Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 AC007677.1-201ENST00000445757 515 ntBASIC2.78□□□□□ -1.96
SCN4AP35499 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
SCN4AP35499 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC2.78□□□□□ -1.96
SCN4AP35499 HSPE1P18-201ENST00000517602 280 ntBASIC2.78□□□□□ -1.96
SCN4AP35499 AC022790.1-201ENST00000522872 204 ntBASIC2.78□□□□□ -1.96
SCN4AP35499 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC2.78□□□□□ -1.96
SCN4AP35499 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.78□□□□□ -1.96
SCN4AP35499 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.78□□□□□ -1.96
SCN4AP35499 MEG8-218ENST00000556720 456 ntTSL 3 BASIC2.78□□□□□ -1.96
SCN4AP35499 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC2.78□□□□□ -1.96
SCN4AP35499 AC018618.2-201ENST00000604770 446 ntBASIC2.78□□□□□ -1.96
SCN4AP35499 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.78□□□□□ -1.96
SCN4AP35499 Z99496.1-201ENST00000469424 1477 ntBASIC2.78□□□□□ -1.96
SCN4AP35499 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
SCN4AP35499 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
SCN4AP35499 AC013404.1-201ENST00000413068 249 ntBASIC2.77□□□□□ -1.97
SCN4AP35499 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC2.77□□□□□ -1.97
SCN4AP35499 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC2.77□□□□□ -1.97
SCN4AP35499 MTCO1P43-201ENST00000431831 488 ntBASIC2.77□□□□□ -1.97
SCN4AP35499 AC010881.1-201ENST00000433830 235 ntBASIC2.77□□□□□ -1.97
SCN4AP35499 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC2.77□□□□□ -1.97
SCN4AP35499 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC2.77□□□□□ -1.97
SCN4AP35499 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
SCN4AP35499 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC2.77□□□□□ -1.97
SCN4AP35499 IGLVIV-66-1-201ENST00000521832 460 ntBASIC2.77□□□□□ -1.97
SCN4AP35499 CKS1BP7-201ENST00000522230 235 ntBASIC2.77□□□□□ -1.97
SCN4AP35499 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC2.77□□□□□ -1.97
SCN4AP35499 AC087272.1-201ENST00000523624 533 ntBASIC2.77□□□□□ -1.97
SCN4AP35499 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC2.77□□□□□ -1.97
SCN4AP35499 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC2.77□□□□□ -1.97
SCN4AP35499 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC2.77□□□□□ -1.97
SCN4AP35499 AC023043.3-201ENST00000593113 385 ntBASIC2.77□□□□□ -1.97
SCN4AP35499 AC002076.2-201ENST00000617362 122 ntBASIC2.77□□□□□ -1.97
SCN4AP35499 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.77□□□□□ -1.97
SCN4AP35499 AC073592.7-201ENST00000623659 507 ntBASIC2.77□□□□□ -1.97
SCN4AP35499 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
SCN4AP35499 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.77□□□□□ -1.97
SCN4AP35499 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC2.77□□□□□ -1.97
SCN4AP35499 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
SCN4AP35499 AL356292.1-201ENST00000283110 373 ntBASIC2.77□□□□□ -1.97
SCN4AP35499 RPL9P7-201ENST00000330965 580 ntBASIC2.77□□□□□ -1.97
SCN4AP35499 RNA5SP27-201ENST00000363839 119 ntBASIC2.77□□□□□ -1.97
SCN4AP35499 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC2.77□□□□□ -1.97
SCN4AP35499 AL023284.1-201ENST00000403956 276 ntBASIC2.77□□□□□ -1.97
SCN4AP35499 PTGES3P2-201ENST00000407942 482 ntBASIC2.77□□□□□ -1.97
SCN4AP35499 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC2.77□□□□□ -1.97
SCN4AP35499 AL353597.2-202ENST00000434901 373 ntBASIC2.77□□□□□ -1.97
SCN4AP35499 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC2.77□□□□□ -1.97
SCN4AP35499 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC2.77□□□□□ -1.97
SCN4AP35499 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC2.77□□□□□ -1.97
SCN4AP35499 AC006483.1-201ENST00000487308 313 ntBASIC2.77□□□□□ -1.97
SCN4AP35499 FAM92A1P2-202ENST00000504766 877 ntBASIC2.77□□□□□ -1.97
SCN4AP35499 AC117522.2-201ENST00000510049 657 ntBASIC2.77□□□□□ -1.97
SCN4AP35499 TMEM248P1-201ENST00000510579 951 ntBASIC2.77□□□□□ -1.97
SCN4AP35499 SNORD116-26-201ENST00000516006 96 ntBASIC2.77□□□□□ -1.97
SCN4AP35499 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC2.77□□□□□ -1.97
SCN4AP35499 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC2.77□□□□□ -1.97
SCN4AP35499 AC095057.3-201ENST00000567102 1157 ntBASIC2.77□□□□□ -1.97
SCN4AP35499 MIR5007-201ENST00000583098 95 ntBASIC2.77□□□□□ -1.97
SCN4AP35499 NF1P5-201ENST00000588287 448 ntBASIC2.77□□□□□ -1.97
SCN4AP35499 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC2.77□□□□□ -1.97
SCN4AP35499 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.77□□□□□ -1.97
SCN4AP35499 AC116563.2-201ENST00000624751 535 ntBASIC2.77□□□□□ -1.97
SCN4AP35499 AC096656.1-201ENST00000623826 1364 ntBASIC2.77□□□□□ -1.97
SCN4AP35499 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
SCN4AP35499 MAPK10-322ENST00000641485 4530 ntBASIC2.76□□□□□ -1.97
SCN4AP35499 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
SCN4AP35499 RNU1-17P-201ENST00000363022 152 ntBASIC2.76□□□□□ -1.97
SCN4AP35499 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
SCN4AP35499 DEFA7P-201ENST00000382676 285 ntBASIC2.76□□□□□ -1.97
SCN4AP35499 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC2.76□□□□□ -1.97
SCN4AP35499 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC2.76□□□□□ -1.97
SCN4AP35499 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC2.76□□□□□ -1.97
SCN4AP35499 MTND2P30-201ENST00000456663 382 ntBASIC2.76□□□□□ -1.97
SCN4AP35499 NFU1-207ENST00000462320 558 ntTSL 4 BASIC2.76□□□□□ -1.97
SCN4AP35499 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC2.76□□□□□ -1.97
SCN4AP35499 RPL7P5-201ENST00000471472 736 ntBASIC2.76□□□□□ -1.97
SCN4AP35499 VN1R17P-201ENST00000472048 1090 ntBASIC2.76□□□□□ -1.97
SCN4AP35499 SNORA31.13-201ENST00000516624 135 ntBASIC2.76□□□□□ -1.97
SCN4AP35499 HMGB1P41-201ENST00000520234 440 ntBASIC2.76□□□□□ -1.97
SCN4AP35499 MTCYBP20-201ENST00000524239 1129 ntBASIC2.76□□□□□ -1.97
SCN4AP35499 OR4A45P-201ENST00000529954 901 ntBASIC2.76□□□□□ -1.97
SCN4AP35499 GNAI2P1-201ENST00000541815 315 ntBASIC2.76□□□□□ -1.97
SCN4AP35499 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC2.76□□□□□ -1.97
SCN4AP35499 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC2.76□□□□□ -1.97
SCN4AP35499 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.76□□□□□ -1.97
SCN4AP35499 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC2.76□□□□□ -1.97
SCN4AP35499 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC2.76□□□□□ -1.97
SCN4AP35499 AL022099.1-201ENST00000604551 712 ntBASIC2.76□□□□□ -1.97
SCN4AP35499 AC026741.1-201ENST00000605892 482 ntBASIC2.76□□□□□ -1.97
SCN4AP35499 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.76□□□□□ -1.97
SCN4AP35499 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC2.76□□□□□ -1.97
SCN4AP35499 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
SCN4AP35499 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.76□□□□□ -1.97
SCN4AP35499 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.76□□□□□ -1.97
SCN4AP35499 MTCO1P4-201ENST00000520516 1409 ntBASIC2.76□□□□□ -1.97
SCN4AP35499 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC2.76□□□□□ -1.97
SCN4AP35499 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
SCN4AP35499 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
SCN4AP35499 RNU2-17P-201ENST00000410290 190 ntBASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms