Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
COPAP53621 RNA5SP130-201ENST00000364431 114 ntBASIC4.3□□□□□ -1.72
COPAP53621 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
COPAP53621 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
COPAP53621 HSPE1P26-201ENST00000405341 275 ntBASIC4.3□□□□□ -1.72
COPAP53621 Y_RNA.608-201ENST00000410647 95 ntBASIC4.3□□□□□ -1.72
COPAP53621 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.3□□□□□ -1.72
COPAP53621 AC010975.2-201ENST00000427781 588 ntBASIC4.3□□□□□ -1.72
COPAP53621 AL117339.2-201ENST00000430475 180 ntBASIC4.3□□□□□ -1.72
COPAP53621 OR2B8P-201ENST00000432841 938 ntBASIC4.3□□□□□ -1.72
COPAP53621 CYCSP43-201ENST00000438233 310 ntBASIC4.3□□□□□ -1.72
COPAP53621 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
COPAP53621 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.3□□□□□ -1.72
COPAP53621 FABP3P2-201ENST00000453169 399 ntBASIC4.3□□□□□ -1.72
COPAP53621 RPL23AP81-201ENST00000455252 467 ntBASIC4.3□□□□□ -1.72
COPAP53621 AC099563.1-201ENST00000456086 418 ntBASIC4.3□□□□□ -1.72
COPAP53621 KLF3P2-201ENST00000465138 268 ntBASIC4.3□□□□□ -1.72
COPAP53621 AC096751.1-202ENST00000502691 1067 ntBASIC4.3□□□□□ -1.72
COPAP53621 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
COPAP53621 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
COPAP53621 RNU6-1003P-201ENST00000517099 105 ntBASIC4.3□□□□□ -1.72
COPAP53621 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
COPAP53621 AC105233.3-201ENST00000531125 744 ntBASIC4.3□□□□□ -1.72
COPAP53621 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.3□□□□□ -1.72
COPAP53621 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.3□□□□□ -1.72
COPAP53621 AC137800.2-201ENST00000574375 120 ntBASIC4.3□□□□□ -1.72
COPAP53621 IGHV3-29-201ENST00000604817 344 ntBASIC4.3□□□□□ -1.72
COPAP53621 AC055876.5-201ENST00000605667 259 ntBASIC4.3□□□□□ -1.72
COPAP53621 AC109347.2-201ENST00000610220 349 ntBASIC4.3□□□□□ -1.72
COPAP53621 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC4.3□□□□□ -1.72
COPAP53621 AL590099.1-201ENST00000615276 138 ntBASIC4.3□□□□□ -1.72
COPAP53621 AC233309.1-201ENST00000619522 751 ntBASIC4.3□□□□□ -1.72
COPAP53621 AC103858.2-201ENST00000621471 543 ntBASIC4.3□□□□□ -1.72
COPAP53621 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC4.3□□□□□ -1.72
COPAP53621 AC008013.2-202ENST00000637965 364 ntBASIC4.3□□□□□ -1.72
COPAP53621 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.3□□□□□ -1.72
COPAP53621 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
COPAP53621 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.3□□□□□ -1.72
COPAP53621 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.3□□□□□ -1.72
COPAP53621 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
COPAP53621 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
COPAP53621 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.29□□□□□ -1.72
COPAP53621 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.29□□□□□ -1.72
COPAP53621 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
COPAP53621 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
COPAP53621 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
COPAP53621 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
COPAP53621 SNORA51.2-201ENST00000364595 132 ntBASIC4.29□□□□□ -1.72
COPAP53621 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
COPAP53621 RNU6-837P-201ENST00000391056 108 ntBASIC4.29□□□□□ -1.72
COPAP53621 RPS20P2-201ENST00000402520 389 ntBASIC4.29□□□□□ -1.72
COPAP53621 AL445189.1-201ENST00000405722 338 ntBASIC4.29□□□□□ -1.72
COPAP53621 RNU6-628P-201ENST00000410675 107 ntBASIC4.29□□□□□ -1.72
COPAP53621 MIR1911-201ENST00000410783 80 ntBASIC4.29□□□□□ -1.72
COPAP53621 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.29□□□□□ -1.72
COPAP53621 EIF1P3-201ENST00000423841 334 ntBASIC4.29□□□□□ -1.72
COPAP53621 MRPS18BP2-201ENST00000434310 759 ntBASIC4.29□□□□□ -1.72
COPAP53621 AL022238.1-201ENST00000442557 355 ntBASIC4.29□□□□□ -1.72
COPAP53621 AC244505.5-201ENST00000443639 207 ntBASIC4.29□□□□□ -1.72
COPAP53621 AC112653.1-201ENST00000443851 386 ntBASIC4.29□□□□□ -1.72
COPAP53621 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC4.29□□□□□ -1.72
COPAP53621 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC4.29□□□□□ -1.72
COPAP53621 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC4.29□□□□□ -1.72
COPAP53621 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC4.29□□□□□ -1.72
COPAP53621 AP1S2P1-201ENST00000457344 379 ntBASIC4.29□□□□□ -1.72
COPAP53621 snoU13.3-201ENST00000459441 104 ntBASIC4.29□□□□□ -1.72
COPAP53621 AC021382.1-201ENST00000483523 359 ntBASIC4.29□□□□□ -1.72
COPAP53621 AC138853.1-201ENST00000503549 823 ntBASIC4.29□□□□□ -1.72
COPAP53621 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.29□□□□□ -1.72
COPAP53621 AC017037.1-201ENST00000508460 471 ntBASIC4.29□□□□□ -1.72
COPAP53621 MTND1P5-201ENST00000517906 940 ntBASIC4.29□□□□□ -1.72
COPAP53621 AC027807.1-201ENST00000559921 996 ntBASIC4.29□□□□□ -1.72
COPAP53621 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.29□□□□□ -1.72
COPAP53621 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC4.29□□□□□ -1.72
COPAP53621 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.29□□□□□ -1.72
COPAP53621 AL359999.1-201ENST00000604513 294 ntBASIC4.29□□□□□ -1.72
COPAP53621 AC108747.1-201ENST00000609508 535 ntBASIC4.29□□□□□ -1.72
COPAP53621 AC138749.5-201ENST00000611461 208 ntBASIC4.29□□□□□ -1.72
COPAP53621 AP001506.1-201ENST00000615444 211 ntBASIC4.29□□□□□ -1.72
COPAP53621 AC116165.2-201ENST00000616705 206 ntBASIC4.29□□□□□ -1.72
COPAP53621 AC019278.1-201ENST00000623516 479 ntBASIC4.29□□□□□ -1.72
COPAP53621 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC4.29□□□□□ -1.72
COPAP53621 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC4.29□□□□□ -1.72
COPAP53621 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.29□□□□□ -1.72
COPAP53621 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC4.29□□□□□ -1.72
COPAP53621 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.29□□□□□ -1.72
COPAP53621 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.29□□□□□ -1.72
COPAP53621 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.29□□□□□ -1.72
COPAP53621 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
COPAP53621 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
COPAP53621 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
COPAP53621 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
COPAP53621 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.28□□□□□ -1.72
COPAP53621 MAPK10-253ENST00000641010 4072 ntBASIC4.28□□□□□ -1.72
COPAP53621 Y_RNA.6-201ENST00000362350 114 ntBASIC4.28□□□□□ -1.72
COPAP53621 Y_RNA.46-201ENST00000362695 102 ntBASIC4.28□□□□□ -1.72
COPAP53621 RNU6-359P-201ENST00000365466 108 ntBASIC4.28□□□□□ -1.72
COPAP53621 RNU6-517P-201ENST00000384362 110 ntBASIC4.28□□□□□ -1.72
COPAP53621 RNU6-297P-201ENST00000384636 107 ntBASIC4.28□□□□□ -1.72
COPAP53621 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms