Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.27□□□□□ -2.05
VBP1P61758 AGGF1P5-201ENST00000567900 919 ntBASIC2.27□□□□□ -2.05
VBP1P61758 HMGB1P6-201ENST00000569046 646 ntBASIC2.27□□□□□ -2.05
VBP1P61758 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC2.27□□□□□ -2.05
VBP1P61758 AC005332.10-201ENST00000612725 619 ntBASIC2.27□□□□□ -2.05
VBP1P61758 CR392039.5-201ENST00000623201 510 ntBASIC2.27□□□□□ -2.05
VBP1P61758 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC2.27□□□□□ -2.05
VBP1P61758 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.27□□□□□ -2.05
VBP1P61758 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
VBP1P61758 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.27□□□□□ -2.05
VBP1P61758 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.27□□□□□ -2.05
VBP1P61758 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
VBP1P61758 ZNF658B-202ENST00000615961 3375 ntBASIC2.26□□□□□ -2.05
VBP1P61758 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
VBP1P61758 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
VBP1P61758 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC2.26□□□□□ -2.05
VBP1P61758 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC2.26□□□□□ -2.05
VBP1P61758 U3.20-201ENST00000390909 217 ntBASIC2.26□□□□□ -2.05
VBP1P61758 AL136372.1-201ENST00000403060 228 ntBASIC2.26□□□□□ -2.05
VBP1P61758 RN7SKP202-201ENST00000410439 330 ntBASIC2.26□□□□□ -2.05
VBP1P61758 AC007389.2-201ENST00000434630 306 ntBASIC2.26□□□□□ -2.05
VBP1P61758 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
VBP1P61758 AL031659.1-201ENST00000447075 539 ntBASIC2.26□□□□□ -2.05
VBP1P61758 WASF1P1-201ENST00000447560 1131 ntBASIC2.26□□□□□ -2.05
VBP1P61758 NANOGNBP1-201ENST00000448444 480 ntBASIC2.26□□□□□ -2.05
VBP1P61758 AL133547.1-201ENST00000448546 220 ntBASIC2.26□□□□□ -2.05
VBP1P61758 AC112492.1-201ENST00000449607 712 ntBASIC2.26□□□□□ -2.05
VBP1P61758 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC2.26□□□□□ -2.05
VBP1P61758 AC006445.1-201ENST00000491925 405 ntBASIC2.26□□□□□ -2.05
VBP1P61758 AC083906.5-201ENST00000503722 328 ntBASIC2.26□□□□□ -2.05
VBP1P61758 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.26□□□□□ -2.05
VBP1P61758 MRPS36P2-201ENST00000512569 299 ntBASIC2.26□□□□□ -2.05
VBP1P61758 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.26□□□□□ -2.05
VBP1P61758 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC2.26□□□□□ -2.05
VBP1P61758 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
VBP1P61758 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC2.26□□□□□ -2.05
VBP1P61758 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC2.26□□□□□ -2.05
VBP1P61758 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC2.26□□□□□ -2.05
VBP1P61758 SNORD14A-201ENST00000606526 91 ntBASIC2.26□□□□□ -2.05
VBP1P61758 AP002826.1-201ENST00000608835 315 ntBASIC2.26□□□□□ -2.05
VBP1P61758 AL031601.2-202ENST00000622650 282 ntBASIC2.26□□□□□ -2.05
VBP1P61758 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
VBP1P61758 U6.107-201ENST00000637108 79 ntBASIC2.26□□□□□ -2.05
VBP1P61758 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
VBP1P61758 AC012321.1-201ENST00000561622 1588 ntBASIC2.26□□□□□ -2.05
VBP1P61758 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC2.26□□□□□ -2.05
VBP1P61758 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
VBP1P61758 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.26□□□□□ -2.05
VBP1P61758 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
VBP1P61758 ZNF720P1-201ENST00000562403 1939 ntBASIC2.25□□□□□ -2.05
VBP1P61758 TAB3P1-202ENST00000452645 1634 ntBASIC2.25□□□□□ -2.05
VBP1P61758 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
VBP1P61758 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC2.25□□□□□ -2.05
VBP1P61758 SNORA9-201ENST00000384215 133 ntBASIC2.25□□□□□ -2.05
VBP1P61758 MIR323B-201ENST00000385269 82 ntBASIC2.25□□□□□ -2.05
VBP1P61758 U3.40-201ENST00000408706 208 ntBASIC2.25□□□□□ -2.05
VBP1P61758 STAT4-203ENST00000409995 709 ntTSL 5 BASIC2.25□□□□□ -2.05
VBP1P61758 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.25□□□□□ -2.05
VBP1P61758 AL807761.1-201ENST00000417622 171 ntBASIC2.25□□□□□ -2.05
VBP1P61758 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.25□□□□□ -2.05
VBP1P61758 AC069157.1-201ENST00000421749 137 ntBASIC2.25□□□□□ -2.05
VBP1P61758 MTCO2P17-201ENST00000424336 677 ntBASIC2.25□□□□□ -2.05
VBP1P61758 AC018644.1-201ENST00000429934 551 ntBASIC2.25□□□□□ -2.05
VBP1P61758 AC098826.1-201ENST00000433943 471 ntBASIC2.25□□□□□ -2.05
VBP1P61758 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC2.25□□□□□ -2.05
VBP1P61758 MORF4L1P4-201ENST00000450245 976 ntBASIC2.25□□□□□ -2.05
VBP1P61758 snoU13.28-201ENST00000459235 104 ntBASIC2.25□□□□□ -2.05
VBP1P61758 RPS27P21-201ENST00000486977 252 ntBASIC2.25□□□□□ -2.05
VBP1P61758 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.25□□□□□ -2.05
VBP1P61758 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC2.25□□□□□ -2.05
VBP1P61758 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC2.25□□□□□ -2.05
VBP1P61758 AC118942.1-201ENST00000529674 1035 ntBASIC2.25□□□□□ -2.05
VBP1P61758 AC078814.3-201ENST00000553036 491 ntBASIC2.25□□□□□ -2.05
VBP1P61758 AC011471.1-201ENST00000585766 187 ntBASIC2.25□□□□□ -2.05
VBP1P61758 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC2.25□□□□□ -2.05
VBP1P61758 SUMO2P14-201ENST00000604488 293 ntBASIC2.25□□□□□ -2.05
VBP1P61758 AP004247.3-201ENST00000608682 624 ntBASIC2.25□□□□□ -2.05
VBP1P61758 MIR7112-201ENST00000616126 65 ntBASIC2.25□□□□□ -2.05
VBP1P61758 AL449363.1-201ENST00000617815 186 ntBASIC2.25□□□□□ -2.05
VBP1P61758 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.25□□□□□ -2.05
VBP1P61758 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC2.25□□□□□ -2.05
VBP1P61758 AL355480.1-201ENST00000629041 99 ntBASIC2.25□□□□□ -2.05
VBP1P61758 AC012442.3-202ENST00000636742 206 ntBASIC2.25□□□□□ -2.05
VBP1P61758 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.25□□□□□ -2.05
VBP1P61758 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.25□□□□□ -2.05
VBP1P61758 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
VBP1P61758 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
VBP1P61758 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
VBP1P61758 AC104446.1-201ENST00000613728 1321 ntBASIC2.24□□□□□ -2.05
VBP1P61758 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
VBP1P61758 MIR21-201ENST00000362134 72 ntBASIC2.24□□□□□ -2.05
VBP1P61758 SNORA3A-201ENST00000364113 130 ntBASIC2.24□□□□□ -2.05
VBP1P61758 SNORA70.2-201ENST00000364506 135 ntBASIC2.24□□□□□ -2.05
VBP1P61758 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC2.24□□□□□ -2.05
VBP1P61758 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
VBP1P61758 AP002784.2-201ENST00000397300 549 ntBASIC2.24□□□□□ -2.05
VBP1P61758 AL138827.1-201ENST00000402666 306 ntBASIC2.24□□□□□ -2.05
VBP1P61758 UBE2V1P9-201ENST00000414760 368 ntBASIC2.24□□□□□ -2.05
VBP1P61758 SEPT2P1-201ENST00000419651 180 ntBASIC2.24□□□□□ -2.05
VBP1P61758 ARF4P4-201ENST00000439608 520 ntBASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 119.3 ms