Protein–RNA interactions for Protein: O60264

SMARCA5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5, humanhuman

Predicted RBP Predictions only

Length 1,052 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5O60264 RNA5SP372-201ENST00000390836 115 ntBASIC5.39□□□□□ -1.55
SMARCA5O60264 SNORD66.1-201ENST00000391230 76 ntBASIC5.39□□□□□ -1.55
SMARCA5O60264 ERMN-204ENST00000409925 556 ntTSL 4 BASIC5.39□□□□□ -1.55
SMARCA5O60264 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC5.39□□□□□ -1.55
SMARCA5O60264 VDAC1P9-201ENST00000412766 841 ntBASIC5.39□□□□□ -1.55
SMARCA5O60264 EEF1A1P40-201ENST00000412883 573 ntBASIC5.39□□□□□ -1.55
SMARCA5O60264 RPL36AP36-201ENST00000418616 301 ntBASIC5.39□□□□□ -1.55
SMARCA5O60264 B3GALNT1P1-201ENST00000420569 975 ntBASIC5.39□□□□□ -1.55
SMARCA5O60264 AL445669.1-201ENST00000426743 755 ntBASIC5.39□□□□□ -1.55
SMARCA5O60264 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC5.39□□□□□ -1.55
SMARCA5O60264 RPS3AP14-201ENST00000483907 780 ntBASIC5.39□□□□□ -1.55
SMARCA5O60264 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC5.39□□□□□ -1.55
SMARCA5O60264 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC5.39□□□□□ -1.55
SMARCA5O60264 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SMARCA5O60264 AC017037.2-201ENST00000513850 890 ntBASIC5.39□□□□□ -1.55
SMARCA5O60264 MTCO2P4-201ENST00000517968 247 ntBASIC5.39□□□□□ -1.55
SMARCA5O60264 AP003497.1-201ENST00000528472 562 ntBASIC5.39□□□□□ -1.55
SMARCA5O60264 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC5.39□□□□□ -1.55
SMARCA5O60264 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC5.39□□□□□ -1.55
SMARCA5O60264 AC008752.3-201ENST00000588113 712 ntBASIC5.39□□□□□ -1.55
SMARCA5O60264 AC060780.3-201ENST00000589464 80 ntBASIC5.39□□□□□ -1.55
SMARCA5O60264 AC079587.1-201ENST00000603846 277 ntBASIC5.39□□□□□ -1.55
SMARCA5O60264 AL139286.1-201ENST00000604465 483 ntBASIC5.39□□□□□ -1.55
SMARCA5O60264 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC5.39□□□□□ -1.55
SMARCA5O60264 AC112204.3-201ENST00000623822 332 ntBASIC5.39□□□□□ -1.55
SMARCA5O60264 AC068880.5-201ENST00000624331 290 ntBASIC5.39□□□□□ -1.55
SMARCA5O60264 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC5.39□□□□□ -1.55
SMARCA5O60264 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
SMARCA5O60264 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
SMARCA5O60264 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SMARCA5O60264 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SMARCA5O60264 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SMARCA5O60264 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC5.38□□□□□ -1.55
SMARCA5O60264 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC5.38□□□□□ -1.55
SMARCA5O60264 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
SMARCA5O60264 USP8P1-201ENST00000494673 3183 ntBASIC5.38□□□□□ -1.55
SMARCA5O60264 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
SMARCA5O60264 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
SMARCA5O60264 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
SMARCA5O60264 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
SMARCA5O60264 RNA5SP22-201ENST00000365393 109 ntBASIC5.38□□□□□ -1.55
SMARCA5O60264 NFIB-202ENST00000380924 840 ntTSL 5 BASIC5.38□□□□□ -1.55
SMARCA5O60264 RNU6-1074P-201ENST00000383995 104 ntBASIC5.38□□□□□ -1.55
SMARCA5O60264 AL359704.1-201ENST00000411586 781 ntBASIC5.38□□□□□ -1.55
SMARCA5O60264 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SMARCA5O60264 RPL21P111-201ENST00000418453 477 ntBASIC5.38□□□□□ -1.55
SMARCA5O60264 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC5.38□□□□□ -1.55
SMARCA5O60264 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC5.38□□□□□ -1.55
SMARCA5O60264 AC234775.1-201ENST00000454247 670 ntBASIC5.38□□□□□ -1.55
