Protein–RNA interactions for Protein: P08670

VIM, Vimentin, humanhuman

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIMP08670 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
VIMP08670 AC103988.1-201ENST00000566382 2177 ntBASIC3.44□□□□□ -1.86
VIMP08670 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
VIMP08670 RNU4-28P-201ENST00000364739 141 ntBASIC3.44□□□□□ -1.86
VIMP08670 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
VIMP08670 AL049693.1-201ENST00000402760 611 ntBASIC3.44□□□□□ -1.86
VIMP08670 RNU2-43P-201ENST00000410306 190 ntBASIC3.44□□□□□ -1.86
VIMP08670 RN7SKP123-201ENST00000410732 291 ntBASIC3.44□□□□□ -1.86
VIMP08670 RN7SKP53-201ENST00000411337 315 ntBASIC3.44□□□□□ -1.86
VIMP08670 AC007899.1-201ENST00000412776 775 ntBASIC3.44□□□□□ -1.86
VIMP08670 RPS15AP38-201ENST00000413110 372 ntBASIC3.44□□□□□ -1.86
VIMP08670 RPS24P7-201ENST00000416921 246 ntBASIC3.44□□□□□ -1.86
VIMP08670 AL356095.1-201ENST00000417217 199 ntBASIC3.44□□□□□ -1.86
VIMP08670 MTCO2P21-201ENST00000419780 677 ntBASIC3.44□□□□□ -1.86
VIMP08670 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.44□□□□□ -1.86
VIMP08670 TXNL1P1-201ENST00000429528 554 ntBASIC3.44□□□□□ -1.86
VIMP08670 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.44□□□□□ -1.86
VIMP08670 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC3.44□□□□□ -1.86
VIMP08670 SNRPEP7-201ENST00000438350 220 ntBASIC3.44□□□□□ -1.86
VIMP08670 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC3.44□□□□□ -1.86
VIMP08670 RSL24D1P3-201ENST00000449255 495 ntBASIC3.44□□□□□ -1.86
VIMP08670 AC097262.1-201ENST00000452559 548 ntBASIC3.44□□□□□ -1.86
VIMP08670 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.44□□□□□ -1.86
VIMP08670 AC017015.1-201ENST00000477387 286 ntBASIC3.44□□□□□ -1.86
VIMP08670 HMGB1P36-201ENST00000487709 576 ntBASIC3.44□□□□□ -1.86
VIMP08670 RN7SL323P-201ENST00000494712 295 ntBASIC3.44□□□□□ -1.86
VIMP08670 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.44□□□□□ -1.86
VIMP08670 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.44□□□□□ -1.86
VIMP08670 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.44□□□□□ -1.86
VIMP08670 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
VIMP08670 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
VIMP08670 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.44□□□□□ -1.86
VIMP08670 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC3.44□□□□□ -1.86
VIMP08670 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.44□□□□□ -1.86
VIMP08670 MIR4286-201ENST00000580651 93 ntBASIC3.44□□□□□ -1.86
VIMP08670 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC3.44□□□□□ -1.86
VIMP08670 AC007448.1-201ENST00000582714 234 ntBASIC3.44□□□□□ -1.86
VIMP08670 AL353997.4-201ENST00000586196 166 ntBASIC3.44□□□□□ -1.86
VIMP08670 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC3.44□□□□□ -1.86
VIMP08670 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.44□□□□□ -1.86
VIMP08670 AC234772.3-201ENST00000602277 528 ntBASIC3.44□□□□□ -1.86
VIMP08670 AC025588.2-201ENST00000604851 466 ntBASIC3.44□□□□□ -1.86
VIMP08670 AC106900.2-201ENST00000604994 317 ntBASIC3.44□□□□□ -1.86
VIMP08670 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.44□□□□□ -1.86
VIMP08670 VIS1.1-201ENST00000610517 203 ntBASIC3.44□□□□□ -1.86
VIMP08670 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.44□□□□□ -1.86
VIMP08670 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
VIMP08670 AC011330.2-201ENST00000621680 635 ntBASIC3.44□□□□□ -1.86
VIMP08670 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.44□□□□□ -1.86
VIMP08670 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
VIMP08670 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.44□□□□□ -1.86
VIMP08670 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
VIMP08670 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
VIMP08670 AL161781.1-201ENST00000354277 403 ntBASIC3.43□□□□□ -1.86
VIMP08670 RN7SKP280-201ENST00000364196 304 ntBASIC3.43□□□□□ -1.86
VIMP08670 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
VIMP08670 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
VIMP08670 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
VIMP08670 AL591034.1-201ENST00000407447 340 ntBASIC3.43□□□□□ -1.86
VIMP08670 RNU4-65P-201ENST00000410473 140 ntBASIC3.43□□□□□ -1.86
VIMP08670 PIGPP2-201ENST00000411569 458 ntBASIC3.43□□□□□ -1.86
VIMP08670 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.43□□□□□ -1.86
VIMP08670 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.43□□□□□ -1.86
VIMP08670 BX119904.4-201ENST00000424402 301 ntBASIC3.43□□□□□ -1.86
VIMP08670 UBE2D3P2-201ENST00000424409 445 ntBASIC3.43□□□□□ -1.86
VIMP08670 RPL21P40-201ENST00000428586 483 ntBASIC3.43□□□□□ -1.86
VIMP08670 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.43□□□□□ -1.86
VIMP08670 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC3.43□□□□□ -1.86
VIMP08670 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC3.43□□□□□ -1.86
VIMP08670 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC3.43□□□□□ -1.86
VIMP08670 AC008264.1-201ENST00000447612 367 ntBASIC3.43□□□□□ -1.86
VIMP08670 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC3.43□□□□□ -1.86
VIMP08670 ANKRD26P4-201ENST00000455755 950 ntBASIC3.43□□□□□ -1.86
VIMP08670 RPL30P9-201ENST00000465586 330 ntBASIC3.43□□□□□ -1.86
VIMP08670 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC3.43□□□□□ -1.86
VIMP08670 RPS23P3-201ENST00000470993 430 ntBASIC3.43□□□□□ -1.86
VIMP08670 HMGN2P13-201ENST00000476476 274 ntBASIC3.43□□□□□ -1.86
VIMP08670 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC3.43□□□□□ -1.86
VIMP08670 AC024589.1-201ENST00000512207 263 ntBASIC3.43□□□□□ -1.86
VIMP08670 MTCYBP43-201ENST00000513621 740 ntBASIC3.43□□□□□ -1.86
VIMP08670 RN7SKP122-201ENST00000515923 296 ntBASIC3.43□□□□□ -1.86
VIMP08670 RN7SKP21-201ENST00000516503 220 ntBASIC3.43□□□□□ -1.86
VIMP08670 RN7SKP282-201ENST00000516824 299 ntBASIC3.43□□□□□ -1.86
VIMP08670 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.43□□□□□ -1.86
VIMP08670 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.43□□□□□ -1.86
VIMP08670 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC3.43□□□□□ -1.86
VIMP08670 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC3.43□□□□□ -1.86
VIMP08670 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.43□□□□□ -1.86
VIMP08670 CASC16-202ENST00000563844 610 ntTSL 3 BASIC3.43□□□□□ -1.86
VIMP08670 AC034268.2-201ENST00000571784 482 ntBASIC3.43□□□□□ -1.86
VIMP08670 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.43□□□□□ -1.86
VIMP08670 MIR6867-201ENST00000610636 67 ntBASIC3.43□□□□□ -1.86
VIMP08670 TUSC7.1-201ENST00000610969 165 ntBASIC3.43□□□□□ -1.86
VIMP08670 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
VIMP08670 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
VIMP08670 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.43□□□□□ -1.86
VIMP08670 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC3.43□□□□□ -1.86
VIMP08670 AC017071.1-201ENST00000564407 2204 ntBASIC3.43□□□□□ -1.86
VIMP08670 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.43□□□□□ -1.86
VIMP08670 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 137.6 ms