Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 Y_RNA.25-201ENST00000362528 102 ntBASIC4.02□□□□□ -1.77
HOXC6P09630 RNU5F-7P-201ENST00000363696 115 ntBASIC4.02□□□□□ -1.77
HOXC6P09630 RNU6-348P-201ENST00000384386 107 ntBASIC4.02□□□□□ -1.77
HOXC6P09630 SNORA51.12-201ENST00000384448 134 ntBASIC4.02□□□□□ -1.77
HOXC6P09630 SNORA48.5-201ENST00000391143 135 ntBASIC4.02□□□□□ -1.77
HOXC6P09630 TMSB4XP8-201ENST00000402089 135 ntBASIC4.02□□□□□ -1.77
HOXC6P09630 TMSB4XP6-201ENST00000415187 135 ntBASIC4.02□□□□□ -1.77
HOXC6P09630 MTCYBP38-201ENST00000417160 1123 ntBASIC4.02□□□□□ -1.77
HOXC6P09630 HMGB3P20-201ENST00000417997 600 ntBASIC4.02□□□□□ -1.77
HOXC6P09630 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.02□□□□□ -1.77
HOXC6P09630 FNDC3CP-201ENST00000420795 1155 ntBASIC4.02□□□□□ -1.77
HOXC6P09630 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC4.02□□□□□ -1.77
HOXC6P09630 TMSB4XP1-201ENST00000424567 135 ntBASIC4.02□□□□□ -1.77
HOXC6P09630 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC4.02□□□□□ -1.77
HOXC6P09630 NPM1P24-201ENST00000428039 894 ntBASIC4.02□□□□□ -1.77
HOXC6P09630 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC4.02□□□□□ -1.77
HOXC6P09630 EEF1E1P1-201ENST00000446998 430 ntBASIC4.02□□□□□ -1.77
HOXC6P09630 MTND4P18-201ENST00000447010 465 ntBASIC4.02□□□□□ -1.77
HOXC6P09630 MTND2P33-201ENST00000506452 1031 ntBASIC4.02□□□□□ -1.77
HOXC6P09630 FABP5P5-201ENST00000515537 406 ntBASIC4.02□□□□□ -1.77
HOXC6P09630 OR5G4P-201ENST00000525251 760 ntBASIC4.02□□□□□ -1.77
HOXC6P09630 AC087883.1-201ENST00000551882 391 ntBASIC4.02□□□□□ -1.77
HOXC6P09630 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC4.02□□□□□ -1.77
HOXC6P09630 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC4.02□□□□□ -1.77
HOXC6P09630 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC4.02□□□□□ -1.77
HOXC6P09630 AC069304.2-201ENST00000605154 435 ntBASIC4.02□□□□□ -1.77
HOXC6P09630 AC025588.4-201ENST00000615802 908 ntBASIC4.02□□□□□ -1.77
HOXC6P09630 AC091905.1-201ENST00000624400 311 ntBASIC4.02□□□□□ -1.77
HOXC6P09630 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC4.02□□□□□ -1.77
HOXC6P09630 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.02□□□□□ -1.77
HOXC6P09630 AL732372.2-225ENST00000642124 456 ntBASIC4.02□□□□□ -1.77
HOXC6P09630 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
HOXC6P09630 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
HOXC6P09630 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
HOXC6P09630 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
HOXC6P09630 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC4.02□□□□□ -1.77
HOXC6P09630 ZNF37BP-203ENST00000452306 1352 ntBASIC4.02□□□□□ -1.77
HOXC6P09630 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
HOXC6P09630 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
HOXC6P09630 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC4.01□□□□□ -1.77
HOXC6P09630 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
HOXC6P09630 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
HOXC6P09630 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
HOXC6P09630 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.01□□□□□ -1.77
HOXC6P09630 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.01□□□□□ -1.77
HOXC6P09630 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
HOXC6P09630 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
HOXC6P09630 Y_RNA.6-201ENST00000362350 114 ntBASIC4.01□□□□□ -1.77
HOXC6P09630 RNU6-501P-201ENST00000364072 100 ntBASIC4.01□□□□□ -1.77
HOXC6P09630 RNU6-115P-201ENST00000364310 107 ntBASIC4.01□□□□□ -1.77
HOXC6P09630 CUBN-201ENST00000377823 705 ntTSL 3 BASIC4.01□□□□□ -1.77
HOXC6P09630 RPL23AP48-201ENST00000406913 488 ntBASIC4.01□□□□□ -1.77
HOXC6P09630 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC4.01□□□□□ -1.77
HOXC6P09630 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC4.01□□□□□ -1.77
HOXC6P09630 RWDD4P2-201ENST00000426392 563 ntBASIC4.01□□□□□ -1.77
HOXC6P09630 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC4.01□□□□□ -1.77
HOXC6P09630 OR2B8P-201ENST00000432841 938 ntBASIC4.01□□□□□ -1.77
HOXC6P09630 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC4.01□□□□□ -1.77
HOXC6P09630 MTND2P20-201ENST00000440805 661 ntBASIC4.01□□□□□ -1.77
HOXC6P09630 RPL23AP15-201ENST00000450202 459 ntBASIC4.01□□□□□ -1.77
HOXC6P09630 FGF7P3-201ENST00000454645 303 ntBASIC4.01□□□□□ -1.77
HOXC6P09630 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC4.01□□□□□ -1.77
HOXC6P09630 BTF3L4P4-201ENST00000506381 449 ntBASIC4.01□□□□□ -1.77
HOXC6P09630 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC4.01□□□□□ -1.77
HOXC6P09630 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC4.01□□□□□ -1.77
HOXC6P09630 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
HOXC6P09630 PHBP14-201ENST00000512887 367 ntBASIC4.01□□□□□ -1.77
HOXC6P09630 AC010342.1-201ENST00000514047 877 ntBASIC4.01□□□□□ -1.77
HOXC6P09630 IGKV2-26-201ENST00000518305 343 ntBASIC4.01□□□□□ -1.77
HOXC6P09630 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC4.01□□□□□ -1.77
HOXC6P09630 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC4.01□□□□□ -1.77
HOXC6P09630 AC087276.1-201ENST00000529659 480 ntBASIC4.01□□□□□ -1.77
HOXC6P09630 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC4.01□□□□□ -1.77
HOXC6P09630 AC090502.2-201ENST00000549267 280 ntBASIC4.01□□□□□ -1.77
HOXC6P09630 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC4.01□□□□□ -1.77
HOXC6P09630 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC4.01□□□□□ -1.77
HOXC6P09630 MIR4298-201ENST00000584380 73 ntBASIC4.01□□□□□ -1.77
HOXC6P09630 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
HOXC6P09630 AC027807.2-201ENST00000616099 408 ntBASIC4.01□□□□□ -1.77
HOXC6P09630 AC138932.5-201ENST00000617759 563 ntBASIC4.01□□□□□ -1.77
HOXC6P09630 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
HOXC6P09630 AC103858.2-201ENST00000621471 543 ntBASIC4.01□□□□□ -1.77
HOXC6P09630 AP006248.2-201ENST00000623309 592 ntBASIC4.01□□□□□ -1.77
HOXC6P09630 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
HOXC6P09630 AC093908.1-201ENST00000623125 8092 ntBASIC4.01□□□□□ -1.77
HOXC6P09630 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.01□□□□□ -1.77
HOXC6P09630 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4□□□□□ -1.77
HOXC6P09630 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4□□□□□ -1.77
HOXC6P09630 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC4□□□□□ -1.77
HOXC6P09630 TEX21P-201ENST00000447107 1476 ntBASIC4□□□□□ -1.77
HOXC6P09630 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
HOXC6P09630 FGF7P2-201ENST00000332473 296 ntBASIC4□□□□□ -1.77
HOXC6P09630 RNA5SP502-201ENST00000362694 119 ntBASIC4□□□□□ -1.77
HOXC6P09630 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC4□□□□□ -1.77
HOXC6P09630 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC4□□□□□ -1.77
HOXC6P09630 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC4□□□□□ -1.77
HOXC6P09630 RNU6-657P-201ENST00000383904 107 ntBASIC4□□□□□ -1.77
HOXC6P09630 SLC9B1P2-201ENST00000398120 1184 ntBASIC4□□□□□ -1.77
HOXC6P09630 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC4□□□□□ -1.77
HOXC6P09630 Y_RNA.604-201ENST00000410574 102 ntBASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms