Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC1.79□□□□□ -2.12
SNCAP37840 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC1.79□□□□□ -2.12
SNCAP37840 ERHP1-201ENST00000523006 310 ntBASIC1.79□□□□□ -2.12
SNCAP37840 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
SNCAP37840 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
SNCAP37840 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
SNCAP37840 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC1.79□□□□□ -2.12
SNCAP37840 AC009127.3-201ENST00000570531 403 ntBASIC1.79□□□□□ -2.12
SNCAP37840 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.79□□□□□ -2.12
SNCAP37840 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC1.79□□□□□ -2.12
SNCAP37840 MIR5002-201ENST00000584713 97 ntBASIC1.79□□□□□ -2.12
SNCAP37840 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC1.79□□□□□ -2.12
SNCAP37840 AL513477.2-201ENST00000607858 568 ntBASIC1.79□□□□□ -2.12
SNCAP37840 AC092954.1-201ENST00000609121 445 ntBASIC1.79□□□□□ -2.12
SNCAP37840 AC046143.2-201ENST00000609789 160 ntBASIC1.79□□□□□ -2.12
SNCAP37840 AC245884.12-201ENST00000615364 59 ntBASIC1.79□□□□□ -2.12
SNCAP37840 AC011472.4-201ENST00000615848 491 ntBASIC1.79□□□□□ -2.12
SNCAP37840 AC009159.1-201ENST00000618386 642 ntBASIC1.79□□□□□ -2.12
SNCAP37840 AP003485.2-201ENST00000623636 610 ntBASIC1.79□□□□□ -2.12
SNCAP37840 MIR203B-201ENST00000636080 86 ntBASIC1.79□□□□□ -2.12
SNCAP37840 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
SNCAP37840 CENPCP1-201ENST00000533085 2578 ntBASIC1.79□□□□□ -2.12
SNCAP37840 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
SNCAP37840 AC090740.1-201ENST00000623193 2262 ntBASIC1.78□□□□□ -2.12
SNCAP37840 Z99496.1-201ENST00000469424 1477 ntBASIC1.78□□□□□ -2.12
SNCAP37840 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
SNCAP37840 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
SNCAP37840 AL355497.1-201ENST00000406262 551 ntBASIC1.78□□□□□ -2.12
SNCAP37840 HMGB1P11-201ENST00000413899 637 ntBASIC1.78□□□□□ -2.12
SNCAP37840 NUP35P2-201ENST00000416748 943 ntBASIC1.78□□□□□ -2.12
SNCAP37840 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC1.78□□□□□ -2.12
SNCAP37840 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC1.78□□□□□ -2.12
SNCAP37840 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC1.78□□□□□ -2.12
SNCAP37840 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC1.78□□□□□ -2.12
SNCAP37840 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.78□□□□□ -2.12
SNCAP37840 SETP11-201ENST00000473027 690 ntBASIC1.78□□□□□ -2.12
SNCAP37840 ACTR6P1-201ENST00000514311 1104 ntBASIC1.78□□□□□ -2.12
SNCAP37840 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC1.78□□□□□ -2.12
SNCAP37840 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC1.78□□□□□ -2.12
SNCAP37840 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC1.78□□□□□ -2.12
SNCAP37840 AC105036.1-201ENST00000566222 271 ntBASIC1.78□□□□□ -2.12
SNCAP37840 LRRC37A5P-203ENST00000580181 585 ntBASIC1.78□□□□□ -2.12
SNCAP37840 COX6CP3-201ENST00000580869 223 ntBASIC1.78□□□□□ -2.12
SNCAP37840 MIR3935-201ENST00000583472 104 ntBASIC1.78□□□□□ -2.12
SNCAP37840 MIR4658-201ENST00000584344 65 ntBASIC1.78□□□□□ -2.12
SNCAP37840 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC1.78□□□□□ -2.12
SNCAP37840 AL359535.1-201ENST00000612100 1087 ntBASIC1.78□□□□□ -2.12
SNCAP37840 CTSLP2-204ENST00000629029 392 ntBASIC1.78□□□□□ -2.12
SNCAP37840 PSMD5-AS1-215ENST00000640622 205 ntBASIC1.78□□□□□ -2.12
SNCAP37840 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.78□□□□□ -2.12
SNCAP37840 AC004944.1-201ENST00000517807 3059 ntBASIC1.77□□□□□ -2.13
SNCAP37840 SNORA80A-201ENST00000363922 136 ntBASIC1.77□□□□□ -2.13
SNCAP37840 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
SNCAP37840 RPL21P32-201ENST00000419877 477 ntBASIC1.77□□□□□ -2.13
SNCAP37840 OR6C71P-201ENST00000432580 913 ntBASIC1.77□□□□□ -2.13
SNCAP37840 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC1.77□□□□□ -2.13
SNCAP37840 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.77□□□□□ -2.13
SNCAP37840 MTCYBP29-201ENST00000436327 1006 ntBASIC1.77□□□□□ -2.13
SNCAP37840 AL831737.1-201ENST00000441288 271 ntBASIC1.77□□□□□ -2.13
SNCAP37840 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC1.77□□□□□ -2.13
SNCAP37840 AL139109.1-201ENST00000455491 297 ntBASIC1.77□□□□□ -2.13
SNCAP37840 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC1.77□□□□□ -2.13
SNCAP37840 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC1.77□□□□□ -2.13
SNCAP37840 AC010285.1-201ENST00000470580 392 ntBASIC1.77□□□□□ -2.13
SNCAP37840 SYPL1P1-201ENST00000473622 768 ntBASIC1.77□□□□□ -2.13
SNCAP37840 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC1.77□□□□□ -2.13
SNCAP37840 AC008427.1-201ENST00000503102 655 ntBASIC1.77□□□□□ -2.13
SNCAP37840 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC1.77□□□□□ -2.13
SNCAP37840 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC1.77□□□□□ -2.13
SNCAP37840 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC1.77□□□□□ -2.13
SNCAP37840 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC1.77□□□□□ -2.13
SNCAP37840 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC1.77□□□□□ -2.13
SNCAP37840 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC1.77□□□□□ -2.13
SNCAP37840 OR11H5P-201ENST00000554039 926 ntBASIC1.77□□□□□ -2.13
SNCAP37840 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC1.77□□□□□ -2.13
SNCAP37840 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC1.77□□□□□ -2.13
SNCAP37840 AC090616.3-201ENST00000582184 217 ntBASIC1.77□□□□□ -2.13
SNCAP37840 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC1.77□□□□□ -2.13
SNCAP37840 PCNAP1-202ENST00000595299 752 ntBASIC1.77□□□□□ -2.13
SNCAP37840 AC008739.2-201ENST00000597006 317 ntBASIC1.77□□□□□ -2.13
SNCAP37840 AC026790.2-201ENST00000606282 430 ntBASIC1.77□□□□□ -2.13
SNCAP37840 AC107294.1-201ENST00000609524 467 ntBASIC1.77□□□□□ -2.13
SNCAP37840 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
SNCAP37840 AC015726.3-201ENST00000624501 418 ntBASIC1.77□□□□□ -2.13
SNCAP37840 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC1.77□□□□□ -2.13
SNCAP37840 KPNA2P1-201ENST00000458289 1591 ntBASIC1.76□□□□□ -2.13
SNCAP37840 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC1.76□□□□□ -2.13
SNCAP37840 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC1.76□□□□□ -2.13
SNCAP37840 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.76□□□□□ -2.13
SNCAP37840 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.76□□□□□ -2.13
SNCAP37840 FTLP6-201ENST00000355274 422 ntBASIC1.76□□□□□ -2.13
SNCAP37840 RNA5SP160-201ENST00000364866 120 ntBASIC1.76□□□□□ -2.13
SNCAP37840 SNORA70.4-201ENST00000365509 134 ntBASIC1.76□□□□□ -2.13
SNCAP37840 RNU6-1072P-201ENST00000384703 107 ntBASIC1.76□□□□□ -2.13
SNCAP37840 RNU6-443P-201ENST00000384780 107 ntBASIC1.76□□□□□ -2.13
SNCAP37840 SNORA48.3-201ENST00000391081 134 ntBASIC1.76□□□□□ -2.13
SNCAP37840 RNA5SP252-201ENST00000391131 119 ntBASIC1.76□□□□□ -2.13
SNCAP37840 AP002784.2-201ENST00000397300 549 ntBASIC1.76□□□□□ -2.13
SNCAP37840 ATF1P1-201ENST00000406040 927 ntBASIC1.76□□□□□ -2.13
SNCAP37840 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms