Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 AC084757.1-201ENST00000559987 490 ntBASIC5.47□□□□□ -1.53
RAPGEF3O95398 LARP7P2-201ENST00000575306 125 ntBASIC5.47□□□□□ -1.53
RAPGEF3O95398 AP001180.3-201ENST00000582221 145 ntBASIC5.47□□□□□ -1.53
RAPGEF3O95398 MIR544B-201ENST00000582372 78 ntBASIC5.47□□□□□ -1.53
RAPGEF3O95398 MIR4307-201ENST00000582802 84 ntBASIC5.47□□□□□ -1.53
RAPGEF3O95398 AL591424.2-201ENST00000617023 128 ntBASIC5.47□□□□□ -1.53
RAPGEF3O95398 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC5.47□□□□□ -1.53
RAPGEF3O95398 CRYM-AS1-204ENST00000637983 556 ntBASIC5.47□□□□□ -1.53
RAPGEF3O95398 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC5.47□□□□□ -1.53
RAPGEF3O95398 AC130650.2-201ENST00000618736 2403 ntBASIC5.47□□□□□ -1.53
RAPGEF3O95398 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
RAPGEF3O95398 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
RAPGEF3O95398 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
RAPGEF3O95398 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
RAPGEF3O95398 OR11H5P-202ENST00000641612 1325 ntBASIC5.47□□□□□ -1.53
RAPGEF3O95398 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC5.47□□□□□ -1.53
RAPGEF3O95398 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
RAPGEF3O95398 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC5.47□□□□□ -1.53
RAPGEF3O95398 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
RAPGEF3O95398 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
RAPGEF3O95398 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
RAPGEF3O95398 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC5.46□□□□□ -1.54
RAPGEF3O95398 RNY4P24-201ENST00000362735 96 ntBASIC5.46□□□□□ -1.54
RAPGEF3O95398 Y_RNA.516-201ENST00000384541 124 ntBASIC5.46□□□□□ -1.54
RAPGEF3O95398 RNU6-952P-201ENST00000391164 108 ntBASIC5.46□□□□□ -1.54
RAPGEF3O95398 AC016769.3-201ENST00000396562 315 ntBASIC5.46□□□□□ -1.54
RAPGEF3O95398 DHFRP6-201ENST00000401776 268 ntBASIC5.46□□□□□ -1.54
RAPGEF3O95398 RPL5P18-201ENST00000406671 891 ntBASIC5.46□□□□□ -1.54
RAPGEF3O95398 RNU6ATAC25P-201ENST00000408798 117 ntBASIC5.46□□□□□ -1.54
RAPGEF3O95398 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC5.46□□□□□ -1.54
RAPGEF3O95398 RNU2-21P-201ENST00000410368 188 ntBASIC5.46□□□□□ -1.54
RAPGEF3O95398 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC5.46□□□□□ -1.54
RAPGEF3O95398 SAGE2P-201ENST00000420011 2126 ntBASIC5.46□□□□□ -1.54
RAPGEF3O95398 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC5.46□□□□□ -1.54
RAPGEF3O95398 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC5.46□□□□□ -1.54
RAPGEF3O95398 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
RAPGEF3O95398 IGKV1OR-3-201ENST00000446944 348 ntBASIC5.46□□□□□ -1.54
RAPGEF3O95398 USP9YP12-201ENST00000450481 570 ntBASIC5.46□□□□□ -1.54
RAPGEF3O95398 AL033528.1-201ENST00000453780 140 ntBASIC5.46□□□□□ -1.54
RAPGEF3O95398 snoU109.1-201ENST00000459339 135 ntBASIC5.46□□□□□ -1.54
RAPGEF3O95398 RPL9P33-201ENST00000484311 566 ntBASIC5.46□□□□□ -1.54
RAPGEF3O95398 RNF138P1-201ENST00000502765 546 ntBASIC5.46□□□□□ -1.54
RAPGEF3O95398 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC5.46□□□□□ -1.54
RAPGEF3O95398 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC5.46□□□□□ -1.54
RAPGEF3O95398 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC5.46□□□□□ -1.54
RAPGEF3O95398 IGLV3-26-201ENST00000520756 302 ntBASIC5.46□□□□□ -1.54
RAPGEF3O95398 COX6CP8-201ENST00000522620 226 ntBASIC5.46□□□□□ -1.54
RAPGEF3O95398 AP002748.2-201ENST00000528671 348 ntBASIC5.46□□□□□ -1.54
RAPGEF3O95398 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
RAPGEF3O95398 NTS-203ENST00000551529 801 ntTSL 3 BASIC5.46□□□□□ -1.54
RAPGEF3O95398 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC5.46□□□□□ -1.54
RAPGEF3O95398 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC5.46□□□□□ -1.54
RAPGEF3O95398 MIR5004-201ENST00000579078 107 ntBASIC5.46□□□□□ -1.54
RAPGEF3O95398 AC233702.9-201ENST00000581528 203 ntBASIC5.46□□□□□ -1.54
RAPGEF3O95398 RPL23AP92-201ENST00000603609 255 ntBASIC5.46□□□□□ -1.54
RAPGEF3O95398 ACTR3BP1-201ENST00000605584 1247 ntBASIC5.46□□□□□ -1.54
RAPGEF3O95398 AC006566.1-201ENST00000608943 513 ntBASIC5.46□□□□□ -1.54
RAPGEF3O95398 U6atac.1-201ENST00000616025 117 ntBASIC5.46□□□□□ -1.54
RAPGEF3O95398 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
RAPGEF3O95398 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
RAPGEF3O95398 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC5.46□□□□□ -1.54
RAPGEF3O95398 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
RAPGEF3O95398 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC5.46□□□□□ -1.54
RAPGEF3O95398 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
RAPGEF3O95398 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
RAPGEF3O95398 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
RAPGEF3O95398 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
RAPGEF3O95398 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC5.45□□□□□ -1.54
RAPGEF3O95398 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC5.45□□□□□ -1.54
RAPGEF3O95398 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
RAPGEF3O95398 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
RAPGEF3O95398 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
RAPGEF3O95398 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
RAPGEF3O95398 RNU6-777P-201ENST00000364265 104 ntBASIC5.45□□□□□ -1.54
RAPGEF3O95398 MTND4LP20-201ENST00000402379 270 ntBASIC5.45□□□□□ -1.54
RAPGEF3O95398 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC5.45□□□□□ -1.54
RAPGEF3O95398 USP9YP13-201ENST00000417797 480 ntBASIC5.45□□□□□ -1.54
RAPGEF3O95398 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC5.45□□□□□ -1.54
RAPGEF3O95398 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC5.45□□□□□ -1.54
RAPGEF3O95398 SKP1P1-201ENST00000438081 489 ntBASIC5.45□□□□□ -1.54
RAPGEF3O95398 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC5.45□□□□□ -1.54
RAPGEF3O95398 AC104073.1-201ENST00000451988 151 ntBASIC5.45□□□□□ -1.54
RAPGEF3O95398 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC5.45□□□□□ -1.54
RAPGEF3O95398 AC104563.1-201ENST00000476147 376 ntBASIC5.45□□□□□ -1.54
RAPGEF3O95398 AC138853.1-201ENST00000503549 823 ntBASIC5.45□□□□□ -1.54
RAPGEF3O95398 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC5.45□□□□□ -1.54
RAPGEF3O95398 AC110792.2-201ENST00000510278 224 ntBASIC5.45□□□□□ -1.54
RAPGEF3O95398 RNA5SP341-201ENST00000516261 117 ntBASIC5.45□□□□□ -1.54
RAPGEF3O95398 OR5G4P-201ENST00000525251 760 ntBASIC5.45□□□□□ -1.54
RAPGEF3O95398 OR5AP1P-201ENST00000529730 940 ntBASIC5.45□□□□□ -1.54
RAPGEF3O95398 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
RAPGEF3O95398 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC5.45□□□□□ -1.54
RAPGEF3O95398 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC5.45□□□□□ -1.54
RAPGEF3O95398 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC5.45□□□□□ -1.54
RAPGEF3O95398 BNIP3P8-201ENST00000597863 560 ntBASIC5.45□□□□□ -1.54
RAPGEF3O95398 AC015871.2-201ENST00000603605 948 ntBASIC5.45□□□□□ -1.54
RAPGEF3O95398 AL162274.2-201ENST00000614406 332 ntBASIC5.45□□□□□ -1.54
RAPGEF3O95398 AC131238.1-201ENST00000617135 328 ntBASIC5.45□□□□□ -1.54
RAPGEF3O95398 U4.6-201ENST00000621618 127 ntBASIC5.45□□□□□ -1.54
RAPGEF3O95398 CYP3A51P-201ENST00000633513 256 ntBASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms