nt | BASIC | 2.45 | □□□□□ -2.02 | | |
| HES3 | Q5TGS1 | AL589963.1-201 | ENST00000449282 | 727 nt | TSL 3 BASIC | 2.45 | □□□□□ -2.02 | | |
| HES3 | Q5TGS1 | RPL23AP31-201 | ENST00000456160 | 467 nt | BASIC | 2.45 | □□□□□ -2.02 | | |
| HES3 | Q5TGS1 | snoU13.23-201 | ENST00000458863 | 104 nt | BASIC | 2.45 | □□□□□ -2.02 | | |
| HES3 | Q5TGS1 | RN7SL75P-201 | ENST00000461926 | 281 nt | BASIC | 2.45 | □□□□□ -2.02 | | |
| HES3 | Q5TGS1 | RN7SL283P-201 | ENST00000489055 | 303 nt | BASIC | 2.45 | □□□□□ -2.02 | | |
| HES3 | Q5TGS1 | AC093278.1-201 | ENST00000494700 | 600 nt | BASIC | 2.45 | □□□□□ -2.02 | | |
| HES3 | Q5TGS1 | ZBTB20-AS3-201 | ENST00000498630 | 464 nt | TSL 3 BASIC | 2.45 | □□□□□ -2.02 | | |
| HES3 | Q5TGS1 | AC025244.2-201 | ENST00000509215 | 422 nt | TSL 3 BASIC | 2.45 | □□□□□ -2.02 | | |
| HES3 | Q5TGS1 | LINC02497-201 | ENST00000515292 | 507 nt | TSL 3 BASIC | 2.45 | □□□□□ -2.02 | | |
| HES3 | Q5TGS1 | SNORA9.3-201 | ENST00000516383 | 129 nt | BASIC | 2.45 | □□□□□ -2.02 | | |
| HES3 | Q5TGS1 | AP003465.1-201 | ENST00000520575 | 382 nt | TSL 2 BASIC | 2.45 | □□□□□ -2.02 | | |
| HES3 | Q5TGS1 | CD69-203 | ENST00000536709 | 1020 nt | TSL 2 BASIC | 2.45 | □□□□□ -2.02 | | |
| HES3 | Q5TGS1 | LINC02300-201 | ENST00000549742 | 665 nt | TSL 4 BASIC | 2.45 | □□□□□ -2.02 | | |
| HES3 | Q5TGS1 | AC074052.2-201 | ENST00000562516 | 214 nt | TSL 3 BASIC | 2.45 | □□□□□ -2.02 | | |
| HES3 | Q5TGS1 | AC009063.1-201 | ENST00000563342 | 702 nt | BASIC | 2.45 | □□□□□ -2.02 | | |
| HES3 | Q5TGS1 | PWRN3-201 | ENST00000566797 | 849 nt | TSL 5 BASIC | 2.45 | □□□□□ -2.02 | | |
| HES3 | Q5TGS1 | AC012254.4-201 | ENST00000588843 | 273 nt | BASIC | 2.45 | □□□□□ -2.02 | | |
| HES3 | Q5TGS1 | Z99129.2-201 | ENST00000619967 | 314 nt | BASIC | 2.45 | □□□□□ -2.02 | | |
| HES3 | Q5TGS1 | AC068631.1-220 | ENST00000630726 | 256 nt | TSL 5 BASIC | 2.45 | □□□□□ -2.02 | | |
| HES3 | Q5TGS1 | ZNF382-210 | ENST00000639288 | 834 nt | TSL 5 BASIC | 2.45 | □□□□□ -2.02 | | |
| HES3 | Q5TGS1 | CFHR3-201 | ENST00000367425 | 1645 nt | APPRIS P1 TSL 1 (best) BASIC | 2.45 | □□□□□ -2.02 | | |
| HES3 | Q5TGS1 | MTND5P31-201 | ENST00000419366 | 1374 nt | BASIC | 2.45 | □□□□□ -2.02 | | |
| HES3 | Q5TGS1 | AC025263.3-201 | ENST00000622965 | 1396 nt | BASIC | 2.45 | □□□□□ -2.02 | | |
| HES3 | Q5TGS1 | CCDC68-201 | ENST00000337363 | 1457 nt | APPRIS P1 TSL 2 BASIC | 2.45 | □□□□□ -2.02 | | |
| HES3 | Q5TGS1 | CHD9-202 | ENST00000398510 | 11337 nt | TSL 1 (best) BASIC | 2.45 | □□□□□ -2.02 | | |
| HES3 | Q5TGS1 | ZCCHC10-202 | ENST00000355372 | 2160 nt | APPRIS ALT2 TSL 2 BASIC | 2.44 | □□□□□ -2.02 | | |
| HES3 | Q5TGS1 | NT5C3A-202 | ENST00000381626 | 1909 nt | APPRIS ALT1 TSL 5 BASIC | 2.44 | □□□□□ -2.02 | | |
| HES3 | Q5TGS1 | SNAPC3-201 | ENST00000380799 | 753 nt | TSL 3 BASIC | 2.44 | □□□□□ -2.02 | | |