Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC2.98□□□□□ -1.93
HOXA9P31269 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.98□□□□□ -1.93
HOXA9P31269 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
HOXA9P31269 MTND5P19-201ENST00000424872 1794 ntBASIC2.98□□□□□ -1.93
HOXA9P31269 AC016716.1-201ENST00000265882 708 ntBASIC2.98□□□□□ -1.93
HOXA9P31269 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.98□□□□□ -1.93
HOXA9P31269 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
HOXA9P31269 MIR525-201ENST00000384978 85 ntBASIC2.98□□□□□ -1.93
HOXA9P31269 RNU6-1000P-201ENST00000391066 106 ntBASIC2.98□□□□□ -1.93
HOXA9P31269 AL603865.2-201ENST00000401679 213 ntBASIC2.98□□□□□ -1.93
HOXA9P31269 U3.42-201ENST00000408746 214 ntBASIC2.98□□□□□ -1.93
HOXA9P31269 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC2.98□□□□□ -1.93
HOXA9P31269 NDUFB4P5-201ENST00000415445 361 ntBASIC2.98□□□□□ -1.93
HOXA9P31269 TAF13P2-201ENST00000416876 286 ntBASIC2.98□□□□□ -1.93
HOXA9P31269 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC2.98□□□□□ -1.93
HOXA9P31269 PAICSP7-201ENST00000419829 962 ntBASIC2.98□□□□□ -1.93
HOXA9P31269 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.98□□□□□ -1.93
HOXA9P31269 AL139413.1-201ENST00000421309 217 ntBASIC2.98□□□□□ -1.93
HOXA9P31269 AC233728.2-201ENST00000425348 757 ntBASIC2.98□□□□□ -1.93
HOXA9P31269 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC2.98□□□□□ -1.93
HOXA9P31269 ARF4P4-201ENST00000439608 520 ntBASIC2.98□□□□□ -1.93
HOXA9P31269 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC2.98□□□□□ -1.93
HOXA9P31269 SEPT14P24-201ENST00000447236 180 ntBASIC2.98□□□□□ -1.93
HOXA9P31269 AC008885.2-201ENST00000509506 930 ntBASIC2.98□□□□□ -1.93
HOXA9P31269 AC006445.2-201ENST00000510061 472 ntBASIC2.98□□□□□ -1.93
HOXA9P31269 AC016065.2-201ENST00000514530 444 ntBASIC2.98□□□□□ -1.93
HOXA9P31269 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC2.98□□□□□ -1.93
HOXA9P31269 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC2.98□□□□□ -1.93
HOXA9P31269 AC087894.1-201ENST00000538359 518 ntBASIC2.98□□□□□ -1.93
HOXA9P31269 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC2.98□□□□□ -1.93
HOXA9P31269 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.98□□□□□ -1.93
HOXA9P31269 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.98□□□□□ -1.93
HOXA9P31269 AC078899.3-201ENST00000599065 212 ntBASIC2.98□□□□□ -1.93
HOXA9P31269 AC008962.1-201ENST00000605729 304 ntBASIC2.98□□□□□ -1.93
HOXA9P31269 AP002802.2-201ENST00000605877 235 ntBASIC2.98□□□□□ -1.93
HOXA9P31269 AC116312.1-201ENST00000606841 314 ntBASIC2.98□□□□□ -1.93
HOXA9P31269 AF129408.1-201ENST00000608767 431 ntBASIC2.98□□□□□ -1.93
HOXA9P31269 AC009269.6-201ENST00000621778 588 ntBASIC2.98□□□□□ -1.93
HOXA9P31269 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC2.98□□□□□ -1.93
HOXA9P31269 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.98□□□□□ -1.93
HOXA9P31269 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC2.98□□□□□ -1.93
HOXA9P31269 BX649567.1-201ENST00000642071 1134 ntBASIC2.98□□□□□ -1.93
HOXA9P31269 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.98□□□□□ -1.93
HOXA9P31269 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
HOXA9P31269 AC046144.1-201ENST00000478559 1853 ntBASIC2.97□□□□□ -1.93
HOXA9P31269 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
HOXA9P31269 RNU4-82P-201ENST00000362443 140 ntBASIC2.97□□□□□ -1.93
HOXA9P31269 RNU6-859P-201ENST00000362728 107 ntBASIC2.97□□□□□ -1.93
HOXA9P31269 PRRC2CP1-201ENST00000404428 159 ntBASIC2.97□□□□□ -1.93
HOXA9P31269 RNA5SP21-201ENST00000410917 96 ntBASIC2.97□□□□□ -1.93
HOXA9P31269 RN7SKP284-201ENST00000411002 343 ntBASIC2.97□□□□□ -1.93
HOXA9P31269 AC096533.1-201ENST00000411645 353 ntBASIC2.97□□□□□ -1.93
HOXA9P31269 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.97□□□□□ -1.93
HOXA9P31269 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC2.97□□□□□ -1.93
HOXA9P31269 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC2.97□□□□□ -1.93
HOXA9P31269 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC2.97□□□□□ -1.93
HOXA9P31269 RNF2P1-201ENST00000442955 1010 ntBASIC2.97□□□□□ -1.93
HOXA9P31269 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC2.97□□□□□ -1.93
HOXA9P31269 UQCRHP3-201ENST00000451503 251 ntBASIC2.97□□□□□ -1.93
HOXA9P31269 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.97□□□□□ -1.93
HOXA9P31269 AC010301.1-201ENST00000473936 355 ntBASIC2.97□□□□□ -1.93
HOXA9P31269 AC087879.1-201ENST00000474343 374 ntBASIC2.97□□□□□ -1.93
HOXA9P31269 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC2.97□□□□□ -1.93
HOXA9P31269 SUMO2P5-201ENST00000506790 245 ntBASIC2.97□□□□□ -1.93
HOXA9P31269 AC017037.2-201ENST00000513850 890 ntBASIC2.97□□□□□ -1.93
HOXA9P31269 RNA5SP385-201ENST00000515947 110 ntBASIC2.97□□□□□ -1.93
HOXA9P31269 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC2.97□□□□□ -1.93
HOXA9P31269 FAM60DP-201ENST00000524174 632 ntBASIC2.97□□□□□ -1.93
HOXA9P31269 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC2.97□□□□□ -1.93
HOXA9P31269 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC2.97□□□□□ -1.93
HOXA9P31269 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC2.97□□□□□ -1.93
HOXA9P31269 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.97□□□□□ -1.93
HOXA9P31269 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC2.97□□□□□ -1.93
HOXA9P31269 MIR3945-201ENST00000581853 98 ntBASIC2.97□□□□□ -1.93
HOXA9P31269 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC2.97□□□□□ -1.93
HOXA9P31269 AC008687.2-201ENST00000597865 520 ntBASIC2.97□□□□□ -1.93
HOXA9P31269 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
HOXA9P31269 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.97□□□□□ -1.93
HOXA9P31269 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC2.97□□□□□ -1.93
HOXA9P31269 AC091046.2-201ENST00000620775 665 ntBASIC2.97□□□□□ -1.93
HOXA9P31269 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
HOXA9P31269 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC2.97□□□□□ -1.93
HOXA9P31269 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.97□□□□□ -1.93
HOXA9P31269 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.97□□□□□ -1.93
HOXA9P31269 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
HOXA9P31269 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
HOXA9P31269 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
HOXA9P31269 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
HOXA9P31269 AL672167.1-206ENST00000356293 943 ntBASIC2.96□□□□□ -1.94
HOXA9P31269 RPL31P1-201ENST00000398116 372 ntBASIC2.96□□□□□ -1.94
HOXA9P31269 MTND4LP20-201ENST00000402379 270 ntBASIC2.96□□□□□ -1.94
HOXA9P31269 AL138827.1-201ENST00000402666 306 ntBASIC2.96□□□□□ -1.94
HOXA9P31269 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
HOXA9P31269 RN7SKP58-201ENST00000411010 305 ntBASIC2.96□□□□□ -1.94
HOXA9P31269 AC245054.2-201ENST00000415639 319 ntBASIC2.96□□□□□ -1.94
HOXA9P31269 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
HOXA9P31269 OFD1P11Y-201ENST00000418213 1177 ntBASIC2.96□□□□□ -1.94
HOXA9P31269 HSFY7P-201ENST00000432672 318 ntBASIC2.96□□□□□ -1.94
HOXA9P31269 HSFY8P-201ENST00000437934 318 ntBASIC2.96□□□□□ -1.94
HOXA9P31269 HSFY5P-201ENST00000453726 309 ntBASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 125.2 ms