Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
LTBQ06643 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
LTBQ06643 AL139811.1-201ENST00000424779 2299 ntBASIC3.74□□□□□ -1.81
LTBQ06643 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
LTBQ06643 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.74□□□□□ -1.81
LTBQ06643 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.74□□□□□ -1.81
LTBQ06643 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
LTBQ06643 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
LTBQ06643 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC3.74□□□□□ -1.81
LTBQ06643 Y_RNA.453-201ENST00000384223 109 ntBASIC3.74□□□□□ -1.81
LTBQ06643 RNU6-921P-201ENST00000384361 107 ntBASIC3.74□□□□□ -1.81
LTBQ06643 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
LTBQ06643 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC3.74□□□□□ -1.81
LTBQ06643 RN7SKP266-201ENST00000410232 287 ntBASIC3.74□□□□□ -1.81
LTBQ06643 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.74□□□□□ -1.81
LTBQ06643 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC3.74□□□□□ -1.81
LTBQ06643 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC3.74□□□□□ -1.81
LTBQ06643 ZNF863P-201ENST00000426746 417 ntBASIC3.74□□□□□ -1.81
LTBQ06643 AC073464.1-201ENST00000429823 534 ntBASIC3.74□□□□□ -1.81
LTBQ06643 MARK2P15-201ENST00000432204 2186 ntBASIC3.74□□□□□ -1.81
LTBQ06643 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.74□□□□□ -1.81
LTBQ06643 AC009961.2-201ENST00000435771 251 ntBASIC3.74□□□□□ -1.81
LTBQ06643 MTND5P14-201ENST00000441481 1267 ntBASIC3.74□□□□□ -1.81
LTBQ06643 RPS4XP4-201ENST00000443195 763 ntBASIC3.74□□□□□ -1.81
LTBQ06643 AC112653.1-201ENST00000443851 386 ntBASIC3.74□□□□□ -1.81
LTBQ06643 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.74□□□□□ -1.81
LTBQ06643 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC3.74□□□□□ -1.81
LTBQ06643 HMGN3P1-201ENST00000453847 193 ntBASIC3.74□□□□□ -1.81
LTBQ06643 RPL38P1-201ENST00000460914 211 ntBASIC3.74□□□□□ -1.81
LTBQ06643 RPS15AP17-201ENST00000470598 390 ntBASIC3.74□□□□□ -1.81
LTBQ06643 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
LTBQ06643 AC010301.1-201ENST00000473936 355 ntBASIC3.74□□□□□ -1.81
LTBQ06643 VN1R105P-201ENST00000486595 910 ntBASIC3.74□□□□□ -1.81
LTBQ06643 HMGB1P36-201ENST00000487709 576 ntBASIC3.74□□□□□ -1.81
LTBQ06643 AC106872.3-201ENST00000495104 446 ntBASIC3.74□□□□□ -1.81
LTBQ06643 AC019235.1-201ENST00000503847 207 ntBASIC3.74□□□□□ -1.81
LTBQ06643 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC3.74□□□□□ -1.81
LTBQ06643 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.74□□□□□ -1.81
LTBQ06643 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC3.74□□□□□ -1.81
LTBQ06643 AC098799.2-201ENST00000509466 868 ntBASIC3.74□□□□□ -1.81
LTBQ06643 AC117522.1-201ENST00000509821 380 ntBASIC3.74□□□□□ -1.81
LTBQ06643 AC099522.1-202ENST00000514718 367 ntBASIC3.74□□□□□ -1.81
LTBQ06643 AC104986.1-201ENST00000517978 436 ntBASIC3.74□□□□□ -1.81
LTBQ06643 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC3.74□□□□□ -1.81
LTBQ06643 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.74□□□□□ -1.81
LTBQ06643 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC3.74□□□□□ -1.81
LTBQ06643 OR5AP1P-201ENST00000529730 940 ntBASIC3.74□□□□□ -1.81
LTBQ06643 OR4A12P-201ENST00000530847 918 ntBASIC3.74□□□□□ -1.81
LTBQ06643 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC3.74□□□□□ -1.81
LTBQ06643 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC3.74□□□□□ -1.81
LTBQ06643 AK6P1-201ENST00000540219 478 ntBASIC3.74□□□□□ -1.81
LTBQ06643 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.74□□□□□ -1.81
LTBQ06643 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.74□□□□□ -1.81
LTBQ06643 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.74□□□□□ -1.81
LTBQ06643 AL133457.1-201ENST00000564251 987 ntBASIC3.74□□□□□ -1.81
LTBQ06643 AC022655.2-201ENST00000577280 318 ntBASIC3.74□□□□□ -1.81
LTBQ06643 AC006504.3-201ENST00000586818 523 ntBASIC3.74□□□□□ -1.81
LTBQ06643 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.74□□□□□ -1.81
LTBQ06643 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.74□□□□□ -1.81
LTBQ06643 MIR6867-201ENST00000610636 67 ntBASIC3.74□□□□□ -1.81
LTBQ06643 MIR8059-201ENST00000620427 81 ntBASIC3.74□□□□□ -1.81
LTBQ06643 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC3.74□□□□□ -1.81
LTBQ06643 AC110994.2-201ENST00000635481 492 ntBASIC3.74□□□□□ -1.81
LTBQ06643 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC3.74□□□□□ -1.81
LTBQ06643 MAPK10-253ENST00000641010 4072 ntBASIC3.74□□□□□ -1.81
LTBQ06643 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
LTBQ06643 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
LTBQ06643 AL133243.3-201ENST00000617415 3004 ntBASIC3.74□□□□□ -1.81
LTBQ06643 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.74□□□□□ -1.81
LTBQ06643 ANKRD20A10P-201ENST00000457591 1515 ntBASIC3.74□□□□□ -1.81
LTBQ06643 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.74□□□□□ -1.81
LTBQ06643 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
LTBQ06643 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.74□□□□□ -1.81
LTBQ06643 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
LTBQ06643 Z73965.1-201ENST00000623412 2297 ntBASIC3.73□□□□□ -1.81
LTBQ06643 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.73□□□□□ -1.81
LTBQ06643 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC3.73□□□□□ -1.81
LTBQ06643 AL022578.1-201ENST00000439330 1433 ntBASIC3.73□□□□□ -1.81
LTBQ06643 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
LTBQ06643 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
LTBQ06643 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC3.73□□□□□ -1.81
LTBQ06643 RNU6-797P-201ENST00000363101 109 ntBASIC3.73□□□□□ -1.81
LTBQ06643 U8.3-201ENST00000363321 132 ntBASIC3.73□□□□□ -1.81
LTBQ06643 SNORA72.1-201ENST00000363485 129 ntBASIC3.73□□□□□ -1.81
LTBQ06643 RNU6-1090P-201ENST00000364065 94 ntBASIC3.73□□□□□ -1.81
LTBQ06643 RNY4P34-201ENST00000364779 95 ntBASIC3.73□□□□□ -1.81
LTBQ06643 FGF7P8-201ENST00000402994 292 ntBASIC3.73□□□□□ -1.81
LTBQ06643 HMGB1P17-201ENST00000403495 628 ntBASIC3.73□□□□□ -1.81
LTBQ06643 MIR1305-201ENST00000408300 86 ntBASIC3.73□□□□□ -1.81
LTBQ06643 AC093578.1-201ENST00000415219 368 ntBASIC3.73□□□□□ -1.81
LTBQ06643 AL356095.1-201ENST00000417217 199 ntBASIC3.73□□□□□ -1.81
LTBQ06643 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.73□□□□□ -1.81
LTBQ06643 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC3.73□□□□□ -1.81
LTBQ06643 USP9YP36-201ENST00000424581 829 ntBASIC3.73□□□□□ -1.81
LTBQ06643 COX6CP15-201ENST00000426313 211 ntBASIC3.73□□□□□ -1.81
LTBQ06643 COX6B1P7-201ENST00000430845 235 ntBASIC3.73□□□□□ -1.81
LTBQ06643 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC3.73□□□□□ -1.81
LTBQ06643 SNRPEP7-201ENST00000438350 220 ntBASIC3.73□□□□□ -1.81
LTBQ06643 RABEPKP1-201ENST00000440529 1026 ntBASIC3.73□□□□□ -1.81
LTBQ06643 AC006011.1-201ENST00000442758 349 ntBASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms