Protein–RNA interactions for Protein: O15457

MSH4, MutS protein homolog 4, humanhuman

Predictions only

Length 936 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4O15457 XIAPP1-201ENST00000603162 600 ntBASIC3.17□□□□□ -1.9
MSH4O15457 MIR7106-201ENST00000612419 65 ntBASIC3.17□□□□□ -1.9
MSH4O15457 AC092184.1-201ENST00000625042 715 ntBASIC3.17□□□□□ -1.9
MSH4O15457 AP003485.1-201ENST00000625093 753 ntBASIC3.17□□□□□ -1.9
MSH4O15457 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.17□□□□□ -1.9
MSH4O15457 MFSD8-245ENST00000641743 948 ntBASIC3.17□□□□□ -1.9
MSH4O15457 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.17□□□□□ -1.9
MSH4O15457 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.17□□□□□ -1.9
MSH4O15457 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
MSH4O15457 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
MSH4O15457 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
MSH4O15457 NUP58P1-201ENST00000502546 1738 ntBASIC3.16□□□□□ -1.9
MSH4O15457 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.16□□□□□ -1.9
MSH4O15457 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.16□□□□□ -1.9
MSH4O15457 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.16□□□□□ -1.9
MSH4O15457 RNU1-112P-201ENST00000364401 164 ntBASIC3.16□□□□□ -1.9
MSH4O15457 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
MSH4O15457 MIR181A2-201ENST00000384863 110 ntBASIC3.16□□□□□ -1.9
MSH4O15457 AC016769.3-201ENST00000396562 315 ntBASIC3.16□□□□□ -1.9
MSH4O15457 MTCO1P56-201ENST00000401674 224 ntBASIC3.16□□□□□ -1.9
MSH4O15457 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.16□□□□□ -1.9
MSH4O15457 RNU2-71P-201ENST00000411395 189 ntBASIC3.16□□□□□ -1.9
MSH4O15457 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.16□□□□□ -1.9
MSH4O15457 AC087499.2-201ENST00000432861 149 ntBASIC3.16□□□□□ -1.9
MSH4O15457 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC3.16□□□□□ -1.9
MSH4O15457 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.16□□□□□ -1.9
MSH4O15457 AC105272.1-201ENST00000438604 198 ntBASIC3.16□□□□□ -1.9
MSH4O15457 AC093155.1-201ENST00000440164 826 ntBASIC3.16□□□□□ -1.9
MSH4O15457 AL662791.1-201ENST00000441992 928 ntBASIC3.16□□□□□ -1.9
MSH4O15457 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC3.16□□□□□ -1.9
MSH4O15457 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
MSH4O15457 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.16□□□□□ -1.9
MSH4O15457 RNA5SP380-201ENST00000517190 98 ntBASIC3.16□□□□□ -1.9
MSH4O15457 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC3.16□□□□□ -1.9
MSH4O15457 AP001189.2-201ENST00000527320 189 ntBASIC3.16□□□□□ -1.9
MSH4O15457 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC3.16□□□□□ -1.9
MSH4O15457 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.16□□□□□ -1.9
MSH4O15457 GTF3AP2-201ENST00000557014 266 ntBASIC3.16□□□□□ -1.9
MSH4O15457 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.16□□□□□ -1.9
MSH4O15457 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC3.16□□□□□ -1.9
MSH4O15457 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.16□□□□□ -1.9
MSH4O15457 AC091946.2-201ENST00000606105 291 ntBASIC3.16□□□□□ -1.9
MSH4O15457 AC018645.2-201ENST00000609151 472 ntBASIC3.16□□□□□ -1.9
MSH4O15457 AC018755.4-201ENST00000619715 454 ntBASIC3.16□□□□□ -1.9
MSH4O15457 SCARNA15.3-201ENST00000626315 122 ntBASIC3.16□□□□□ -1.9
MSH4O15457 SCARNA4.1-201ENST00000628597 123 ntBASIC3.16□□□□□ -1.9
MSH4O15457 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
MSH4O15457 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
MSH4O15457 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.16□□□□□ -1.9
MSH4O15457 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
MSH4O15457 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
MSH4O15457 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
MSH4O15457 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.16□□□□□ -1.9
MSH4O15457 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
MSH4O15457 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
MSH4O15457 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
MSH4O15457 AL365361.1-201ENST00000566942 3481 ntBASIC3.16□□□□□ -1.9
MSH4O15457 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
MSH4O15457 AC004925.1-201ENST00000624256 2706 ntBASIC3.15□□□□□ -1.9
MSH4O15457 AC138915.3-201ENST00000562908 1389 ntBASIC3.15□□□□□ -1.9
MSH4O15457 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
MSH4O15457 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
MSH4O15457 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
MSH4O15457 RNU6-7-201ENST00000364784 107 ntBASIC3.15□□□□□ -1.91
MSH4O15457 RNU6-8-201ENST00000365467 107 ntBASIC3.15□□□□□ -1.91
MSH4O15457 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.15□□□□□ -1.91
MSH4O15457 SNORD65.1-201ENST00000390889 71 ntBASIC3.15□□□□□ -1.91
MSH4O15457 AL451074.5-201ENST00000415894 435 ntBASIC3.15□□□□□ -1.91
MSH4O15457 MTCO3P12-201ENST00000416718 547 ntBASIC3.15□□□□□ -1.91
MSH4O15457 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.15□□□□□ -1.91
MSH4O15457 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC3.15□□□□□ -1.91
MSH4O15457 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.15□□□□□ -1.91
MSH4O15457 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.15□□□□□ -1.91
MSH4O15457 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.15□□□□□ -1.91
MSH4O15457 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.15□□□□□ -1.91
MSH4O15457 AC003982.1-202ENST00000469928 248 ntBASIC3.15□□□□□ -1.91
MSH4O15457 AC092185.1-201ENST00000491371 97 ntBASIC3.15□□□□□ -1.91
MSH4O15457 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.15□□□□□ -1.91
MSH4O15457 AC027309.2-201ENST00000520566 192 ntBASIC3.15□□□□□ -1.91
MSH4O15457 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.15□□□□□ -1.91
MSH4O15457 HPRT1P3-201ENST00000539521 576 ntBASIC3.15□□□□□ -1.91
MSH4O15457 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.15□□□□□ -1.91
MSH4O15457 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
MSH4O15457 ELOCP29-201ENST00000588193 334 ntBASIC3.15□□□□□ -1.91
MSH4O15457 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC3.15□□□□□ -1.91
MSH4O15457 AC073387.2-201ENST00000604797 784 ntBASIC3.15□□□□□ -1.91
MSH4O15457 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.15□□□□□ -1.91
MSH4O15457 AC010338.1-201ENST00000621823 717 ntBASIC3.15□□□□□ -1.91
MSH4O15457 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.15□□□□□ -1.91
MSH4O15457 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.15□□□□□ -1.91
MSH4O15457 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
MSH4O15457 GDI2P1-201ENST00000429312 1336 ntBASIC3.15□□□□□ -1.91
MSH4O15457 MTND5P19-201ENST00000424872 1794 ntBASIC3.15□□□□□ -1.91
MSH4O15457 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
MSH4O15457 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.14□□□□□ -1.91
MSH4O15457 MTND5P27-201ENST00000428871 1720 ntBASIC3.14□□□□□ -1.91
MSH4O15457 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
MSH4O15457 RNU6-224P-201ENST00000384055 107 ntBASIC3.14□□□□□ -1.91
MSH4O15457 U3.29-201ENST00000391296 212 ntBASIC3.14□□□□□ -1.91
MSH4O15457 AL355143.1-201ENST00000407101 841 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms