Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 AC022790.1-201ENST00000522872 204 ntBASIC3.62□□□□□ -1.83
CACNA1FO60840 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC3.62□□□□□ -1.83
CACNA1FO60840 AC087465.1-201ENST00000560574 245 ntBASIC3.62□□□□□ -1.83
CACNA1FO60840 AC034105.3-201ENST00000565294 442 ntBASIC3.62□□□□□ -1.83
CACNA1FO60840 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
CACNA1FO60840 MIR4278-201ENST00000636094 69 ntBASIC3.62□□□□□ -1.83
CACNA1FO60840 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.61□□□□□ -1.83
CACNA1FO60840 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CACNA1FO60840 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CACNA1FO60840 ZNF807-201ENST00000328088 1707 ntBASIC3.61□□□□□ -1.83
CACNA1FO60840 AC114546.3-201ENST00000623582 1734 ntBASIC3.61□□□□□ -1.83
CACNA1FO60840 AL136964.1-201ENST00000622038 2990 ntBASIC3.61□□□□□ -1.83
CACNA1FO60840 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CACNA1FO60840 RNU6-304P-201ENST00000364855 107 ntBASIC3.61□□□□□ -1.83
CACNA1FO60840 RNU4-31P-201ENST00000384211 141 ntBASIC3.61□□□□□ -1.83
CACNA1FO60840 AC004987.3-201ENST00000413879 771 ntBASIC3.61□□□□□ -1.83
CACNA1FO60840 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC3.61□□□□□ -1.83
CACNA1FO60840 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC3.61□□□□□ -1.83
CACNA1FO60840 AC010153.1-201ENST00000432862 727 ntBASIC3.61□□□□□ -1.83
CACNA1FO60840 AC092393.1-201ENST00000439625 742 ntBASIC3.61□□□□□ -1.83
CACNA1FO60840 AC009961.3-201ENST00000449832 765 ntBASIC3.61□□□□□ -1.83
CACNA1FO60840 ZNF736P5Y-201ENST00000451173 805 ntBASIC3.61□□□□□ -1.83
CACNA1FO60840 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC3.61□□□□□ -1.83
CACNA1FO60840 AP004217.1-201ENST00000480579 346 ntBASIC3.61□□□□□ -1.83
CACNA1FO60840 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CACNA1FO60840 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC3.61□□□□□ -1.83
CACNA1FO60840 AC083906.5-201ENST00000503722 328 ntBASIC3.61□□□□□ -1.83
CACNA1FO60840 MTHFD2P4-201ENST00000515074 1025 ntBASIC3.61□□□□□ -1.83
CACNA1FO60840 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.61□□□□□ -1.83
CACNA1FO60840 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.61□□□□□ -1.83
CACNA1FO60840 AC010198.2-201ENST00000550612 259 ntBASIC3.61□□□□□ -1.83
CACNA1FO60840 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC3.61□□□□□ -1.83
CACNA1FO60840 NBEAP1-201ENST00000554452 979 ntBASIC3.61□□□□□ -1.83
CACNA1FO60840 AL049870.4-201ENST00000555741 486 ntBASIC3.61□□□□□ -1.83
CACNA1FO60840 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.61□□□□□ -1.83
CACNA1FO60840 AP001094.1-201ENST00000579805 193 ntBASIC3.61□□□□□ -1.83
CACNA1FO60840 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CACNA1FO60840 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC3.61□□□□□ -1.83
CACNA1FO60840 AC015688.2-201ENST00000584523 262 ntBASIC3.61□□□□□ -1.83
CACNA1FO60840 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.61□□□□□ -1.83
CACNA1FO60840 AL139286.2-201ENST00000606838 396 ntBASIC3.61□□□□□ -1.83
CACNA1FO60840 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.61□□□□□ -1.83
CACNA1FO60840 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
CACNA1FO60840 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CACNA1FO60840 AL390237.1-201ENST00000404226 1415 ntBASIC3.6□□□□□ -1.83
CACNA1FO60840 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CACNA1FO60840 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
CACNA1FO60840 Z75741.2-201ENST00000417272 1167 ntBASIC3.6□□□□□ -1.83
CACNA1FO60840 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC3.6□□□□□ -1.83
CACNA1FO60840 COX7BP2-201ENST00000437976 242 ntBASIC3.6□□□□□ -1.83
CACNA1FO60840 MTCYBP34-201ENST00000439552 670 ntBASIC3.6□□□□□ -1.83
CACNA1FO60840 UBE2V1P5-201ENST00000440070 405 ntBASIC3.6□□□□□ -1.83
CACNA1FO60840 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC3.6□□□□□ -1.83
CACNA1FO60840 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC3.6□□□□□ -1.83
CACNA1FO60840 AC096576.1-201ENST00000489014 359 ntBASIC3.6□□□□□ -1.83
CACNA1FO60840 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CACNA1FO60840 MTCO2P32-201ENST00000514865 403 ntBASIC3.6□□□□□ -1.83
CACNA1FO60840 ZDHHC20P3-201ENST00000531576 336 ntBASIC3.6□□□□□ -1.83
CACNA1FO60840 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC3.6□□□□□ -1.83
CACNA1FO60840 AC135001.1-201ENST00000544546 283 ntBASIC3.6□□□□□ -1.83
CACNA1FO60840 EIF4BP1-201ENST00000554881 351 ntBASIC3.6□□□□□ -1.83
CACNA1FO60840 AP001981.2-201ENST00000603241 418 ntBASIC3.6□□□□□ -1.83
CACNA1FO60840 AL139286.1-201ENST00000604465 483 ntBASIC3.6□□□□□ -1.83
CACNA1FO60840 AC106791.2-201ENST00000604680 391 ntBASIC3.6□□□□□ -1.83
CACNA1FO60840 AC010738.1-201ENST00000604970 987 ntBASIC3.6□□□□□ -1.83
CACNA1FO60840 VN1R74P-201ENST00000613259 503 ntBASIC3.6□□□□□ -1.83
CACNA1FO60840 AP004607.9-201ENST00000618202 316 ntBASIC3.6□□□□□ -1.83
CACNA1FO60840 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.6□□□□□ -1.83
CACNA1FO60840 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC3.6□□□□□ -1.83
CACNA1FO60840 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.6□□□□□ -1.83
CACNA1FO60840 MTND5P29-201ENST00000458676 1807 ntBASIC3.6□□□□□ -1.83
CACNA1FO60840 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
CACNA1FO60840 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.6□□□□□ -1.83
CACNA1FO60840 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
CACNA1FO60840 Y_RNA.465-201ENST00000384293 102 ntBASIC3.6□□□□□ -1.83
CACNA1FO60840 RNU6-920P-201ENST00000410926 92 ntBASIC3.6□□□□□ -1.83
CACNA1FO60840 AF274854.1-201ENST00000413236 615 ntBASIC3.6□□□□□ -1.83
CACNA1FO60840 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC3.6□□□□□ -1.83
CACNA1FO60840 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC3.6□□□□□ -1.83
CACNA1FO60840 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC3.6□□□□□ -1.83
CACNA1FO60840 AC009965.2-201ENST00000425328 970 ntBASIC3.6□□□□□ -1.83
CACNA1FO60840 RPL21P40-201ENST00000428586 483 ntBASIC3.6□□□□□ -1.83
CACNA1FO60840 AL589823.1-201ENST00000429577 183 ntBASIC3.6□□□□□ -1.83
CACNA1FO60840 MTND1P32-201ENST00000433043 938 ntBASIC3.6□□□□□ -1.83
CACNA1FO60840 HMGB1P45-201ENST00000435986 653 ntBASIC3.6□□□□□ -1.83
CACNA1FO60840 SETP5-201ENST00000437270 562 ntBASIC3.6□□□□□ -1.83
CACNA1FO60840 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC3.6□□□□□ -1.83
CACNA1FO60840 CDC42P1-201ENST00000456658 548 ntBASIC3.6□□□□□ -1.83
CACNA1FO60840 RNU7-27P-201ENST00000459281 62 ntBASIC3.6□□□□□ -1.83
CACNA1FO60840 AP001486.1-201ENST00000463339 476 ntBASIC3.6□□□□□ -1.83
CACNA1FO60840 RAP1BP2-201ENST00000478270 544 ntBASIC3.6□□□□□ -1.83
CACNA1FO60840 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CACNA1FO60840 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC3.6□□□□□ -1.83
CACNA1FO60840 AC108471.1-201ENST00000513977 287 ntBASIC3.6□□□□□ -1.83
CACNA1FO60840 AC060788.1-201ENST00000521318 469 ntBASIC3.6□□□□□ -1.83
CACNA1FO60840 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CACNA1FO60840 FAM60DP-201ENST00000524174 632 ntBASIC3.6□□□□□ -1.83
CACNA1FO60840 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC3.6□□□□□ -1.83
CACNA1FO60840 OR6R2P-201ENST00000609216 300 ntBASIC3.6□□□□□ -1.83
CACNA1FO60840 AC090115.4-201ENST00000609970 188 ntBASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms