Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.53□□□□□ -1.84
VTNP04004 YWHAZP7-201ENST00000436906 631 ntBASIC3.53□□□□□ -1.84
VTNP04004 MTND2P22-201ENST00000444325 1033 ntBASIC3.53□□□□□ -1.84
VTNP04004 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC3.53□□□□□ -1.84
VTNP04004 SLC31A1P1-201ENST00000451221 567 ntBASIC3.53□□□□□ -1.84
VTNP04004 RPL23AP35-201ENST00000451906 501 ntBASIC3.53□□□□□ -1.84
VTNP04004 AC104073.1-201ENST00000451988 151 ntBASIC3.53□□□□□ -1.84
VTNP04004 AP000873.1-201ENST00000463987 400 ntBASIC3.53□□□□□ -1.84
VTNP04004 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.53□□□□□ -1.84
VTNP04004 RPL5P23-201ENST00000496040 868 ntBASIC3.53□□□□□ -1.84
VTNP04004 AC104685.1-201ENST00000502445 371 ntBASIC3.53□□□□□ -1.84
VTNP04004 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
VTNP04004 XKRY-201ENST00000510392 1100 ntBASIC3.53□□□□□ -1.84
VTNP04004 RNU6-583P-201ENST00000516012 92 ntBASIC3.53□□□□□ -1.84
VTNP04004 IGKV2D-36-201ENST00000518643 226 ntBASIC3.53□□□□□ -1.84
VTNP04004 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC3.53□□□□□ -1.84
VTNP04004 AC135001.1-201ENST00000544546 283 ntBASIC3.53□□□□□ -1.84
VTNP04004 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC3.53□□□□□ -1.84
VTNP04004 UBL5P2-201ENST00000583788 219 ntBASIC3.53□□□□□ -1.84
VTNP04004 AL109653.1-201ENST00000603091 248 ntBASIC3.53□□□□□ -1.84
VTNP04004 AC011816.2-201ENST00000607089 556 ntBASIC3.53□□□□□ -1.84
VTNP04004 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC3.53□□□□□ -1.84
VTNP04004 AL360219.1-201ENST00000610230 366 ntBASIC3.53□□□□□ -1.84
VTNP04004 VIS1.1-201ENST00000610517 203 ntBASIC3.53□□□□□ -1.84
VTNP04004 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.53□□□□□ -1.84
VTNP04004 AL136981.2-201ENST00000617319 734 ntBASIC3.53□□□□□ -1.84
VTNP04004 U73479.1-201ENST00000618062 168 ntBASIC3.53□□□□□ -1.84
VTNP04004 C2orf27A-204ENST00000623058 969 ntBASIC3.53□□□□□ -1.84
VTNP04004 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
VTNP04004 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.53□□□□□ -1.84
VTNP04004 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
VTNP04004 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.53□□□□□ -1.84
VTNP04004 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
VTNP04004 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
VTNP04004 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.53□□□□□ -1.84
VTNP04004 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.52□□□□□ -1.85
VTNP04004 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
VTNP04004 MIR30E-201ENST00000362104 92 ntBASIC3.52□□□□□ -1.85
VTNP04004 RNU6-374P-201ENST00000364146 108 ntBASIC3.52□□□□□ -1.85
VTNP04004 RNU6-621P-201ENST00000364752 109 ntBASIC3.52□□□□□ -1.85
VTNP04004 CUBN-201ENST00000377823 705 ntTSL 3 BASIC3.52□□□□□ -1.85
VTNP04004 AC016769.3-201ENST00000396562 315 ntBASIC3.52□□□□□ -1.85
VTNP04004 AL603766.1-201ENST00000407763 664 ntBASIC3.52□□□□□ -1.85
VTNP04004 MIR1183-201ENST00000408856 89 ntBASIC3.52□□□□□ -1.85
VTNP04004 AL133384.1-201ENST00000412744 351 ntBASIC3.52□□□□□ -1.85
VTNP04004 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.52□□□□□ -1.85
VTNP04004 AL022400.1-201ENST00000423946 935 ntBASIC3.52□□□□□ -1.85
VTNP04004 MTND4P20-201ENST00000424125 869 ntBASIC3.52□□□□□ -1.85
VTNP04004 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
VTNP04004 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.52□□□□□ -1.85
VTNP04004 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.52□□□□□ -1.85
VTNP04004 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC3.52□□□□□ -1.85
VTNP04004 HMGN2P21-201ENST00000447764 270 ntBASIC3.52□□□□□ -1.85
VTNP04004 RPL18AP17-201ENST00000455326 198 ntBASIC3.52□□□□□ -1.85
VTNP04004 S100A11P2-201ENST00000467589 312 ntBASIC3.52□□□□□ -1.85
VTNP04004 RPL27AP5-201ENST00000469428 449 ntBASIC3.52□□□□□ -1.85
VTNP04004 AC147055.4-201ENST00000504399 745 ntBASIC3.52□□□□□ -1.85
VTNP04004 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.52□□□□□ -1.85
VTNP04004 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.52□□□□□ -1.85
VTNP04004 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC3.52□□□□□ -1.85
VTNP04004 OR4A45P-201ENST00000529954 901 ntBASIC3.52□□□□□ -1.85
VTNP04004 AC125611.1-201ENST00000549563 229 ntBASIC3.52□□□□□ -1.85
VTNP04004 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.52□□□□□ -1.85
VTNP04004 AL121603.1-201ENST00000553815 142 ntBASIC3.52□□□□□ -1.85
VTNP04004 AC012435.1-202ENST00000568772 240 ntBASIC3.52□□□□□ -1.85
VTNP04004 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC3.52□□□□□ -1.85
VTNP04004 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.52□□□□□ -1.85
VTNP04004 AC025588.3-201ENST00000604182 274 ntBASIC3.52□□□□□ -1.85
VTNP04004 AL034351.1-201ENST00000605288 668 ntBASIC3.52□□□□□ -1.85
VTNP04004 AC243773.3-201ENST00000613270 256 ntBASIC3.52□□□□□ -1.85
VTNP04004 ATP5A1P2-202ENST00000616464 443 ntBASIC3.52□□□□□ -1.85
VTNP04004 AL390862.1-201ENST00000635467 1469 ntBASIC3.52□□□□□ -1.85
VTNP04004 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
VTNP04004 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.52□□□□□ -1.85
VTNP04004 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.52□□□□□ -1.85
VTNP04004 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
VTNP04004 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.51□□□□□ -1.85
VTNP04004 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
VTNP04004 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
VTNP04004 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
VTNP04004 OR5H2-201ENST00000355273 945 ntBASIC3.51□□□□□ -1.85
VTNP04004 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
VTNP04004 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
VTNP04004 MIR506-201ENST00000384998 124 ntBASIC3.51□□□□□ -1.85
VTNP04004 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
VTNP04004 RPL23AP29-201ENST00000397284 453 ntBASIC3.51□□□□□ -1.85
VTNP04004 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
VTNP04004 EIF5P1-201ENST00000400019 1231 ntBASIC3.51□□□□□ -1.85
VTNP04004 RNU4-72P-201ENST00000410754 173 ntBASIC3.51□□□□□ -1.85
VTNP04004 RPL30P2-201ENST00000414021 291 ntBASIC3.51□□□□□ -1.85
VTNP04004 MTCYBP24-201ENST00000420387 1106 ntBASIC3.51□□□□□ -1.85
VTNP04004 USP9YP26-201ENST00000421008 661 ntBASIC3.51□□□□□ -1.85
VTNP04004 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.51□□□□□ -1.85
VTNP04004 AL035410.1-201ENST00000427409 427 ntBASIC3.51□□□□□ -1.85
VTNP04004 UBE2D3P1-201ENST00000436669 444 ntBASIC3.51□□□□□ -1.85
VTNP04004 CST9LP2-201ENST00000437612 320 ntBASIC3.51□□□□□ -1.85
VTNP04004 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC3.51□□□□□ -1.85
VTNP04004 RPL39P6-201ENST00000448289 150 ntBASIC3.51□□□□□ -1.85
VTNP04004 RSL24D1P3-201ENST00000449255 495 ntBASIC3.51□□□□□ -1.85
VTNP04004 SNRPGP5-201ENST00000456003 220 ntBASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 150.7 ms