Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 CR848007.1-201ENST00000442354 1699 ntBASIC2.54□□□□□ -2
APOA1P02647 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC2.54□□□□□ -2
APOA1P02647 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC2.54□□□□□ -2
APOA1P02647 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.54□□□□□ -2
APOA1P02647 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC2.54□□□□□ -2
APOA1P02647 SNORA5A-201ENST00000384111 134 ntBASIC2.54□□□□□ -2
APOA1P02647 RNU6-878P-201ENST00000384578 110 ntBASIC2.54□□□□□ -2
APOA1P02647 MIR218-2-201ENST00000385006 110 ntBASIC2.54□□□□□ -2
APOA1P02647 TAS2R15P-201ENST00000390674 928 ntBASIC2.54□□□□□ -2
APOA1P02647 RNA5SP181-201ENST00000410246 98 ntBASIC2.54□□□□□ -2
APOA1P02647 RNU2-43P-201ENST00000410306 190 ntBASIC2.54□□□□□ -2
APOA1P02647 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC2.54□□□□□ -2
APOA1P02647 AC063979.1-201ENST00000415539 377 ntBASIC2.54□□□□□ -2
APOA1P02647 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC2.54□□□□□ -2
APOA1P02647 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.54□□□□□ -2
APOA1P02647 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC2.54□□□□□ -2
APOA1P02647 PSMA6P3-201ENST00000428242 164 ntBASIC2.54□□□□□ -2
APOA1P02647 MTCYBP3-201ENST00000445588 1137 ntBASIC2.54□□□□□ -2
APOA1P02647 RPS15AP27-201ENST00000449183 343 ntBASIC2.54□□□□□ -2
APOA1P02647 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.54□□□□□ -2
APOA1P02647 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC2.54□□□□□ -2
APOA1P02647 CEACAMP10-202ENST00000495431 496 ntBASIC2.54□□□□□ -2
APOA1P02647 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC2.54□□□□□ -2
APOA1P02647 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC2.54□□□□□ -2
APOA1P02647 AC113420.1-201ENST00000507903 571 ntBASIC2.54□□□□□ -2
APOA1P02647 AC118282.2-201ENST00000508739 374 ntBASIC2.54□□□□□ -2
APOA1P02647 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC2.54□□□□□ -2
APOA1P02647 MRPS36P2-201ENST00000512569 299 ntBASIC2.54□□□□□ -2
APOA1P02647 HMGN1P15-201ENST00000513870 295 ntBASIC2.54□□□□□ -2
APOA1P02647 SNORA76.2-201ENST00000517095 137 ntBASIC2.54□□□□□ -2
APOA1P02647 CDH12P4-201ENST00000517835 295 ntBASIC2.54□□□□□ -2
APOA1P02647 CDH12P3-201ENST00000517935 295 ntBASIC2.54□□□□□ -2
APOA1P02647 CDH12P1-201ENST00000518435 295 ntBASIC2.54□□□□□ -2
APOA1P02647 OR5B10P-201ENST00000532869 642 ntBASIC2.54□□□□□ -2
APOA1P02647 ARL6IP1P1-201ENST00000545836 610 ntBASIC2.54□□□□□ -2
APOA1P02647 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
APOA1P02647 AL355836.1-201ENST00000555951 870 ntBASIC2.54□□□□□ -2
APOA1P02647 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
APOA1P02647 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.54□□□□□ -2
APOA1P02647 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC2.54□□□□□ -2
APOA1P02647 NRBF2P5-201ENST00000603087 788 ntBASIC2.54□□□□□ -2
APOA1P02647 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
APOA1P02647 AL512506.2-201ENST00000624472 458 ntBASIC2.54□□□□□ -2
APOA1P02647 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.54□□□□□ -2
APOA1P02647 SDAD1P2-201ENST00000441308 2028 ntBASIC2.54□□□□□ -2
APOA1P02647 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.54□□□□□ -2
APOA1P02647 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
APOA1P02647 ZNF285B-201ENST00000561698 1767 ntBASIC2.54□□□□□ -2
APOA1P02647 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.53□□□□□ -2
APOA1P02647 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.53□□□□□ -2
APOA1P02647 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.53□□□□□ -2
APOA1P02647 AC126755.2-208ENST00000327792 462 ntBASIC2.53□□□□□ -2
APOA1P02647 AC138969.1-213ENST00000331436 462 ntBASIC2.53□□□□□ -2
APOA1P02647 SYF2P2-201ENST00000417620 583 ntBASIC2.53□□□□□ -2
APOA1P02647 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC2.53□□□□□ -2
APOA1P02647 KRR1P1-201ENST00000419430 803 ntBASIC2.53□□□□□ -2
APOA1P02647 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC2.53□□□□□ -2
APOA1P02647 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.53□□□□□ -2
APOA1P02647 SUMO1P4-201ENST00000429430 302 ntBASIC2.53□□□□□ -2
APOA1P02647 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC2.53□□□□□ -2
APOA1P02647 AC241584.1-201ENST00000438469 1241 ntBASIC2.53□□□□□ -2
APOA1P02647 AL714022.1-201ENST00000439897 151 ntBASIC2.53□□□□□ -2
APOA1P02647 AL445687.1-201ENST00000439946 251 ntBASIC2.53□□□□□ -2
APOA1P02647 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.53□□□□□ -2
APOA1P02647 AC009961.3-201ENST00000449832 765 ntBASIC2.53□□□□□ -2
APOA1P02647 snoU13.22-201ENST00000459428 104 ntBASIC2.53□□□□□ -2
APOA1P02647 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC2.53□□□□□ -2
APOA1P02647 AC025181.1-201ENST00000477507 416 ntBASIC2.53□□□□□ -2
APOA1P02647 AC116337.2-201ENST00000477662 156 ntBASIC2.53□□□□□ -2
APOA1P02647 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC2.53□□□□□ -2
APOA1P02647 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC2.53□□□□□ -2
APOA1P02647 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC2.53□□□□□ -2
APOA1P02647 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC2.53□□□□□ -2
APOA1P02647 AC090136.1-201ENST00000520009 240 ntBASIC2.53□□□□□ -2
APOA1P02647 HMGB1P41-201ENST00000520234 440 ntBASIC2.53□□□□□ -2
APOA1P02647 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC2.53□□□□□ -2
APOA1P02647 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC2.53□□□□□ -2
APOA1P02647 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC2.53□□□□□ -2
APOA1P02647 RN7SL622P-201ENST00000585292 275 ntBASIC2.53□□□□□ -2
APOA1P02647 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC2.53□□□□□ -2
APOA1P02647 CKS1BP3-201ENST00000600888 237 ntBASIC2.53□□□□□ -2
APOA1P02647 AL590392.1-201ENST00000604960 446 ntBASIC2.53□□□□□ -2
APOA1P02647 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.53□□□□□ -2
APOA1P02647 AL592148.2-201ENST00000612210 372 ntBASIC2.53□□□□□ -2
APOA1P02647 CR392039.5-201ENST00000623201 510 ntBASIC2.53□□□□□ -2
APOA1P02647 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
APOA1P02647 POMP-202ENST00000460403 1428 ntTSL 3 BASIC2.52□□□□□ -2.01
APOA1P02647 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
APOA1P02647 RNU1-138P-201ENST00000384093 164 ntBASIC2.52□□□□□ -2.01
APOA1P02647 RNU6-1035P-201ENST00000384477 107 ntBASIC2.52□□□□□ -2.01
APOA1P02647 RNU6-1072P-201ENST00000384703 107 ntBASIC2.52□□□□□ -2.01
APOA1P02647 RNU6-443P-201ENST00000384780 107 ntBASIC2.52□□□□□ -2.01
APOA1P02647 U3.20-201ENST00000390909 217 ntBASIC2.52□□□□□ -2.01
APOA1P02647 ANAPC10P1-201ENST00000395991 556 ntBASIC2.52□□□□□ -2.01
APOA1P02647 AL513475.1-201ENST00000406602 315 ntBASIC2.52□□□□□ -2.01
APOA1P02647 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.52□□□□□ -2.01
APOA1P02647 BEND7P1-201ENST00000422058 457 ntBASIC2.52□□□□□ -2.01
APOA1P02647 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.52□□□□□ -2.01
APOA1P02647 ZDHHC20P2-201ENST00000424108 429 ntBASIC2.52□□□□□ -2.01
APOA1P02647 AL358075.3-201ENST00000426289 226 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms