Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CDKL5O76039 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.6□□□□□ -1.67
CDKL5O76039 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.6□□□□□ -1.67
CDKL5O76039 AC022893.2-201ENST00000564832 3296 ntBASIC4.59□□□□□ -1.67
CDKL5O76039 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
CDKL5O76039 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
CDKL5O76039 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CDKL5O76039 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
CDKL5O76039 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CDKL5O76039 Y_RNA.38-201ENST00000362617 102 ntBASIC4.59□□□□□ -1.67
CDKL5O76039 RNY4P34-201ENST00000364779 95 ntBASIC4.59□□□□□ -1.67
CDKL5O76039 RNU6-444P-201ENST00000383988 108 ntBASIC4.59□□□□□ -1.67
CDKL5O76039 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CDKL5O76039 AL049693.1-201ENST00000402760 611 ntBASIC4.59□□□□□ -1.67
CDKL5O76039 MIR320C1-201ENST00000408566 88 ntBASIC4.59□□□□□ -1.67
CDKL5O76039 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CDKL5O76039 RNU4-55P-201ENST00000410731 137 ntBASIC4.59□□□□□ -1.67
CDKL5O76039 RNU6-195P-201ENST00000411352 109 ntBASIC4.59□□□□□ -1.67
CDKL5O76039 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.59□□□□□ -1.67
CDKL5O76039 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.59□□□□□ -1.67
CDKL5O76039 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC4.59□□□□□ -1.67
CDKL5O76039 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC4.59□□□□□ -1.67
CDKL5O76039 USP9YP36-201ENST00000424581 829 ntBASIC4.59□□□□□ -1.67
CDKL5O76039 C4BPAP2-201ENST00000428434 478 ntBASIC4.59□□□□□ -1.67
CDKL5O76039 AC023347.2-201ENST00000433994 462 ntBASIC4.59□□□□□ -1.67
CDKL5O76039 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.59□□□□□ -1.67
CDKL5O76039 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.59□□□□□ -1.67
CDKL5O76039 SNRPEP7-201ENST00000438350 220 ntBASIC4.59□□□□□ -1.67
CDKL5O76039 RABEPKP1-201ENST00000440529 1026 ntBASIC4.59□□□□□ -1.67
CDKL5O76039 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.59□□□□□ -1.67
CDKL5O76039 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.59□□□□□ -1.67
CDKL5O76039 MTCO1P42-201ENST00000457379 726 ntBASIC4.59□□□□□ -1.67
CDKL5O76039 RNU7-136P-201ENST00000458819 69 ntBASIC4.59□□□□□ -1.67
CDKL5O76039 AP000926.1-201ENST00000479573 241 ntBASIC4.59□□□□□ -1.67
CDKL5O76039 AC069499.1-201ENST00000489433 509 ntBASIC4.59□□□□□ -1.67
CDKL5O76039 AC008628.2-201ENST00000502605 298 ntBASIC4.59□□□□□ -1.67
CDKL5O76039 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.59□□□□□ -1.67
CDKL5O76039 SAP18P1-201ENST00000512058 390 ntBASIC4.59□□□□□ -1.67
CDKL5O76039 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC4.59□□□□□ -1.67
CDKL5O76039 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.59□□□□□ -1.67
CDKL5O76039 RNA5SP179-201ENST00000517284 121 ntBASIC4.59□□□□□ -1.67
CDKL5O76039 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC4.59□□□□□ -1.67
CDKL5O76039 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC4.59□□□□□ -1.67
CDKL5O76039 AC104383.1-201ENST00000530297 370 ntBASIC4.59□□□□□ -1.67
CDKL5O76039 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC4.59□□□□□ -1.67
CDKL5O76039 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.59□□□□□ -1.67
CDKL5O76039 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.59□□□□□ -1.67
CDKL5O76039 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.59□□□□□ -1.67
CDKL5O76039 CENPUP2-201ENST00000555897 1186 ntBASIC4.59□□□□□ -1.67
CDKL5O76039 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC4.59□□□□□ -1.67
CDKL5O76039 SULT1C2P1-202ENST00000562418 459 ntBASIC4.59□□□□□ -1.67
CDKL5O76039 AC009101.1-201ENST00000568135 242 ntBASIC4.59□□□□□ -1.67
CDKL5O76039 AC106871.1-201ENST00000568324 3102 ntBASIC4.59□□□□□ -1.67
CDKL5O76039 FGF7P1-201ENST00000582820 288 ntBASIC4.59□□□□□ -1.67
CDKL5O76039 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC4.59□□□□□ -1.67
CDKL5O76039 AL590282.1-201ENST00000610379 1136 ntBASIC4.59□□□□□ -1.67
CDKL5O76039 AC104260.1-201ENST00000616660 539 ntBASIC4.59□□□□□ -1.67
CDKL5O76039 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC4.59□□□□□ -1.67
CDKL5O76039 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.59□□□□□ -1.67
CDKL5O76039 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
CDKL5O76039 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CDKL5O76039 RLIMP1-201ENST00000339626 1680 ntBASIC4.58□□□□□ -1.68
CDKL5O76039 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
CDKL5O76039 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.58□□□□□ -1.68
CDKL5O76039 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
CDKL5O76039 CASC19-280ENST00000642102 1351 ntBASIC4.58□□□□□ -1.68
CDKL5O76039 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CDKL5O76039 XIAPP3-201ENST00000312918 795 ntBASIC4.58□□□□□ -1.68
CDKL5O76039 Y_RNA.813-201ENST00000364639 102 ntBASIC4.58□□□□□ -1.68
CDKL5O76039 RNU6-769P-201ENST00000384407 104 ntBASIC4.58□□□□□ -1.68
CDKL5O76039 RNU6-876P-201ENST00000391295 104 ntBASIC4.58□□□□□ -1.68
CDKL5O76039 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC4.58□□□□□ -1.68
CDKL5O76039 RN7SKP266-201ENST00000410232 287 ntBASIC4.58□□□□□ -1.68
CDKL5O76039 RNU4-6P-201ENST00000410804 122 ntBASIC4.58□□□□□ -1.68
CDKL5O76039 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CDKL5O76039 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.58□□□□□ -1.68
CDKL5O76039 FTH1P6-201ENST00000430768 320 ntBASIC4.58□□□□□ -1.68
CDKL5O76039 MTCYBP45-201ENST00000435243 565 ntBASIC4.58□□□□□ -1.68
CDKL5O76039 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CDKL5O76039 USP9YP8-201ENST00000441913 500 ntBASIC4.58□□□□□ -1.68
CDKL5O76039 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC4.58□□□□□ -1.68
CDKL5O76039 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC4.58□□□□□ -1.68
CDKL5O76039 AC114755.5-201ENST00000447760 831 ntBASIC4.58□□□□□ -1.68
CDKL5O76039 AC079448.1-201ENST00000449377 373 ntBASIC4.58□□□□□ -1.68
CDKL5O76039 MTCO3P20-201ENST00000454926 688 ntBASIC4.58□□□□□ -1.68
CDKL5O76039 RPS15AP17-201ENST00000470598 390 ntBASIC4.58□□□□□ -1.68
CDKL5O76039 HMGB1P29-201ENST00000505659 499 ntBASIC4.58□□□□□ -1.68
CDKL5O76039 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC4.58□□□□□ -1.68
CDKL5O76039 RNU6-488P-201ENST00000515918 99 ntBASIC4.58□□□□□ -1.68
CDKL5O76039 AP003467.2-201ENST00000520175 319 ntBASIC4.58□□□□□ -1.68
CDKL5O76039 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CDKL5O76039 FAM92A1P1-201ENST00000528023 890 ntBASIC4.58□□□□□ -1.68
CDKL5O76039 AP003122.4-201ENST00000530980 758 ntBASIC4.58□□□□□ -1.68
CDKL5O76039 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC4.58□□□□□ -1.68
CDKL5O76039 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC4.58□□□□□ -1.68
CDKL5O76039 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC4.58□□□□□ -1.68
CDKL5O76039 HMGB1P33-201ENST00000563485 527 ntBASIC4.58□□□□□ -1.68
CDKL5O76039 AC090616.5-202ENST00000582111 297 ntBASIC4.58□□□□□ -1.68
CDKL5O76039 MIR4637-201ENST00000582405 84 ntBASIC4.58□□□□□ -1.68
CDKL5O76039 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms