Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 AC087359.1-201ENST00000508335 1740 ntBASIC4.12□□□□□ -1.75
MBD4O95243 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
MBD4O95243 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
MBD4O95243 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
MBD4O95243 RNA5SP197-201ENST00000363357 119 ntBASIC4.12□□□□□ -1.75
MBD4O95243 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
MBD4O95243 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
MBD4O95243 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC4.12□□□□□ -1.75
MBD4O95243 CCDC58P2-201ENST00000417131 366 ntBASIC4.12□□□□□ -1.75
MBD4O95243 MTCO1P39-201ENST00000426148 480 ntBASIC4.12□□□□□ -1.75
MBD4O95243 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC4.12□□□□□ -1.75
MBD4O95243 AL365396.1-201ENST00000430854 671 ntBASIC4.12□□□□□ -1.75
MBD4O95243 MTCYBP34-201ENST00000439552 670 ntBASIC4.12□□□□□ -1.75
MBD4O95243 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC4.12□□□□□ -1.75
MBD4O95243 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC4.12□□□□□ -1.75
MBD4O95243 MTND1P31-201ENST00000449206 961 ntBASIC4.12□□□□□ -1.75
MBD4O95243 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC4.12□□□□□ -1.75
MBD4O95243 RPL21P10-201ENST00000463521 490 ntBASIC4.12□□□□□ -1.75
MBD4O95243 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC4.12□□□□□ -1.75
MBD4O95243 AC093663.1-201ENST00000497190 394 ntBASIC4.12□□□□□ -1.75
MBD4O95243 HSPD1P15-201ENST00000505573 1122 ntBASIC4.12□□□□□ -1.75
MBD4O95243 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC4.12□□□□□ -1.75
MBD4O95243 HMGB3P15-201ENST00000507326 574 ntBASIC4.12□□□□□ -1.75
MBD4O95243 AC074250.1-201ENST00000511117 192 ntBASIC4.12□□□□□ -1.75
MBD4O95243 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC4.12□□□□□ -1.75
MBD4O95243 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
MBD4O95243 AC105914.1-201ENST00000511798 226 ntBASIC4.12□□□□□ -1.75
MBD4O95243 SNORA31.8-201ENST00000516327 108 ntBASIC4.12□□□□□ -1.75
MBD4O95243 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC4.12□□□□□ -1.75
MBD4O95243 UBTFL10-201ENST00000528532 562 ntBASIC4.12□□□□□ -1.75
MBD4O95243 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.12□□□□□ -1.75
MBD4O95243 SYF2P1-201ENST00000550658 413 ntBASIC4.12□□□□□ -1.75
MBD4O95243 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC4.12□□□□□ -1.75
MBD4O95243 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC4.12□□□□□ -1.75
MBD4O95243 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
MBD4O95243 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC4.12□□□□□ -1.75
MBD4O95243 AP001330.4-201ENST00000604350 154 ntBASIC4.12□□□□□ -1.75
MBD4O95243 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC4.12□□□□□ -1.75
MBD4O95243 AC021755.4-201ENST00000616620 456 ntBASIC4.12□□□□□ -1.75
MBD4O95243 AC103706.2-201ENST00000638080 240 ntBASIC4.12□□□□□ -1.75
MBD4O95243 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
MBD4O95243 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
MBD4O95243 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
MBD4O95243 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
MBD4O95243 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
MBD4O95243 AC002546.1-201ENST00000588041 2504 ntBASIC4.11□□□□□ -1.75
MBD4O95243 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
MBD4O95243 RNA5SP72-201ENST00000364442 117 ntBASIC4.11□□□□□ -1.75
MBD4O95243 RNU6-359P-201ENST00000365466 108 ntBASIC4.11□□□□□ -1.75
MBD4O95243 MIR34B-201ENST00000385076 84 ntBASIC4.11□□□□□ -1.75
MBD4O95243 RNU6-882P-201ENST00000391025 103 ntBASIC4.11□□□□□ -1.75
MBD4O95243 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC4.11□□□□□ -1.75
MBD4O95243 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC4.11□□□□□ -1.75
MBD4O95243 AC006946.1-201ENST00000429106 328 ntBASIC4.11□□□□□ -1.75
MBD4O95243 AL035407.1-201ENST00000429211 571 ntBASIC4.11□□□□□ -1.75
MBD4O95243 YWHAZP7-201ENST00000436906 631 ntBASIC4.11□□□□□ -1.75
MBD4O95243 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC4.11□□□□□ -1.75
MBD4O95243 MTCO3P16-201ENST00000454456 754 ntBASIC4.11□□□□□ -1.75
MBD4O95243 AP000563.1-201ENST00000490865 758 ntBASIC4.11□□□□□ -1.75
MBD4O95243 AC147055.4-201ENST00000504399 745 ntBASIC4.11□□□□□ -1.75
MBD4O95243 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
MBD4O95243 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC4.11□□□□□ -1.75
MBD4O95243 AC103783.1-201ENST00000520506 373 ntBASIC4.11□□□□□ -1.75
MBD4O95243 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC4.11□□□□□ -1.75
MBD4O95243 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC4.11□□□□□ -1.75
MBD4O95243 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC4.11□□□□□ -1.75
MBD4O95243 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC4.11□□□□□ -1.75
MBD4O95243 BNIP3P22-201ENST00000593399 556 ntBASIC4.11□□□□□ -1.75
MBD4O95243 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC4.11□□□□□ -1.75
MBD4O95243 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
MBD4O95243 AC011451.2-201ENST00000604303 598 ntBASIC4.11□□□□□ -1.75
MBD4O95243 AL022099.1-201ENST00000604551 712 ntBASIC4.11□□□□□ -1.75
MBD4O95243 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC4.11□□□□□ -1.75
MBD4O95243 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
MBD4O95243 AC127502.3-201ENST00000636170 1206 ntBASIC4.11□□□□□ -1.75
MBD4O95243 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.11□□□□□ -1.75
MBD4O95243 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
MBD4O95243 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC4.11□□□□□ -1.75
MBD4O95243 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC4.11□□□□□ -1.75
MBD4O95243 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
MBD4O95243 AC032011.1-201ENST00000611703 1549 ntBASIC4.11□□□□□ -1.75
MBD4O95243 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC4.1□□□□□ -1.75
MBD4O95243 TAB3P1-202ENST00000452645 1634 ntBASIC4.1□□□□□ -1.75
MBD4O95243 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
MBD4O95243 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
MBD4O95243 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
MBD4O95243 AL356274.2-201ENST00000624379 3752 ntBASIC4.1□□□□□ -1.75
MBD4O95243 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
MBD4O95243 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.1□□□□□ -1.75
MBD4O95243 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC4.1□□□□□ -1.75
MBD4O95243 RNU4-65P-201ENST00000410473 140 ntBASIC4.1□□□□□ -1.75
MBD4O95243 PIGPP2-201ENST00000411569 458 ntBASIC4.1□□□□□ -1.75
MBD4O95243 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC4.1□□□□□ -1.75
MBD4O95243 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC4.1□□□□□ -1.75
MBD4O95243 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC4.1□□□□□ -1.75
MBD4O95243 OR6K5P-201ENST00000447050 945 ntBASIC4.1□□□□□ -1.75
MBD4O95243 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC4.1□□□□□ -1.75
MBD4O95243 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.1□□□□□ -1.75
MBD4O95243 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC4.1□□□□□ -1.75
MBD4O95243 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms