Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 AC091046.2-201ENST00000620775 665 ntBASIC2.97□□□□□ -1.93
CDH6P55285 AC010338.1-201ENST00000621823 717 ntBASIC2.97□□□□□ -1.93
CDH6P55285 AC093875.1-201ENST00000623688 504 ntBASIC2.97□□□□□ -1.93
CDH6P55285 AL512283.1-201ENST00000606756 1384 ntBASIC2.97□□□□□ -1.93
CDH6P55285 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.96□□□□□ -1.93
CDH6P55285 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.96□□□□□ -1.94
CDH6P55285 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
CDH6P55285 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
CDH6P55285 RNU6-173P-201ENST00000364215 104 ntBASIC2.96□□□□□ -1.94
CDH6P55285 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
CDH6P55285 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
CDH6P55285 CD24P4-201ENST00000382840 243 ntBASIC2.96□□□□□ -1.94
CDH6P55285 SNORD51-201ENST00000384320 80 ntBASIC2.96□□□□□ -1.94
CDH6P55285 SNORA48.5-201ENST00000391143 135 ntBASIC2.96□□□□□ -1.94
CDH6P55285 SNORA26.7-201ENST00000391288 122 ntBASIC2.96□□□□□ -1.94
CDH6P55285 AL133264.1-201ENST00000407157 562 ntBASIC2.96□□□□□ -1.94
CDH6P55285 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
CDH6P55285 MTCO1P39-201ENST00000426148 480 ntBASIC2.96□□□□□ -1.94
CDH6P55285 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC2.96□□□□□ -1.94
CDH6P55285 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC2.96□□□□□ -1.94
CDH6P55285 YWHAZP7-201ENST00000436906 631 ntBASIC2.96□□□□□ -1.94
CDH6P55285 NIPA2P5-201ENST00000452282 464 ntBASIC2.96□□□□□ -1.94
CDH6P55285 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC2.96□□□□□ -1.94
CDH6P55285 RNA5SP310-201ENST00000459084 116 ntBASIC2.96□□□□□ -1.94
CDH6P55285 S100A11P2-201ENST00000467589 312 ntBASIC2.96□□□□□ -1.94
CDH6P55285 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC2.96□□□□□ -1.94
CDH6P55285 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC2.96□□□□□ -1.94
CDH6P55285 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC2.96□□□□□ -1.94
CDH6P55285 AC008127.2-201ENST00000549925 1075 ntBASIC2.96□□□□□ -1.94
CDH6P55285 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC2.96□□□□□ -1.94
CDH6P55285 MTCYBP27-201ENST00000555160 670 ntBASIC2.96□□□□□ -1.94
CDH6P55285 GTF2IP8-201ENST00000560687 584 ntBASIC2.96□□□□□ -1.94
CDH6P55285 AC093510.2-201ENST00000562820 896 ntBASIC2.96□□□□□ -1.94
CDH6P55285 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.96□□□□□ -1.94
CDH6P55285 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC2.96□□□□□ -1.94
CDH6P55285 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.96□□□□□ -1.94
CDH6P55285 AP001542.2-201ENST00000593141 364 ntBASIC2.96□□□□□ -1.94
CDH6P55285 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC2.96□□□□□ -1.94
CDH6P55285 AP003973.1-201ENST00000604639 691 ntBASIC2.96□□□□□ -1.94
CDH6P55285 AC093732.2-201ENST00000607950 274 ntBASIC2.96□□□□□ -1.94
CDH6P55285 AP005229.2-201ENST00000609980 697 ntBASIC2.96□□□□□ -1.94
CDH6P55285 MIR6076-201ENST00000617521 113 ntBASIC2.96□□□□□ -1.94
CDH6P55285 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC2.96□□□□□ -1.94
CDH6P55285 CYP3A51P-201ENST00000633513 256 ntBASIC2.96□□□□□ -1.94
CDH6P55285 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
CDH6P55285 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
CDH6P55285 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
CDH6P55285 SNORA9-201ENST00000384215 133 ntBASIC2.95□□□□□ -1.94
CDH6P55285 FAT1P1-201ENST00000406588 507 ntBASIC2.95□□□□□ -1.94
CDH6P55285 RNA5SP38-201ENST00000410750 119 ntBASIC2.95□□□□□ -1.94
CDH6P55285 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC2.95□□□□□ -1.94
CDH6P55285 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC2.95□□□□□ -1.94
CDH6P55285 ATG3P1-201ENST00000419507 911 ntBASIC2.95□□□□□ -1.94
CDH6P55285 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC2.95□□□□□ -1.94
CDH6P55285 AC109583.1-201ENST00000432156 268 ntBASIC2.95□□□□□ -1.94
CDH6P55285 RPS20P5-201ENST00000434808 360 ntBASIC2.95□□□□□ -1.94
CDH6P55285 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC2.95□□□□□ -1.94
CDH6P55285 KLRA1P-201ENST00000503499 986 ntBASIC2.95□□□□□ -1.94
CDH6P55285 BOLA3P3-201ENST00000505182 232 ntBASIC2.95□□□□□ -1.94
CDH6P55285 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CDH6P55285 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC2.95□□□□□ -1.94
CDH6P55285 RNU6-334P-201ENST00000517072 102 ntBASIC2.95□□□□□ -1.94
CDH6P55285 HPRT1P3-201ENST00000539521 576 ntBASIC2.95□□□□□ -1.94
CDH6P55285 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.95□□□□□ -1.94
CDH6P55285 AC022080.3-201ENST00000544433 482 ntBASIC2.95□□□□□ -1.94
CDH6P55285 AC006116.7-201ENST00000590141 756 ntBASIC2.95□□□□□ -1.94
CDH6P55285 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC2.95□□□□□ -1.94
CDH6P55285 AL161756.2-201ENST00000604597 246 ntBASIC2.95□□□□□ -1.94
CDH6P55285 AC106900.2-201ENST00000604994 317 ntBASIC2.95□□□□□ -1.94
CDH6P55285 AL512506.1-201ENST00000613918 449 ntBASIC2.95□□□□□ -1.94
CDH6P55285 VN1R7P-201ENST00000619242 903 ntBASIC2.95□□□□□ -1.94
CDH6P55285 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.95□□□□□ -1.94
CDH6P55285 AC009487.2-201ENST00000420969 6821 ntBASIC2.95□□□□□ -1.94
CDH6P55285 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CDH6P55285 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CDH6P55285 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CDH6P55285 MTCO1P23-201ENST00000415223 1526 ntBASIC2.94□□□□□ -1.94
CDH6P55285 AL161431.1-201ENST00000618966 4205 ntBASIC2.94□□□□□ -1.94
CDH6P55285 AC092593.1-201ENST00000515413 1815 ntBASIC2.94□□□□□ -1.94
CDH6P55285 GABRG2-229ENST00000641017 3628 ntBASIC2.94□□□□□ -1.94
CDH6P55285 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.94□□□□□ -1.94
CDH6P55285 RNU5D-1-201ENST00000363299 116 ntBASIC2.94□□□□□ -1.94
CDH6P55285 SNORA14A-201ENST00000364773 135 ntBASIC2.94□□□□□ -1.94
CDH6P55285 RNU6-468P-201ENST00000384003 109 ntBASIC2.94□□□□□ -1.94
CDH6P55285 MIR217-201ENST00000384817 110 ntBASIC2.94□□□□□ -1.94
CDH6P55285 MIR181B1-201ENST00000385240 110 ntBASIC2.94□□□□□ -1.94
CDH6P55285 RPL22P22-201ENST00000395439 379 ntBASIC2.94□□□□□ -1.94
CDH6P55285 AC016769.3-201ENST00000396562 315 ntBASIC2.94□□□□□ -1.94
CDH6P55285 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC2.94□□□□□ -1.94
CDH6P55285 SSXP9-201ENST00000417503 292 ntBASIC2.94□□□□□ -1.94
CDH6P55285 BOLA3P4-201ENST00000418151 400 ntBASIC2.94□□□□□ -1.94
CDH6P55285 AC092634.6-201ENST00000418558 192 ntBASIC2.94□□□□□ -1.94
CDH6P55285 AC093151.1-201ENST00000427711 313 ntBASIC2.94□□□□□ -1.94
CDH6P55285 MTCYBP15-201ENST00000433123 1127 ntBASIC2.94□□□□□ -1.94
CDH6P55285 AC004866.2-201ENST00000438285 481 ntBASIC2.94□□□□□ -1.94
CDH6P55285 AC000041.1-201ENST00000439655 175 ntBASIC2.94□□□□□ -1.94
CDH6P55285 AC093156.1-201ENST00000440382 670 ntBASIC2.94□□□□□ -1.94
CDH6P55285 NANOGNBP1-201ENST00000448444 480 ntBASIC2.94□□□□□ -1.94
CDH6P55285 RPS29P26-201ENST00000477483 171 ntBASIC2.94□□□□□ -1.94
CDH6P55285 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms