Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 AL137847.3-201ENST00000611521 109 ntBASIC2.04□□□□□ -2.08
PDE6DO43924 HMGB1P24-202ENST00000615653 685 ntBASIC2.04□□□□□ -2.08
PDE6DO43924 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.04□□□□□ -2.08
PDE6DO43924 AC009812.4-201ENST00000569134 1805 ntBASIC2.03□□□□□ -2.08
PDE6DO43924 CR848007.1-201ENST00000442354 1699 ntBASIC2.03□□□□□ -2.08
PDE6DO43924 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC2.03□□□□□ -2.08
PDE6DO43924 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.03□□□□□ -2.08
PDE6DO43924 FRG1BP-201ENST00000278882 761 ntBASIC2.03□□□□□ -2.08
PDE6DO43924 AL596028.1-201ENST00000326971 197 ntBASIC2.03□□□□□ -2.08
PDE6DO43924 SNORA63.1-201ENST00000362493 131 ntBASIC2.03□□□□□ -2.08
PDE6DO43924 SNORD82-201ENST00000365530 70 ntBASIC2.03□□□□□ -2.08
PDE6DO43924 MIR490-201ENST00000384865 128 ntBASIC2.03□□□□□ -2.08
PDE6DO43924 SNORA48.5-201ENST00000391143 135 ntBASIC2.03□□□□□ -2.08
PDE6DO43924 RNU6-1197P-201ENST00000391183 107 ntBASIC2.03□□□□□ -2.08
PDE6DO43924 AC245052.5-201ENST00000416320 649 ntBASIC2.03□□□□□ -2.08
PDE6DO43924 AC233981.1-201ENST00000423224 461 ntBASIC2.03□□□□□ -2.08
PDE6DO43924 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
PDE6DO43924 C4BPAP2-201ENST00000428434 478 ntBASIC2.03□□□□□ -2.08
PDE6DO43924 AC022018.1-201ENST00000430685 241 ntBASIC2.03□□□□□ -2.08
PDE6DO43924 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC2.03□□□□□ -2.08
PDE6DO43924 PGBD4P3-201ENST00000440731 581 ntBASIC2.03□□□□□ -2.08
PDE6DO43924 AC112653.1-201ENST00000443851 386 ntBASIC2.03□□□□□ -2.08
PDE6DO43924 WASF1P1-201ENST00000447560 1131 ntBASIC2.03□□□□□ -2.08
PDE6DO43924 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
PDE6DO43924 RPL37P4-201ENST00000448908 268 ntBASIC2.03□□□□□ -2.08
PDE6DO43924 AC112492.1-201ENST00000449607 712 ntBASIC2.03□□□□□ -2.08
PDE6DO43924 AL139109.1-201ENST00000455491 297 ntBASIC2.03□□□□□ -2.08
PDE6DO43924 BTF3P5-201ENST00000457252 467 ntBASIC2.03□□□□□ -2.08
PDE6DO43924 RNU7-26P-201ENST00000458980 63 ntBASIC2.03□□□□□ -2.08
PDE6DO43924 snoU13.28-201ENST00000459235 104 ntBASIC2.03□□□□□ -2.08
PDE6DO43924 AC078857.1-201ENST00000469870 667 ntBASIC2.03□□□□□ -2.08
PDE6DO43924 SNORA74D-201ENST00000516404 141 ntBASIC2.03□□□□□ -2.08
PDE6DO43924 NDUFS5P6-201ENST00000529136 295 ntBASIC2.03□□□□□ -2.08
PDE6DO43924 LSM6P2-201ENST00000552208 177 ntBASIC2.03□□□□□ -2.08
PDE6DO43924 PRELID2P1-201ENST00000552837 301 ntBASIC2.03□□□□□ -2.08
PDE6DO43924 HMGB1P14-201ENST00000557424 591 ntBASIC2.03□□□□□ -2.08
PDE6DO43924 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.03□□□□□ -2.08
PDE6DO43924 ISCA1P3-201ENST00000577104 373 ntBASIC2.03□□□□□ -2.08
PDE6DO43924 MIR5680-201ENST00000577577 84 ntBASIC2.03□□□□□ -2.08
PDE6DO43924 MIR3117-201ENST00000584034 78 ntBASIC2.03□□□□□ -2.08
PDE6DO43924 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC2.03□□□□□ -2.08
PDE6DO43924 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC2.03□□□□□ -2.08
PDE6DO43924 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.03□□□□□ -2.08
PDE6DO43924 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC2.03□□□□□ -2.08
PDE6DO43924 AL356280.1-201ENST00000603614 379 ntBASIC2.03□□□□□ -2.08
PDE6DO43924 AC010738.1-201ENST00000604970 987 ntBASIC2.03□□□□□ -2.08
PDE6DO43924 AP000254.1-201ENST00000609934 520 ntBASIC2.03□□□□□ -2.08
PDE6DO43924 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.03□□□□□ -2.08
PDE6DO43924 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.03□□□□□ -2.08
PDE6DO43924 FRG1HP-204ENST00000617940 757 ntBASIC2.03□□□□□ -2.08
PDE6DO43924 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.03□□□□□ -2.08
PDE6DO43924 AC009318.4-201ENST00000620496 486 ntBASIC2.03□□□□□ -2.08
PDE6DO43924 CRYM-AS1-204ENST00000637983 556 ntBASIC2.03□□□□□ -2.08
PDE6DO43924 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
PDE6DO43924 TPTE2P4-201ENST00000258589 1605 ntBASIC2.02□□□□□ -2.09
PDE6DO43924 MTCO1P18-201ENST00000455518 1419 ntBASIC2.02□□□□□ -2.09
PDE6DO43924 AC025263.3-201ENST00000622965 1396 ntBASIC2.02□□□□□ -2.09
PDE6DO43924 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.02□□□□□ -2.09
PDE6DO43924 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
PDE6DO43924 AC126755.2-208ENST00000327792 462 ntBASIC2.02□□□□□ -2.09
PDE6DO43924 AC138969.1-213ENST00000331436 462 ntBASIC2.02□□□□□ -2.09
PDE6DO43924 RNA5SP124-201ENST00000362739 110 ntBASIC2.02□□□□□ -2.09
PDE6DO43924 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.02□□□□□ -2.09
PDE6DO43924 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC2.02□□□□□ -2.09
PDE6DO43924 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.02□□□□□ -2.09
PDE6DO43924 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC2.02□□□□□ -2.09
PDE6DO43924 AC112220.1-201ENST00000434628 355 ntBASIC2.02□□□□□ -2.09
PDE6DO43924 AC007389.2-201ENST00000434630 306 ntBASIC2.02□□□□□ -2.09
PDE6DO43924 RPS26P30-201ENST00000443431 335 ntBASIC2.02□□□□□ -2.09
PDE6DO43924 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC2.02□□□□□ -2.09
PDE6DO43924 AL358232.1-201ENST00000448030 501 ntBASIC2.02□□□□□ -2.09
PDE6DO43924 CACYBPP2-201ENST00000453625 678 ntBASIC2.02□□□□□ -2.09
PDE6DO43924 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.02□□□□□ -2.09
PDE6DO43924 AC087588.1-201ENST00000462203 316 ntBASIC2.02□□□□□ -2.09
PDE6DO43924 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.02□□□□□ -2.09
PDE6DO43924 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC2.02□□□□□ -2.09
PDE6DO43924 AC008427.1-201ENST00000503102 655 ntBASIC2.02□□□□□ -2.09
PDE6DO43924 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC2.02□□□□□ -2.09
PDE6DO43924 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC2.02□□□□□ -2.09
PDE6DO43924 AC104108.1-201ENST00000509930 412 ntBASIC2.02□□□□□ -2.09
PDE6DO43924 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC2.02□□□□□ -2.09
PDE6DO43924 RN7SKP57-201ENST00000517248 293 ntBASIC2.02□□□□□ -2.09
PDE6DO43924 PSMA2P1-201ENST00000526365 646 ntBASIC2.02□□□□□ -2.09
PDE6DO43924 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
PDE6DO43924 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC2.02□□□□□ -2.09
PDE6DO43924 VN1R88P-201ENST00000596787 292 ntBASIC2.02□□□□□ -2.09
PDE6DO43924 AL606834.2-201ENST00000602954 668 ntBASIC2.02□□□□□ -2.09
PDE6DO43924 AL022099.1-201ENST00000604551 712 ntBASIC2.02□□□□□ -2.09
PDE6DO43924 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.02□□□□□ -2.09
PDE6DO43924 MIR6840-201ENST00000611937 71 ntBASIC2.02□□□□□ -2.09
PDE6DO43924 AC009032.1-201ENST00000617574 431 ntBASIC2.02□□□□□ -2.09
PDE6DO43924 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.02□□□□□ -2.09
PDE6DO43924 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
PDE6DO43924 AC008568.2-201ENST00000623862 2313 ntBASIC2.02□□□□□ -2.09
PDE6DO43924 NUP58P1-201ENST00000502546 1738 ntBASIC2.02□□□□□ -2.09
PDE6DO43924 TAB3P1-202ENST00000452645 1634 ntBASIC2.02□□□□□ -2.09
PDE6DO43924 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.02□□□□□ -2.09
PDE6DO43924 AC000403.1-201ENST00000613696 3585 ntBASIC2.02□□□□□ -2.09
PDE6DO43924 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
PDE6DO43924 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms