Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4□□□□□ -1.77
TUBP50607 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4□□□□□ -1.77
TUBP50607 RNU6-223P-201ENST00000362830 107 ntBASIC4□□□□□ -1.77
TUBP50607 RNU6-777P-201ENST00000364265 104 ntBASIC4□□□□□ -1.77
TUBP50607 RNU6-1078P-201ENST00000364522 103 ntBASIC4□□□□□ -1.77
TUBP50607 MIR135A2-201ENST00000384854 100 ntBASIC4□□□□□ -1.77
TUBP50607 HMGN2P8-201ENST00000391458 268 ntBASIC4□□□□□ -1.77
TUBP50607 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC4□□□□□ -1.77
TUBP50607 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4□□□□□ -1.77
TUBP50607 MTND2P18-201ENST00000419962 1030 ntBASIC4□□□□□ -1.77
TUBP50607 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC4□□□□□ -1.77
TUBP50607 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC4□□□□□ -1.77
TUBP50607 RPS27AP14-201ENST00000422868 454 ntBASIC4□□□□□ -1.77
TUBP50607 AC087650.1-201ENST00000431445 468 ntBASIC4□□□□□ -1.77
TUBP50607 RSU1P2-202ENST00000437884 485 ntBASIC4□□□□□ -1.77
TUBP50607 RPS17P13-201ENST00000448974 407 ntBASIC4□□□□□ -1.77
TUBP50607 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4□□□□□ -1.77
TUBP50607 RNU7-125P-201ENST00000458760 62 ntBASIC4□□□□□ -1.77
TUBP50607 AC112198.1-201ENST00000505369 1220 ntBASIC4□□□□□ -1.77
TUBP50607 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC4□□□□□ -1.77
TUBP50607 AC111000.2-201ENST00000507775 550 ntBASIC4□□□□□ -1.77
TUBP50607 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC4□□□□□ -1.77
TUBP50607 MTCO1P47-201ENST00000523889 1271 ntBASIC4□□□□□ -1.77
TUBP50607 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC4□□□□□ -1.77
TUBP50607 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4□□□□□ -1.77
TUBP50607 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC4□□□□□ -1.77
TUBP50607 MTND3P12-201ENST00000559068 328 ntBASIC4□□□□□ -1.77
TUBP50607 AC090888.1-201ENST00000561335 1141 ntBASIC4□□□□□ -1.77
TUBP50607 AC109446.2-201ENST00000567872 497 ntBASIC4□□□□□ -1.77
TUBP50607 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC4□□□□□ -1.77
TUBP50607 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC4□□□□□ -1.77
TUBP50607 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC4□□□□□ -1.77
TUBP50607 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4□□□□□ -1.77
TUBP50607 MIR544B-201ENST00000582372 78 ntBASIC4□□□□□ -1.77
TUBP50607 MIR5187-201ENST00000583479 76 ntBASIC4□□□□□ -1.77
TUBP50607 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC4□□□□□ -1.77
TUBP50607 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC4□□□□□ -1.77
TUBP50607 MTCYBP22-201ENST00000603788 447 ntBASIC4□□□□□ -1.77
TUBP50607 AC068313.1-201ENST00000604028 1008 ntBASIC4□□□□□ -1.77
TUBP50607 CLPTM1LP1-201ENST00000604519 484 ntBASIC4□□□□□ -1.77
TUBP50607 AC106028.5-201ENST00000610332 395 ntBASIC4□□□□□ -1.77
TUBP50607 AL121772.2-201ENST00000614331 297 ntBASIC4□□□□□ -1.77
TUBP50607 AC244258.1-201ENST00000637553 1071 ntBASIC4□□□□□ -1.77
TUBP50607 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4□□□□□ -1.77
TUBP50607 IPO8P1-201ENST00000455509 3109 ntBASIC4□□□□□ -1.77
TUBP50607 AC006378.2-201ENST00000623178 2476 ntBASIC4□□□□□ -1.77
TUBP50607 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
TUBP50607 AC011460.1-201ENST00000636268 1834 ntBASIC4□□□□□ -1.77
TUBP50607 UBE3AP2-201ENST00000429033 2259 ntBASIC4□□□□□ -1.77
TUBP50607 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4□□□□□ -1.77
TUBP50607 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.99□□□□□ -1.77
TUBP50607 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
TUBP50607 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
TUBP50607 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
TUBP50607 DEFB108F-201ENST00000344638 222 ntBASIC3.99□□□□□ -1.77
TUBP50607 RNU6-553P-201ENST00000364047 96 ntBASIC3.99□□□□□ -1.77
TUBP50607 AL359837.1-201ENST00000381357 287 ntBASIC3.99□□□□□ -1.77
TUBP50607 U8.11-201ENST00000384699 133 ntBASIC3.99□□□□□ -1.77
TUBP50607 U8.12-201ENST00000384701 133 ntBASIC3.99□□□□□ -1.77
TUBP50607 RNU6-754P-201ENST00000391166 107 ntBASIC3.99□□□□□ -1.77
TUBP50607 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
TUBP50607 RPL37P21-201ENST00000435890 276 ntBASIC3.99□□□□□ -1.77
TUBP50607 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.99□□□□□ -1.77
TUBP50607 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.99□□□□□ -1.77
TUBP50607 SETD6P1-201ENST00000444575 317 ntBASIC3.99□□□□□ -1.77
TUBP50607 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC3.99□□□□□ -1.77
TUBP50607 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC3.99□□□□□ -1.77
TUBP50607 AC097262.1-201ENST00000452559 548 ntBASIC3.99□□□□□ -1.77
TUBP50607 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC3.99□□□□□ -1.77
TUBP50607 OR6K1P-201ENST00000456766 971 ntBASIC3.99□□□□□ -1.77
TUBP50607 U8.18-201ENST00000459285 133 ntBASIC3.99□□□□□ -1.77
TUBP50607 RNU7-170P-201ENST00000459303 61 ntBASIC3.99□□□□□ -1.77
TUBP50607 RPL9P32-201ENST00000464118 620 ntBASIC3.99□□□□□ -1.77
TUBP50607 ACTR3P3-201ENST00000480448 893 ntBASIC3.99□□□□□ -1.77
TUBP50607 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.99□□□□□ -1.77
TUBP50607 AC118465.1-201ENST00000513820 1271 ntBASIC3.99□□□□□ -1.77
TUBP50607 RNU1-61P-201ENST00000516107 151 ntBASIC3.99□□□□□ -1.77
TUBP50607 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.99□□□□□ -1.77
TUBP50607 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.99□□□□□ -1.77
TUBP50607 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.99□□□□□ -1.77
TUBP50607 DEFB108D-201ENST00000527787 222 ntBASIC3.99□□□□□ -1.77
TUBP50607 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.99□□□□□ -1.77
TUBP50607 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC3.99□□□□□ -1.77
TUBP50607 AL391156.1-201ENST00000554965 554 ntBASIC3.99□□□□□ -1.77
TUBP50607 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.99□□□□□ -1.77
TUBP50607 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC3.99□□□□□ -1.77
TUBP50607 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC3.99□□□□□ -1.77
TUBP50607 AL158211.4-201ENST00000606988 584 ntBASIC3.99□□□□□ -1.77
TUBP50607 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.99□□□□□ -1.77
TUBP50607 CR392039.5-201ENST00000623201 510 ntBASIC3.99□□□□□ -1.77
TUBP50607 AC097655.1-201ENST00000635075 318 ntBASIC3.99□□□□□ -1.77
TUBP50607 AC012442.3-202ENST00000636742 206 ntBASIC3.99□□□□□ -1.77
TUBP50607 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
TUBP50607 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.99□□□□□ -1.77
TUBP50607 AC024560.2-201ENST00000507981 1497 ntBASIC3.98□□□□□ -1.77
TUBP50607 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.98□□□□□ -1.77
TUBP50607 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
TUBP50607 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
TUBP50607 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.98□□□□□ -1.77
TUBP50607 AC005832.2-201ENST00000538921 1430 ntBASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms