Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 CDR1-202ENST00000625883 1485 ntBASIC3.41□□□□□ -1.86
LIMK2P53671 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
LIMK2P53671 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
LIMK2P53671 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
LIMK2P53671 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
LIMK2P53671 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.41□□□□□ -1.86
LIMK2P53671 NACA3P-201ENST00000359690 648 ntBASIC3.41□□□□□ -1.86
LIMK2P53671 RNU4-35P-201ENST00000362588 141 ntBASIC3.41□□□□□ -1.86
LIMK2P53671 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.41□□□□□ -1.86
LIMK2P53671 AC016769.3-201ENST00000396562 315 ntBASIC3.41□□□□□ -1.86
LIMK2P53671 ARF4P3-201ENST00000397387 509 ntBASIC3.41□□□□□ -1.86
LIMK2P53671 AL583834.1-201ENST00000406943 343 ntBASIC3.41□□□□□ -1.86
LIMK2P53671 RNU4-78P-201ENST00000410940 126 ntBASIC3.41□□□□□ -1.86
LIMK2P53671 AL356968.1-201ENST00000416622 474 ntBASIC3.41□□□□□ -1.86
LIMK2P53671 AC090960.1-201ENST00000421072 306 ntBASIC3.41□□□□□ -1.86
LIMK2P53671 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
LIMK2P53671 VN1R108P-201ENST00000431580 830 ntBASIC3.41□□□□□ -1.86
LIMK2P53671 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.41□□□□□ -1.86
LIMK2P53671 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.41□□□□□ -1.86
LIMK2P53671 HMGB3P8-201ENST00000449709 577 ntBASIC3.41□□□□□ -1.86
LIMK2P53671 HMGN1P18-201ENST00000457642 277 ntBASIC3.41□□□□□ -1.86
LIMK2P53671 RPS4XP10-201ENST00000465034 731 ntBASIC3.41□□□□□ -1.86
LIMK2P53671 AC092757.1-201ENST00000467293 467 ntBASIC3.41□□□□□ -1.86
LIMK2P53671 SNRPGP3-201ENST00000469405 227 ntBASIC3.41□□□□□ -1.86
LIMK2P53671 AC025518.1-201ENST00000479856 347 ntBASIC3.41□□□□□ -1.86
LIMK2P53671 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.41□□□□□ -1.86
LIMK2P53671 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.41□□□□□ -1.86
LIMK2P53671 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.41□□□□□ -1.86
LIMK2P53671 MTCO1P47-201ENST00000523889 1271 ntBASIC3.41□□□□□ -1.86
LIMK2P53671 AC005832.3-201ENST00000537929 631 ntBASIC3.41□□□□□ -1.86
LIMK2P53671 AC037471.2-201ENST00000564941 598 ntBASIC3.41□□□□□ -1.86
LIMK2P53671 AC124312.4-201ENST00000605533 310 ntBASIC3.41□□□□□ -1.86
LIMK2P53671 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
LIMK2P53671 AC107075.1-201ENST00000613695 314 ntBASIC3.41□□□□□ -1.86
LIMK2P53671 AC120349.2-201ENST00000625002 298 ntBASIC3.41□□□□□ -1.86
LIMK2P53671 CYP3A51P-201ENST00000633513 256 ntBASIC3.41□□□□□ -1.86
LIMK2P53671 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.41□□□□□ -1.86
LIMK2P53671 NUP58P1-201ENST00000502546 1738 ntBASIC3.41□□□□□ -1.86
LIMK2P53671 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
LIMK2P53671 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
LIMK2P53671 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.4□□□□□ -1.86
LIMK2P53671 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
LIMK2P53671 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
LIMK2P53671 RNU6-560P-201ENST00000364007 108 ntBASIC3.4□□□□□ -1.87
LIMK2P53671 RNU6-821P-201ENST00000390995 107 ntBASIC3.4□□□□□ -1.87
LIMK2P53671 RSL24D1P4-201ENST00000400938 484 ntBASIC3.4□□□□□ -1.87
LIMK2P53671 TOMM22P1-201ENST00000418578 312 ntBASIC3.4□□□□□ -1.87
LIMK2P53671 AL049610.1-201ENST00000423374 372 ntBASIC3.4□□□□□ -1.87
LIMK2P53671 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC3.4□□□□□ -1.87
LIMK2P53671 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.4□□□□□ -1.87
LIMK2P53671 KATNBL1P3-201ENST00000443475 909 ntBASIC3.4□□□□□ -1.87
LIMK2P53671 MTCO2P25-201ENST00000447065 681 ntBASIC3.4□□□□□ -1.87
LIMK2P53671 RPL26P28-201ENST00000451325 435 ntBASIC3.4□□□□□ -1.87
LIMK2P53671 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
LIMK2P53671 CFTRP1-201ENST00000456646 183 ntBASIC3.4□□□□□ -1.87
LIMK2P53671 BX510359.1-201ENST00000456973 237 ntBASIC3.4□□□□□ -1.87
LIMK2P53671 RPS20P24-201ENST00000457473 361 ntBASIC3.4□□□□□ -1.87
LIMK2P53671 RN7SL807P-201ENST00000470923 297 ntBASIC3.4□□□□□ -1.87
LIMK2P53671 RN7SL442P-201ENST00000473804 320 ntBASIC3.4□□□□□ -1.87
LIMK2P53671 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
LIMK2P53671 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
LIMK2P53671 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.4□□□□□ -1.87
LIMK2P53671 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.4□□□□□ -1.87
LIMK2P53671 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
LIMK2P53671 CA1-215ENST00000522389 551 ntTSL 3 BASIC3.4□□□□□ -1.87
LIMK2P53671 AP004371.1-201ENST00000525240 214 ntBASIC3.4□□□□□ -1.87
LIMK2P53671 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC3.4□□□□□ -1.87
LIMK2P53671 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC3.4□□□□□ -1.87
LIMK2P53671 HIGD1AP17-201ENST00000554576 276 ntBASIC3.4□□□□□ -1.87
LIMK2P53671 ZNF192P1-203ENST00000565888 810 ntBASIC3.4□□□□□ -1.87
LIMK2P53671 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.4□□□□□ -1.87
LIMK2P53671 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.4□□□□□ -1.87
LIMK2P53671 ZNF415P1-201ENST00000582279 1166 ntBASIC3.4□□□□□ -1.87
LIMK2P53671 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.4□□□□□ -1.87
LIMK2P53671 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.4□□□□□ -1.87
LIMK2P53671 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.4□□□□□ -1.87
LIMK2P53671 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.4□□□□□ -1.87
LIMK2P53671 AC110760.3-201ENST00000598794 467 ntBASIC3.4□□□□□ -1.87
LIMK2P53671 BNIP3P26-201ENST00000600827 554 ntBASIC3.4□□□□□ -1.87
LIMK2P53671 AC103881.1-201ENST00000603476 538 ntBASIC3.4□□□□□ -1.87
LIMK2P53671 AC009090.3-201ENST00000616553 565 ntBASIC3.4□□□□□ -1.87
LIMK2P53671 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
LIMK2P53671 AF127577.6-201ENST00000623352 2191 ntBASIC3.4□□□□□ -1.87
LIMK2P53671 AC139792.2-201ENST00000624218 587 ntBASIC3.4□□□□□ -1.87
LIMK2P53671 AC007490.1-201ENST00000624321 703 ntBASIC3.4□□□□□ -1.87
LIMK2P53671 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC3.4□□□□□ -1.87
LIMK2P53671 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.4□□□□□ -1.87
LIMK2P53671 MIR7153-201ENST00000637758 57 ntBASIC3.4□□□□□ -1.87
LIMK2P53671 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.4□□□□□ -1.87
LIMK2P53671 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.4□□□□□ -1.87
LIMK2P53671 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
LIMK2P53671 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.4□□□□□ -1.87
LIMK2P53671 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.4□□□□□ -1.87
LIMK2P53671 MTCO1P23-201ENST00000415223 1526 ntBASIC3.39□□□□□ -1.87
LIMK2P53671 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.39□□□□□ -1.87
LIMK2P53671 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
LIMK2P53671 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
LIMK2P53671 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
LIMK2P53671 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
LIMK2P53671 SNORA51.2-201ENST00000364595 132 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 121.9 ms