Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 AL121769.1-201ENST00000469473 401 ntBASIC1.51□□□□□ -2.17
RPS28P62857 AC003982.1-202ENST00000469928 248 ntBASIC1.51□□□□□ -2.17
RPS28P62857 GZMAP1-201ENST00000503054 631 ntBASIC1.51□□□□□ -2.17
RPS28P62857 AC138853.1-201ENST00000503549 823 ntBASIC1.51□□□□□ -2.17
RPS28P62857 SNRPCP2-201ENST00000504370 475 ntBASIC1.51□□□□□ -2.17
RPS28P62857 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
RPS28P62857 AC008958.1-201ENST00000511047 682 ntBASIC1.51□□□□□ -2.17
RPS28P62857 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC1.51□□□□□ -2.17
RPS28P62857 AC004980.4-201ENST00000513375 203 ntBASIC1.51□□□□□ -2.17
RPS28P62857 RNU1-40P-201ENST00000516816 164 ntBASIC1.51□□□□□ -2.17
RPS28P62857 RNU1-97P-201ENST00000516872 164 ntBASIC1.51□□□□□ -2.17
RPS28P62857 AP002748.2-201ENST00000528671 348 ntBASIC1.51□□□□□ -2.17
RPS28P62857 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC1.51□□□□□ -2.17
RPS28P62857 AC103843.2-201ENST00000530523 682 ntBASIC1.51□□□□□ -2.17
RPS28P62857 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.51□□□□□ -2.17
RPS28P62857 AC004217.3-201ENST00000551552 878 ntBASIC1.51□□□□□ -2.17
RPS28P62857 AC022404.1-201ENST00000555320 273 ntBASIC1.51□□□□□ -2.17
RPS28P62857 AL133241.1-201ENST00000556832 487 ntBASIC1.51□□□□□ -2.17
RPS28P62857 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
RPS28P62857 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.51□□□□□ -2.17
RPS28P62857 MIR3187-201ENST00000583431 70 ntBASIC1.51□□□□□ -2.17
RPS28P62857 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC1.51□□□□□ -2.17
RPS28P62857 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC1.51□□□□□ -2.17
RPS28P62857 KDM5DP1-201ENST00000622542 298 ntBASIC1.51□□□□□ -2.17
RPS28P62857 DUXAP9-208ENST00000622815 614 ntBASIC1.51□□□□□ -2.17
RPS28P62857 LINC00216-201ENST00000623548 1126 ntBASIC1.51□□□□□ -2.17
RPS28P62857 AC073592.6-201ENST00000624271 415 ntBASIC1.51□□□□□ -2.17
RPS28P62857 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC1.51□□□□□ -2.17
RPS28P62857 AC008555.8-201ENST00000623602 2168 ntBASIC1.51□□□□□ -2.17
RPS28P62857 ZNF702P-202ENST00000434269 1966 ntBASIC1.5□□□□□ -2.17
RPS28P62857 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
RPS28P62857 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC1.5□□□□□ -2.17
RPS28P62857 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
RPS28P62857 RNU5A-1-201ENST00000362698 116 ntBASIC1.5□□□□□ -2.17
RPS28P62857 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC1.5□□□□□ -2.17
RPS28P62857 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
RPS28P62857 AL359511.1-201ENST00000402970 211 ntBASIC1.5□□□□□ -2.17
RPS28P62857 SUMO2P12-201ENST00000405924 140 ntBASIC1.5□□□□□ -2.17
RPS28P62857 RNU2-17P-201ENST00000410290 190 ntBASIC1.5□□□□□ -2.17
RPS28P62857 RNU2-43P-201ENST00000410306 190 ntBASIC1.5□□□□□ -2.17
RPS28P62857 ZNF92P1Y-201ENST00000415010 1191 ntBASIC1.5□□□□□ -2.17
RPS28P62857 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC1.5□□□□□ -2.17
RPS28P62857 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC1.5□□□□□ -2.17
RPS28P62857 ATP5F1P1-201ENST00000433775 569 ntBASIC1.5□□□□□ -2.17
RPS28P62857 AL049734.2-201ENST00000441066 616 ntBASIC1.5□□□□□ -2.17
RPS28P62857 AC016691.1-201ENST00000441321 413 ntBASIC1.5□□□□□ -2.17
RPS28P62857 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC1.5□□□□□ -2.17
RPS28P62857 ATG12P2-201ENST00000456830 416 ntBASIC1.5□□□□□ -2.17
RPS28P62857 UBDP1-202ENST00000457888 382 ntBASIC1.5□□□□□ -2.17
RPS28P62857 RN7SL30P-201ENST00000488416 306 ntBASIC1.5□□□□□ -2.17
RPS28P62857 RN7SL466P-201ENST00000497546 295 ntBASIC1.5□□□□□ -2.17
RPS28P62857 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC1.5□□□□□ -2.17
RPS28P62857 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC1.5□□□□□ -2.17
RPS28P62857 SNORA31.23-201ENST00000517219 133 ntBASIC1.5□□□□□ -2.17
RPS28P62857 RANP9-201ENST00000519957 271 ntBASIC1.5□□□□□ -2.17
RPS28P62857 OR5AK1P-201ENST00000524837 922 ntBASIC1.5□□□□□ -2.17
RPS28P62857 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC1.5□□□□□ -2.17
RPS28P62857 OR5AL2P-201ENST00000532185 920 ntBASIC1.5□□□□□ -2.17
RPS28P62857 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
RPS28P62857 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC1.5□□□□□ -2.17
RPS28P62857 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC1.5□□□□□ -2.17
RPS28P62857 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC1.5□□□□□ -2.17
RPS28P62857 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC1.5□□□□□ -2.17
RPS28P62857 AL671309.1-201ENST00000603750 544 ntBASIC1.5□□□□□ -2.17
RPS28P62857 AL445567.2-201ENST00000618935 498 ntBASIC1.5□□□□□ -2.17
RPS28P62857 MIR6823-201ENST00000622118 61 ntBASIC1.5□□□□□ -2.17
RPS28P62857 PSMD5-AS1-215ENST00000640622 205 ntBASIC1.5□□□□□ -2.17
RPS28P62857 ADAM3A-203ENST00000461344 2157 ntBASIC1.49□□□□□ -2.17
RPS28P62857 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.49□□□□□ -2.17
RPS28P62857 RLIMP1-201ENST00000339626 1680 ntBASIC1.49□□□□□ -2.17
RPS28P62857 OR1S2-201ENST00000302592 978 ntBASIC1.49□□□□□ -2.17
RPS28P62857 RN7SKP257-201ENST00000364525 309 ntBASIC1.49□□□□□ -2.17
RPS28P62857 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC1.49□□□□□ -2.17
RPS28P62857 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
RPS28P62857 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC1.49□□□□□ -2.17
RPS28P62857 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.49□□□□□ -2.17
RPS28P62857 MEAF6P1-201ENST00000416092 327 ntBASIC1.49□□□□□ -2.17
RPS28P62857 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC1.49□□□□□ -2.17
RPS28P62857 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC1.49□□□□□ -2.17
RPS28P62857 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC1.49□□□□□ -2.17
RPS28P62857 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC1.49□□□□□ -2.17
RPS28P62857 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC1.49□□□□□ -2.17
RPS28P62857 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
RPS28P62857 UBE2D3P1-201ENST00000436669 444 ntBASIC1.49□□□□□ -2.17
RPS28P62857 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC1.49□□□□□ -2.17
RPS28P62857 RPL12P49-201ENST00000441100 121 ntBASIC1.49□□□□□ -2.17
RPS28P62857 RPL23AP16-201ENST00000441715 421 ntBASIC1.49□□□□□ -2.17
RPS28P62857 AC005297.2-201ENST00000450430 606 ntBASIC1.49□□□□□ -2.17
RPS28P62857 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC1.49□□□□□ -2.17
RPS28P62857 RFC5P1-201ENST00000454419 874 ntBASIC1.49□□□□□ -2.17
RPS28P62857 CYCSP53-201ENST00000455540 265 ntBASIC1.49□□□□□ -2.17
RPS28P62857 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC1.49□□□□□ -2.17
RPS28P62857 RNU6-717P-201ENST00000459076 104 ntBASIC1.49□□□□□ -2.17
RPS28P62857 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC1.49□□□□□ -2.17
RPS28P62857 AC025181.1-201ENST00000477507 416 ntBASIC1.49□□□□□ -2.17
RPS28P62857 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC1.49□□□□□ -2.17
RPS28P62857 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC1.49□□□□□ -2.17
RPS28P62857 AC113420.1-201ENST00000507903 571 ntBASIC1.49□□□□□ -2.17
RPS28P62857 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC1.49□□□□□ -2.17
RPS28P62857 SSX6-203ENST00000509958 336 ntTSL 3 BASIC1.49□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms