Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 AC114878.1-201ENST00000441166 358 ntBASIC2.22□□□□□ -2.05
COL4A2P08572 RPS7P5-201ENST00000441482 581 ntBASIC2.22□□□□□ -2.05
COL4A2P08572 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC2.22□□□□□ -2.05
COL4A2P08572 AL645939.1-201ENST00000453429 797 ntBASIC2.22□□□□□ -2.05
COL4A2P08572 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC2.22□□□□□ -2.05
COL4A2P08572 CABYRP1-201ENST00000465493 1045 ntBASIC2.22□□□□□ -2.05
COL4A2P08572 FAM172BP-201ENST00000487497 1089 ntBASIC2.22□□□□□ -2.05
COL4A2P08572 AC116337.1-201ENST00000509680 687 ntBASIC2.22□□□□□ -2.05
COL4A2P08572 HAUS1P3-201ENST00000523909 662 ntBASIC2.22□□□□□ -2.05
COL4A2P08572 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC2.22□□□□□ -2.05
COL4A2P08572 CBX3P2-202ENST00000583365 535 ntBASIC2.22□□□□□ -2.05
COL4A2P08572 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.22□□□□□ -2.05
COL4A2P08572 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC2.22□□□□□ -2.05
COL4A2P08572 KATNBL1P1-201ENST00000605192 748 ntBASIC2.22□□□□□ -2.05
COL4A2P08572 AC100814.1-201ENST00000606963 623 ntBASIC2.22□□□□□ -2.05
COL4A2P08572 AL355802.4-201ENST00000607635 548 ntBASIC2.22□□□□□ -2.05
COL4A2P08572 AC104237.2-201ENST00000612456 443 ntBASIC2.22□□□□□ -2.05
COL4A2P08572 AC025016.1-201ENST00000616746 682 ntBASIC2.22□□□□□ -2.05
COL4A2P08572 MTND5P7-201ENST00000413558 1798 ntBASIC2.21□□□□□ -2.06
COL4A2P08572 AC006378.2-201ENST00000623178 2476 ntBASIC2.21□□□□□ -2.06
COL4A2P08572 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC2.21□□□□□ -2.06
COL4A2P08572 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC2.21□□□□□ -2.06
COL4A2P08572 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
COL4A2P08572 RNU6-98P-201ENST00000384173 107 ntBASIC2.21□□□□□ -2.06
COL4A2P08572 TRIAP1P1-201ENST00000427062 225 ntBASIC2.21□□□□□ -2.06
COL4A2P08572 ELOCP6-201ENST00000429066 328 ntBASIC2.21□□□□□ -2.06
COL4A2P08572 AC098826.1-201ENST00000433943 471 ntBASIC2.21□□□□□ -2.06
COL4A2P08572 ZFAND6P1-201ENST00000434138 605 ntBASIC2.21□□□□□ -2.06
COL4A2P08572 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC2.21□□□□□ -2.06
COL4A2P08572 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC2.21□□□□□ -2.06
COL4A2P08572 RPL7P52-201ENST00000449200 742 ntBASIC2.21□□□□□ -2.06
COL4A2P08572 HMGB3P30-201ENST00000457863 606 ntBASIC2.21□□□□□ -2.06
COL4A2P08572 ELOCP12-201ENST00000458706 328 ntBASIC2.21□□□□□ -2.06
COL4A2P08572 RPL21P103-201ENST00000479921 488 ntBASIC2.21□□□□□ -2.06
COL4A2P08572 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC2.21□□□□□ -2.06
COL4A2P08572 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.21□□□□□ -2.06
COL4A2P08572 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
COL4A2P08572 RN7SKP96-201ENST00000516948 297 ntBASIC2.21□□□□□ -2.06
COL4A2P08572 AC004923.2-201ENST00000529649 369 ntBASIC2.21□□□□□ -2.06
COL4A2P08572 PTP4A1P6-201ENST00000531034 478 ntBASIC2.21□□□□□ -2.06
COL4A2P08572 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC2.21□□□□□ -2.06
COL4A2P08572 OR6C73P-201ENST00000546432 358 ntBASIC2.21□□□□□ -2.06
COL4A2P08572 NOP56P3-201ENST00000549457 385 ntBASIC2.21□□□□□ -2.06
COL4A2P08572 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC2.21□□□□□ -2.06
COL4A2P08572 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.21□□□□□ -2.06
COL4A2P08572 AC233266.2-201ENST00000567067 528 ntBASIC2.21□□□□□ -2.06
COL4A2P08572 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.21□□□□□ -2.06
COL4A2P08572 MIR7111-201ENST00000619751 72 ntBASIC2.21□□□□□ -2.06
COL4A2P08572 CYP3A51P-201ENST00000633513 256 ntBASIC2.21□□□□□ -2.06
COL4A2P08572 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.21□□□□□ -2.06
COL4A2P08572 AC025125.1-201ENST00000624743 1922 ntBASIC2.21□□□□□ -2.06
COL4A2P08572 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
COL4A2P08572 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
COL4A2P08572 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
COL4A2P08572 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
COL4A2P08572 RNU1-138P-201ENST00000384093 164 ntBASIC2.2□□□□□ -2.06
COL4A2P08572 MIR153-1-201ENST00000384914 90 ntBASIC2.2□□□□□ -2.06
COL4A2P08572 SNORA26.7-201ENST00000391288 122 ntBASIC2.2□□□□□ -2.06
COL4A2P08572 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
COL4A2P08572 AL354719.1-201ENST00000406535 843 ntBASIC2.2□□□□□ -2.06
COL4A2P08572 MTND3P20-201ENST00000407663 186 ntBASIC2.2□□□□□ -2.06
COL4A2P08572 AL096701.2-201ENST00000416920 238 ntBASIC2.2□□□□□ -2.06
COL4A2P08572 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
COL4A2P08572 AC023347.2-201ENST00000433994 462 ntBASIC2.2□□□□□ -2.06
COL4A2P08572 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC2.2□□□□□ -2.06
COL4A2P08572 CKS1BP2-201ENST00000497342 240 ntBASIC2.2□□□□□ -2.06
COL4A2P08572 RNA5SP402-201ENST00000517148 110 ntBASIC2.2□□□□□ -2.06
COL4A2P08572 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC2.2□□□□□ -2.06
COL4A2P08572 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC2.2□□□□□ -2.06
COL4A2P08572 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC2.2□□□□□ -2.06
COL4A2P08572 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC2.2□□□□□ -2.06
COL4A2P08572 AC024595.1-201ENST00000623088 387 ntBASIC2.2□□□□□ -2.06
COL4A2P08572 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
COL4A2P08572 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.2□□□□□ -2.06
COL4A2P08572 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC2.2□□□□□ -2.06
COL4A2P08572 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC2.2□□□□□ -2.06
COL4A2P08572 ZNF33CP-201ENST00000432492 2030 ntBASIC2.2□□□□□ -2.06
COL4A2P08572 AL049737.1-201ENST00000413920 1403 ntBASIC2.2□□□□□ -2.06
COL4A2P08572 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
COL4A2P08572 XKRYP4-201ENST00000414395 483 ntBASIC2.2□□□□□ -2.06
COL4A2P08572 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC2.2□□□□□ -2.06
COL4A2P08572 AC023128.2-201ENST00000420880 1223 ntBASIC2.2□□□□□ -2.06
COL4A2P08572 AL121882.1-201ENST00000422893 417 ntBASIC2.2□□□□□ -2.06
COL4A2P08572 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC2.2□□□□□ -2.06
COL4A2P08572 MTND4LP14-201ENST00000429447 288 ntBASIC2.2□□□□□ -2.06
COL4A2P08572 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
COL4A2P08572 RPS27P5-201ENST00000444247 244 ntBASIC2.2□□□□□ -2.06
COL4A2P08572 XKRYP5-201ENST00000449659 483 ntBASIC2.2□□□□□ -2.06
COL4A2P08572 AC025181.1-201ENST00000477507 416 ntBASIC2.2□□□□□ -2.06
COL4A2P08572 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.2□□□□□ -2.06
COL4A2P08572 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC2.2□□□□□ -2.06
COL4A2P08572 AC025881.1-201ENST00000518851 512 ntBASIC2.2□□□□□ -2.06
COL4A2P08572 OR5D17P-201ENST00000531492 978 ntBASIC2.2□□□□□ -2.06
COL4A2P08572 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC2.2□□□□□ -2.06
COL4A2P08572 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC2.2□□□□□ -2.06
COL4A2P08572 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC2.2□□□□□ -2.06
COL4A2P08572 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC2.2□□□□□ -2.06
COL4A2P08572 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC2.2□□□□□ -2.06
COL4A2P08572 AC079610.2-201ENST00000604818 690 ntBASIC2.2□□□□□ -2.06
COL4A2P08572 AP004247.3-201ENST00000608682 624 ntBASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms