Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 MIR4293-201ENST00000584305 78 ntBASIC4.2□□□□□ -1.74
CLRN1P58418 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.2□□□□□ -1.74
CLRN1P58418 MIR7155-201ENST00000615925 56 ntBASIC4.2□□□□□ -1.74
CLRN1P58418 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC4.2□□□□□ -1.74
CLRN1P58418 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
CLRN1P58418 ZNF33CP-201ENST00000432492 2030 ntBASIC4.2□□□□□ -1.74
CLRN1P58418 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CLRN1P58418 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.2□□□□□ -1.74
CLRN1P58418 MAPK10-286ENST00000641208 8747 ntBASIC4.2□□□□□ -1.74
CLRN1P58418 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
CLRN1P58418 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CLRN1P58418 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CLRN1P58418 AC006971.1-201ENST00000407916 4486 ntBASIC4.2□□□□□ -1.74
CLRN1P58418 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CLRN1P58418 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CLRN1P58418 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.2□□□□□ -1.74
CLRN1P58418 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CLRN1P58418 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CLRN1P58418 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CLRN1P58418 AC000123.3-201ENST00000624029 4975 ntBASIC4.2□□□□□ -1.74
CLRN1P58418 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CLRN1P58418 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
CLRN1P58418 AC004972.1-201ENST00000623934 2209 ntBASIC4.19□□□□□ -1.74
CLRN1P58418 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.19□□□□□ -1.74
CLRN1P58418 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.19□□□□□ -1.74
CLRN1P58418 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CLRN1P58418 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CLRN1P58418 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.19□□□□□ -1.74
CLRN1P58418 AC126323.6-202ENST00000568092 3511 ntBASIC4.19□□□□□ -1.74
CLRN1P58418 MTND4P35-201ENST00000604257 1375 ntBASIC4.19□□□□□ -1.74
CLRN1P58418 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.19□□□□□ -1.74
CLRN1P58418 RNU1-83P-201ENST00000363426 164 ntBASIC4.19□□□□□ -1.74
CLRN1P58418 SNORA74A-201ENST00000364089 198 ntBASIC4.19□□□□□ -1.74
CLRN1P58418 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CLRN1P58418 AL590762.2-201ENST00000395798 571 ntBASIC4.19□□□□□ -1.74
CLRN1P58418 TANK-203ENST00000402568 878 ntTSL 5 BASIC4.19□□□□□ -1.74
CLRN1P58418 ARL4AP5-201ENST00000404372 599 ntBASIC4.19□□□□□ -1.74
CLRN1P58418 RN7SKP32-201ENST00000410167 303 ntBASIC4.19□□□□□ -1.74
CLRN1P58418 RN7SKP159-201ENST00000410657 292 ntBASIC4.19□□□□□ -1.74
CLRN1P58418 AC016769.2-201ENST00000414815 475 ntBASIC4.19□□□□□ -1.74
CLRN1P58418 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC4.19□□□□□ -1.74
CLRN1P58418 AC018630.2-202ENST00000422992 927 ntBASIC4.19□□□□□ -1.74
CLRN1P58418 RPS27P18-201ENST00000431701 247 ntBASIC4.19□□□□□ -1.74
CLRN1P58418 NRBF2P3-201ENST00000432731 865 ntBASIC4.19□□□□□ -1.74
CLRN1P58418 MTND6P18-201ENST00000439477 513 ntBASIC4.19□□□□□ -1.74
CLRN1P58418 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.19□□□□□ -1.74
CLRN1P58418 MRPL50P4-201ENST00000446432 475 ntBASIC4.19□□□□□ -1.74
CLRN1P58418 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC4.19□□□□□ -1.74
CLRN1P58418 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.19□□□□□ -1.74
CLRN1P58418 AC005008.1-201ENST00000456151 612 ntBASIC4.19□□□□□ -1.74
CLRN1P58418 AC108751.2-201ENST00000469993 231 ntBASIC4.19□□□□□ -1.74
CLRN1P58418 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC4.19□□□□□ -1.74
CLRN1P58418 AC092436.1-201ENST00000506450 503 ntBASIC4.19□□□□□ -1.74
CLRN1P58418 NDUFB5P1-201ENST00000508134 564 ntBASIC4.19□□□□□ -1.74
CLRN1P58418 AC112206.3-201ENST00000514578 389 ntBASIC4.19□□□□□ -1.74
CLRN1P58418 AC105029.1-201ENST00000520250 669 ntBASIC4.19□□□□□ -1.74
CLRN1P58418 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.19□□□□□ -1.74
CLRN1P58418 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC4.19□□□□□ -1.74
CLRN1P58418 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CLRN1P58418 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.19□□□□□ -1.74
CLRN1P58418 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.19□□□□□ -1.74
CLRN1P58418 AP001880.2-201ENST00000538233 448 ntBASIC4.19□□□□□ -1.74
CLRN1P58418 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.19□□□□□ -1.74
CLRN1P58418 AC243960.4-201ENST00000600532 288 ntBASIC4.19□□□□□ -1.74
CLRN1P58418 AL031320.1-201ENST00000604177 357 ntBASIC4.19□□□□□ -1.74
CLRN1P58418 AC093838.1-201ENST00000613014 469 ntBASIC4.19□□□□□ -1.74
CLRN1P58418 AC093913.1-201ENST00000614178 329 ntBASIC4.19□□□□□ -1.74
CLRN1P58418 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CLRN1P58418 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CLRN1P58418 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CLRN1P58418 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
CLRN1P58418 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.19□□□□□ -1.74
CLRN1P58418 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.19□□□□□ -1.74
CLRN1P58418 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
CLRN1P58418 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CLRN1P58418 AC104118.1-201ENST00000607625 1589 ntBASIC4.19□□□□□ -1.74
CLRN1P58418 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
CLRN1P58418 AC092435.4-201ENST00000623012 4159 ntBASIC4.18□□□□□ -1.74
CLRN1P58418 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CLRN1P58418 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.18□□□□□ -1.74
CLRN1P58418 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CLRN1P58418 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
CLRN1P58418 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.18□□□□□ -1.74
CLRN1P58418 RNA5SP191-201ENST00000362585 102 ntBASIC4.18□□□□□ -1.74
CLRN1P58418 RNU4-79P-201ENST00000362764 141 ntBASIC4.18□□□□□ -1.74
CLRN1P58418 Y_RNA.231-201ENST00000364358 102 ntBASIC4.18□□□□□ -1.74
CLRN1P58418 RNU4-20P-201ENST00000365601 151 ntBASIC4.18□□□□□ -1.74
CLRN1P58418 RNU6-754P-201ENST00000391166 107 ntBASIC4.18□□□□□ -1.74
CLRN1P58418 Z98745.1-201ENST00000402553 494 ntBASIC4.18□□□□□ -1.74
CLRN1P58418 Y_RNA.615-201ENST00000410769 117 ntBASIC4.18□□□□□ -1.74
CLRN1P58418 RNU6-193P-201ENST00000410977 107 ntBASIC4.18□□□□□ -1.74
CLRN1P58418 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.18□□□□□ -1.74
CLRN1P58418 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.18□□□□□ -1.74
CLRN1P58418 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.18□□□□□ -1.74
CLRN1P58418 IFNA20P-201ENST00000436840 528 ntBASIC4.18□□□□□ -1.74
CLRN1P58418 H2AFZP5-201ENST00000446960 382 ntBASIC4.18□□□□□ -1.74
CLRN1P58418 MTND1P18-201ENST00000448191 573 ntBASIC4.18□□□□□ -1.74
CLRN1P58418 AC234775.1-201ENST00000454247 670 ntBASIC4.18□□□□□ -1.74
CLRN1P58418 AC091685.2-201ENST00000454924 864 ntBASIC4.18□□□□□ -1.74
CLRN1P58418 RN7SL329P-201ENST00000467740 299 ntBASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 147.7 ms