SMARCA5O60264 AC079804.1-201ENST00000461922 436 ntBASIC5.38□□□□□ -1.55
SMARCA5O60264 CREM-230ENST00000474931 626 ntTSL 2 BASIC5.38□□□□□ -1.55
SMARCA5O60264 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC5.38□□□□□ -1.55
SMARCA5O60264 SNORA18.6-201ENST00000516792 115 ntBASIC5.38□□□□□ -1.55
SMARCA5O60264 RNU6-1003P-201ENST00000517099 105 ntBASIC5.38□□□□□ -1.55
SMARCA5O60264 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC5.38□□□□□ -1.55
SMARCA5O60264 CENPUP1-201ENST00000526649 1202 ntBASIC5.38□□□□□ -1.55
SMARCA5O60264 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC5.38□□□□□ -1.55
SMARCA5O60264 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC5.38□□□□□ -1.55
SMARCA5O60264 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC5.38□□□□□ -1.55
SMARCA5O60264 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC5.38□□□□□ -1.55
SMARCA5O60264 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC5.38□□□□□ -1.55
SMARCA5O60264 BNIP3P8-201ENST00000597863 560 ntBASIC5.38□□□□□ -1.55
SMARCA5O60264 AC135507.2-201ENST00000612443 309 ntBASIC5.38□□□□□ -1.55
SMARCA5O60264 AC008250.2-201ENST00000615261 205 ntBASIC5.38□□□□□ -1.55
SMARCA5O60264 AL138721.1-201ENST00000616756 179 ntBASIC5.38□□□□□ -1.55
SMARCA5O60264 AC104010.1-201ENST00000616889 150 ntBASIC5.38□□□□□ -1.55
SMARCA5O60264 MIR6130-201ENST00000619419 109 ntBASIC5.38□□□□□ -1.55
SMARCA5O60264 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC5.38□□□□□ -1.55
SMARCA5O60264 AC112487.2-201ENST00000637950 304 ntBASIC5.38□□□□□ -1.55
SMARCA5O60264 AC011460.1-201ENST00000636268 1834 ntBASIC5.38□□□□□ -1.55
SMARCA5O60264 CCT4P2-201ENST00000233836 1548 ntBASIC5.38□□□□□ -1.55
SMARCA5O60264 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC5.38□□□□□ -1.55
SMARCA5O60264 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC5.37□□□□□ -1.55
SMARCA5O60264 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SMARCA5O60264 DLD-204ENST00000437604 1859 ntTSL 2 BASIC5.37□□□□□ -1.55
SMARCA5O60264 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
SMARCA5O60264 OR5P1P-201ENST00000299512 925 ntBASIC5.37□□□□□ -1.55
SMARCA5O60264 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SMARCA5O60264 RNU11-4P-201ENST00000391149 133 ntBASIC5.37□□□□□ -1.55
SMARCA5O60264 AL356057.2-201ENST00000403318 432 ntBASIC5.37□□□□□ -1.55
SMARCA5O60264 HDGFP1-201ENST00000405943 252 ntBASIC5.37□□□□□ -1.55
SMARCA5O60264 AC009237.10-201ENST00000414112 510 ntBASIC5.37□□□□□ -1.55
SMARCA5O60264 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC5.37□□□□□ -1.55
SMARCA5O60264 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC5.37□□□□□ -1.55
SMARCA5O60264 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC5.37□□□□□ -1.55
SMARCA5O60264 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SMARCA5O60264 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC5.37□□□□□ -1.55
SMARCA5O60264 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC5.37□□□□□ -1.55
SMARCA5O60264 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC5.37□□□□□ -1.55
SMARCA5O60264 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC5.37□□□□□ -1.55
SMARCA5O60264 CBX1P1-201ENST00000440184 427 ntBASIC5.37□□□□□ -1.55
SMARCA5O60264 AC007677.1-201ENST00000445757 515 ntBASIC5.37□□□□□ -1.55
SMARCA5O60264 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC5.37□□□□□ -1.55
SMARCA5O60264 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC5.37□□□□□ -1.55
SMARCA5O60264 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC5.37□□□□□ -1.55
SMARCA5O60264 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC5.37□□□□□ -1.55
SMARCA5O60264 RPS29P25-201ENST00000481709 171 ntBASIC5.37□□□□□ -1.55
SMARCA5O60264 AC012158.1-204ENST00000483430 465 ntBASIC5.37□□□□□ -1.55
SMARCA5O60264 AC114786.4-201ENST00000508771 728 ntBASIC5.37□□□□□ -1.55
SMARCA5O60264 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 130.7 ms