Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 SNRPGP3-201ENST00000469405 227 ntBASIC3.92□□□□□ -1.78
NR1H2P55055 RPL23AP41-201ENST00000484754 458 ntBASIC3.92□□□□□ -1.78
NR1H2P55055 AC010424.1-201ENST00000506336 297 ntBASIC3.92□□□□□ -1.78
NR1H2P55055 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC3.92□□□□□ -1.78
NR1H2P55055 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC3.92□□□□□ -1.78
NR1H2P55055 CYCSP29-201ENST00000533731 318 ntBASIC3.92□□□□□ -1.78
NR1H2P55055 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.92□□□□□ -1.78
NR1H2P55055 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC3.92□□□□□ -1.78
NR1H2P55055 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.92□□□□□ -1.78
NR1H2P55055 AC012414.6-201ENST00000568241 401 ntBASIC3.92□□□□□ -1.78
NR1H2P55055 AC007599.1-201ENST00000568688 1174 ntBASIC3.92□□□□□ -1.78
NR1H2P55055 MIR3921-201ENST00000577308 85 ntBASIC3.92□□□□□ -1.78
NR1H2P55055 TPMTP1-201ENST00000592307 737 ntBASIC3.92□□□□□ -1.78
NR1H2P55055 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.92□□□□□ -1.78
NR1H2P55055 AC239868.4-201ENST00000608318 671 ntBASIC3.92□□□□□ -1.78
NR1H2P55055 AC024941.1-201ENST00000612250 334 ntBASIC3.92□□□□□ -1.78
NR1H2P55055 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
NR1H2P55055 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.92□□□□□ -1.78
NR1H2P55055 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.92□□□□□ -1.78
NR1H2P55055 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
NR1H2P55055 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
NR1H2P55055 EXOC5P1-201ENST00000510543 1969 ntBASIC3.92□□□□□ -1.78
NR1H2P55055 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
NR1H2P55055 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
NR1H2P55055 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
NR1H2P55055 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC3.91□□□□□ -1.78
NR1H2P55055 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
NR1H2P55055 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
NR1H2P55055 AC009812.4-201ENST00000569134 1805 ntBASIC3.91□□□□□ -1.78
NR1H2P55055 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
NR1H2P55055 RNU5F-6P-201ENST00000362979 116 ntBASIC3.91□□□□□ -1.78
NR1H2P55055 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
NR1H2P55055 AL359837.1-201ENST00000381357 287 ntBASIC3.91□□□□□ -1.78
NR1H2P55055 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC3.91□□□□□ -1.78
NR1H2P55055 RNU6-114P-201ENST00000384704 105 ntBASIC3.91□□□□□ -1.78
NR1H2P55055 MIR659-201ENST00000384963 97 ntBASIC3.91□□□□□ -1.78
NR1H2P55055 MIR134-201ENST00000385258 73 ntBASIC3.91□□□□□ -1.78
NR1H2P55055 RNU6-754P-201ENST00000391166 107 ntBASIC3.91□□□□□ -1.78
NR1H2P55055 RN7SKP142-201ENST00000411236 328 ntBASIC3.91□□□□□ -1.78
NR1H2P55055 RNU6-516P-201ENST00000411381 104 ntBASIC3.91□□□□□ -1.78
NR1H2P55055 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC3.91□□□□□ -1.78
NR1H2P55055 SSXP9-201ENST00000417503 292 ntBASIC3.91□□□□□ -1.78
NR1H2P55055 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
NR1H2P55055 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC3.91□□□□□ -1.78
NR1H2P55055 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC3.91□□□□□ -1.78
NR1H2P55055 RPS29P17-201ENST00000430795 166 ntBASIC3.91□□□□□ -1.78
NR1H2P55055 AL132765.1-201ENST00000434165 553 ntBASIC3.91□□□□□ -1.78
NR1H2P55055 AC024082.2-201ENST00000434771 238 ntBASIC3.91□□□□□ -1.78
NR1H2P55055 SKP1P1-201ENST00000438081 489 ntBASIC3.91□□□□□ -1.78
NR1H2P55055 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC3.91□□□□□ -1.78
NR1H2P55055 AL662791.1-201ENST00000441992 928 ntBASIC3.91□□□□□ -1.78
NR1H2P55055 PHBP16-201ENST00000446318 950 ntBASIC3.91□□□□□ -1.78
NR1H2P55055 SNRPGP9-201ENST00000456025 225 ntBASIC3.91□□□□□ -1.78
NR1H2P55055 RN7SL98P-201ENST00000462271 300 ntBASIC3.91□□□□□ -1.78
NR1H2P55055 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC3.91□□□□□ -1.78
NR1H2P55055 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC3.91□□□□□ -1.78
NR1H2P55055 MIR2116-201ENST00000517221 80 ntBASIC3.91□□□□□ -1.78
NR1H2P55055 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.91□□□□□ -1.78
NR1H2P55055 AP001804.3-201ENST00000525146 880 ntBASIC3.91□□□□□ -1.78
NR1H2P55055 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC3.91□□□□□ -1.78
NR1H2P55055 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.91□□□□□ -1.78
NR1H2P55055 AC024909.2-201ENST00000553035 286 ntBASIC3.91□□□□□ -1.78
NR1H2P55055 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.91□□□□□ -1.78
NR1H2P55055 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.91□□□□□ -1.78
NR1H2P55055 MED28P6-201ENST00000558776 231 ntBASIC3.91□□□□□ -1.78
NR1H2P55055 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.91□□□□□ -1.78
NR1H2P55055 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.91□□□□□ -1.78
NR1H2P55055 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC3.91□□□□□ -1.78
NR1H2P55055 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC3.91□□□□□ -1.78
NR1H2P55055 AC106785.1-201ENST00000565935 262 ntBASIC3.91□□□□□ -1.78
NR1H2P55055 MIR4307-201ENST00000582802 84 ntBASIC3.91□□□□□ -1.78
NR1H2P55055 ABBA01006766.1-201ENST00000584728 294 ntBASIC3.91□□□□□ -1.78
NR1H2P55055 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.91□□□□□ -1.78
NR1H2P55055 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.91□□□□□ -1.78
NR1H2P55055 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.91□□□□□ -1.78
NR1H2P55055 AP000403.1-201ENST00000603349 851 ntBASIC3.91□□□□□ -1.78
NR1H2P55055 AC084782.3-201ENST00000612282 578 ntBASIC3.91□□□□□ -1.78
NR1H2P55055 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC3.91□□□□□ -1.78
NR1H2P55055 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC3.91□□□□□ -1.78
NR1H2P55055 AC092326.2-201ENST00000624772 1561 ntBASIC3.91□□□□□ -1.78
NR1H2P55055 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.91□□□□□ -1.78
NR1H2P55055 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
NR1H2P55055 DDX10P1-201ENST00000448545 1933 ntBASIC3.91□□□□□ -1.78
NR1H2P55055 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
NR1H2P55055 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
NR1H2P55055 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.9□□□□□ -1.78
NR1H2P55055 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
NR1H2P55055 OR5P1P-201ENST00000299512 925 ntBASIC3.9□□□□□ -1.79
NR1H2P55055 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
NR1H2P55055 Y_RNA.97-201ENST00000363094 102 ntBASIC3.9□□□□□ -1.79
NR1H2P55055 SNORA70C-201ENST00000384538 135 ntBASIC3.9□□□□□ -1.79
NR1H2P55055 U8.14-201ENST00000390843 143 ntBASIC3.9□□□□□ -1.79
NR1H2P55055 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC3.9□□□□□ -1.79
NR1H2P55055 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.9□□□□□ -1.79
NR1H2P55055 MTATP6P4-201ENST00000427725 675 ntBASIC3.9□□□□□ -1.79
NR1H2P55055 AC109583.1-201ENST00000432156 268 ntBASIC3.9□□□□□ -1.79
NR1H2P55055 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC3.9□□□□□ -1.79
NR1H2P55055 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC3.9□□□□□ -1.79
NR1H2P55055 AC114495.1-201ENST00000441274 436 ntBASIC3.9□□□□□ -1.79
NR1H2P55055 MTCO2P7-201ENST00000446518 666 ntBASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms