Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 RNA5SP468-201ENST00000516782 93 ntBASIC3.29□□□□□ -1.88
TRIM23P36406 SNORA70.24-201ENST00000517233 118 ntBASIC3.29□□□□□ -1.88
TRIM23P36406 SNORA31.26-201ENST00000517250 137 ntBASIC3.29□□□□□ -1.88
TRIM23P36406 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.29□□□□□ -1.88
TRIM23P36406 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.29□□□□□ -1.88
TRIM23P36406 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.29□□□□□ -1.88
TRIM23P36406 HSPA8P13-201ENST00000523715 472 ntBASIC3.29□□□□□ -1.88
TRIM23P36406 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC3.29□□□□□ -1.88
TRIM23P36406 EEF1B2P4-201ENST00000551398 348 ntBASIC3.29□□□□□ -1.88
TRIM23P36406 AC087481.2-201ENST00000565492 330 ntBASIC3.29□□□□□ -1.88
TRIM23P36406 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.29□□□□□ -1.88
TRIM23P36406 OR4K7P-201ENST00000580232 945 ntBASIC3.29□□□□□ -1.88
TRIM23P36406 MIR4506-201ENST00000584693 77 ntBASIC3.29□□□□□ -1.88
TRIM23P36406 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC3.29□□□□□ -1.88
TRIM23P36406 AC009220.3-201ENST00000604318 586 ntBASIC3.29□□□□□ -1.88
TRIM23P36406 AC080013.4-201ENST00000607624 649 ntBASIC3.29□□□□□ -1.88
TRIM23P36406 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.29□□□□□ -1.88
TRIM23P36406 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC3.29□□□□□ -1.88
TRIM23P36406 AL050303.3-201ENST00000613704 284 ntBASIC3.29□□□□□ -1.88
TRIM23P36406 AC009464.1-201ENST00000615731 469 ntBASIC3.29□□□□□ -1.88
TRIM23P36406 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.29□□□□□ -1.88
TRIM23P36406 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC3.29□□□□□ -1.88
TRIM23P36406 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC3.29□□□□□ -1.88
TRIM23P36406 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
TRIM23P36406 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
TRIM23P36406 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.88
TRIM23P36406 MTND5P7-201ENST00000413558 1798 ntBASIC3.28□□□□□ -1.88
TRIM23P36406 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.28□□□□□ -1.88
TRIM23P36406 RNU6-805P-201ENST00000365643 106 ntBASIC3.28□□□□□ -1.88
TRIM23P36406 RNU6-636P-201ENST00000384598 107 ntBASIC3.28□□□□□ -1.88
TRIM23P36406 MIR491-201ENST00000384877 84 ntBASIC3.28□□□□□ -1.88
TRIM23P36406 RNU4-47P-201ENST00000410876 114 ntBASIC3.28□□□□□ -1.88
TRIM23P36406 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.28□□□□□ -1.88
TRIM23P36406 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.28□□□□□ -1.88
TRIM23P36406 AC126124.2-201ENST00000413542 321 ntBASIC3.28□□□□□ -1.88
TRIM23P36406 NDUFB4P5-201ENST00000415445 361 ntBASIC3.28□□□□□ -1.88
TRIM23P36406 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
TRIM23P36406 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.28□□□□□ -1.88
TRIM23P36406 MTND4P6-201ENST00000438297 472 ntBASIC3.28□□□□□ -1.88
TRIM23P36406 AC092427.1-201ENST00000439177 601 ntBASIC3.28□□□□□ -1.88
TRIM23P36406 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC3.28□□□□□ -1.88
TRIM23P36406 RPL23AP76-201ENST00000441860 458 ntBASIC3.28□□□□□ -1.88
TRIM23P36406 RPL39P6-201ENST00000448289 150 ntBASIC3.28□□□□□ -1.88
TRIM23P36406 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.28□□□□□ -1.88
TRIM23P36406 RPL7P38-201ENST00000488396 739 ntBASIC3.28□□□□□ -1.88
TRIM23P36406 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC3.28□□□□□ -1.88
TRIM23P36406 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC3.28□□□□□ -1.88
TRIM23P36406 AC020893.1-201ENST00000502452 580 ntBASIC3.28□□□□□ -1.88
TRIM23P36406 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC3.28□□□□□ -1.88
TRIM23P36406 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.28□□□□□ -1.88
TRIM23P36406 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.28□□□□□ -1.88
TRIM23P36406 AC079395.1-201ENST00000510981 262 ntBASIC3.28□□□□□ -1.88
TRIM23P36406 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.28□□□□□ -1.88
TRIM23P36406 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.28□□□□□ -1.88
TRIM23P36406 AC008837.2-201ENST00000513076 418 ntBASIC3.28□□□□□ -1.88
TRIM23P36406 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.28□□□□□ -1.88
TRIM23P36406 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC3.28□□□□□ -1.88
TRIM23P36406 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.28□□□□□ -1.88
TRIM23P36406 RPL21P12-201ENST00000559810 515 ntBASIC3.28□□□□□ -1.88
TRIM23P36406 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.28□□□□□ -1.88
TRIM23P36406 MIR5680-201ENST00000577577 84 ntBASIC3.28□□□□□ -1.88
TRIM23P36406 MIR4637-201ENST00000582405 84 ntBASIC3.28□□□□□ -1.88
TRIM23P36406 AC245036.5-201ENST00000596330 847 ntBASIC3.28□□□□□ -1.88
TRIM23P36406 AL606834.2-201ENST00000602954 668 ntBASIC3.28□□□□□ -1.88
TRIM23P36406 AC004987.4-201ENST00000603383 338 ntBASIC3.28□□□□□ -1.88
TRIM23P36406 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
TRIM23P36406 AP001002.2-201ENST00000625137 386 ntBASIC3.28□□□□□ -1.88
TRIM23P36406 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.28□□□□□ -1.88
TRIM23P36406 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.28□□□□□ -1.88
TRIM23P36406 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
TRIM23P36406 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
TRIM23P36406 AL390862.1-201ENST00000635467 1469 ntBASIC3.28□□□□□ -1.88
TRIM23P36406 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.28□□□□□ -1.89
TRIM23P36406 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
TRIM23P36406 AC103988.1-201ENST00000566382 2177 ntBASIC3.27□□□□□ -1.89
TRIM23P36406 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.27□□□□□ -1.89
TRIM23P36406 AL049780.3-201ENST00000624612 1583 ntBASIC3.27□□□□□ -1.89
TRIM23P36406 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.27□□□□□ -1.89
TRIM23P36406 SNORA38.1-201ENST00000364172 131 ntBASIC3.27□□□□□ -1.89
TRIM23P36406 Y_RNA.465-201ENST00000384293 102 ntBASIC3.27□□□□□ -1.89
TRIM23P36406 RNU6-878P-201ENST00000384578 110 ntBASIC3.27□□□□□ -1.89
TRIM23P36406 U3.29-201ENST00000391296 212 ntBASIC3.27□□□□□ -1.89
TRIM23P36406 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
TRIM23P36406 HMGB1P17-201ENST00000403495 628 ntBASIC3.27□□□□□ -1.89
TRIM23P36406 AL357075.1-201ENST00000404107 726 ntBASIC3.27□□□□□ -1.89
TRIM23P36406 AL031121.1-201ENST00000406553 254 ntBASIC3.27□□□□□ -1.89
TRIM23P36406 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.27□□□□□ -1.89
TRIM23P36406 HSPE1P1-201ENST00000421494 318 ntBASIC3.27□□□□□ -1.89
TRIM23P36406 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
TRIM23P36406 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC3.27□□□□□ -1.89
TRIM23P36406 SETP8-201ENST00000435341 628 ntBASIC3.27□□□□□ -1.89
TRIM23P36406 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.27□□□□□ -1.89
TRIM23P36406 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC3.27□□□□□ -1.89
TRIM23P36406 MTND2P19-201ENST00000449129 1012 ntBASIC3.27□□□□□ -1.89
TRIM23P36406 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.27□□□□□ -1.89
TRIM23P36406 NECAP1P2-201ENST00000455668 727 ntBASIC3.27□□□□□ -1.89
TRIM23P36406 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC3.27□□□□□ -1.89
TRIM23P36406 AC021205.2-201ENST00000480069 347 ntBASIC3.27□□□□□ -1.89
TRIM23P36406 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.27□□□□□ -1.89
TRIM23P36406 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms