Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 OR10AB1P-201ENST00000609613 938 ntBASIC3.89□□□□□ -1.79
TCRBV7S3A2A0A539 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.89□□□□□ -1.79
TCRBV7S3A2A0A539 AL158801.5-201ENST00000623123 465 ntBASIC3.89□□□□□ -1.79
TCRBV7S3A2A0A539 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.89□□□□□ -1.79
TCRBV7S3A2A0A539 PISRT1-201ENST00000626175 531 ntBASIC3.89□□□□□ -1.79
TCRBV7S3A2A0A539 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
TCRBV7S3A2A0A539 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
TCRBV7S3A2A0A539 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
TCRBV7S3A2A0A539 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.89□□□□□ -1.79
TCRBV7S3A2A0A539 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.89□□□□□ -1.79
TCRBV7S3A2A0A539 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.89□□□□□ -1.79
TCRBV7S3A2A0A539 AC092125.1-201ENST00000562568 1995 ntBASIC3.89□□□□□ -1.79
TCRBV7S3A2A0A539 MTND5P26-201ENST00000426018 1752 ntBASIC3.89□□□□□ -1.79
TCRBV7S3A2A0A539 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
TCRBV7S3A2A0A539 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
TCRBV7S3A2A0A539 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
TCRBV7S3A2A0A539 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
TCRBV7S3A2A0A539 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
TCRBV7S3A2A0A539 Y_RNA.516-201ENST00000384541 124 ntBASIC3.88□□□□□ -1.79
TCRBV7S3A2A0A539 FCF1P10-201ENST00000407590 479 ntBASIC3.88□□□□□ -1.79
TCRBV7S3A2A0A539 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.88□□□□□ -1.79
TCRBV7S3A2A0A539 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC3.88□□□□□ -1.79
TCRBV7S3A2A0A539 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.88□□□□□ -1.79
TCRBV7S3A2A0A539 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.88□□□□□ -1.79
TCRBV7S3A2A0A539 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.88□□□□□ -1.79
TCRBV7S3A2A0A539 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.88□□□□□ -1.79
TCRBV7S3A2A0A539 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.88□□□□□ -1.79
TCRBV7S3A2A0A539 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC3.88□□□□□ -1.79
TCRBV7S3A2A0A539 AC073614.1-201ENST00000438690 650 ntBASIC3.88□□□□□ -1.79
TCRBV7S3A2A0A539 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC3.88□□□□□ -1.79
TCRBV7S3A2A0A539 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.88□□□□□ -1.79
TCRBV7S3A2A0A539 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.88□□□□□ -1.79
TCRBV7S3A2A0A539 AC098824.1-201ENST00000453565 980 ntBASIC3.88□□□□□ -1.79
TCRBV7S3A2A0A539 MTND1P9-201ENST00000453775 944 ntBASIC3.88□□□□□ -1.79
TCRBV7S3A2A0A539 AC099563.1-201ENST00000456086 418 ntBASIC3.88□□□□□ -1.79
TCRBV7S3A2A0A539 RPL7P19-201ENST00000469948 618 ntBASIC3.88□□□□□ -1.79
TCRBV7S3A2A0A539 AC006463.2-201ENST00000473326 348 ntBASIC3.88□□□□□ -1.79
TCRBV7S3A2A0A539 RPL9P33-201ENST00000484311 566 ntBASIC3.88□□□□□ -1.79
TCRBV7S3A2A0A539 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
TCRBV7S3A2A0A539 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.88□□□□□ -1.79
TCRBV7S3A2A0A539 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
TCRBV7S3A2A0A539 AC006390.1-201ENST00000508068 283 ntBASIC3.88□□□□□ -1.79
TCRBV7S3A2A0A539 PTGES3P3-201ENST00000511479 482 ntBASIC3.88□□□□□ -1.79
TCRBV7S3A2A0A539 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.88□□□□□ -1.79
TCRBV7S3A2A0A539 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.88□□□□□ -1.79
TCRBV7S3A2A0A539 SNORA18.6-201ENST00000516792 115 ntBASIC3.88□□□□□ -1.79
TCRBV7S3A2A0A539 RNU2-46P-201ENST00000517038 113 ntBASIC3.88□□□□□ -1.79
TCRBV7S3A2A0A539 MTCO2P4-201ENST00000517968 247 ntBASIC3.88□□□□□ -1.79
TCRBV7S3A2A0A539 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.88□□□□□ -1.79
TCRBV7S3A2A0A539 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3.88□□□□□ -1.79
TCRBV7S3A2A0A539 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
TCRBV7S3A2A0A539 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.88□□□□□ -1.79
TCRBV7S3A2A0A539 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.88□□□□□ -1.79
TCRBV7S3A2A0A539 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.88□□□□□ -1.79
TCRBV7S3A2A0A539 HMGN1P30-201ENST00000589286 268 ntBASIC3.88□□□□□ -1.79
TCRBV7S3A2A0A539 CKS1BP3-201ENST00000600888 237 ntBASIC3.88□□□□□ -1.79
TCRBV7S3A2A0A539 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC3.88□□□□□ -1.79
TCRBV7S3A2A0A539 MIR6758-201ENST00000620653 63 ntBASIC3.88□□□□□ -1.79
TCRBV7S3A2A0A539 AC002550.2-201ENST00000621246 394 ntBASIC3.88□□□□□ -1.79
TCRBV7S3A2A0A539 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC3.88□□□□□ -1.79
TCRBV7S3A2A0A539 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
TCRBV7S3A2A0A539 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.88□□□□□ -1.79
TCRBV7S3A2A0A539 MIR492-201ENST00000638676 116 ntBASIC3.88□□□□□ -1.79
TCRBV7S3A2A0A539 AC099654.12-201ENST00000639868 649 ntBASIC3.88□□□□□ -1.79
TCRBV7S3A2A0A539 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
TCRBV7S3A2A0A539 AC011460.1-201ENST00000636268 1834 ntBASIC3.88□□□□□ -1.79
TCRBV7S3A2A0A539 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
TCRBV7S3A2A0A539 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
TCRBV7S3A2A0A539 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.88□□□□□ -1.79
TCRBV7S3A2A0A539 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.87□□□□□ -1.79
TCRBV7S3A2A0A539 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
TCRBV7S3A2A0A539 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
TCRBV7S3A2A0A539 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
TCRBV7S3A2A0A539 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC3.87□□□□□ -1.79
TCRBV7S3A2A0A539 AC073073.2-201ENST00000609827 2578 ntBASIC3.87□□□□□ -1.79
TCRBV7S3A2A0A539 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.87□□□□□ -1.79
TCRBV7S3A2A0A539 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC3.87□□□□□ -1.79
TCRBV7S3A2A0A539 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
TCRBV7S3A2A0A539 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.87□□□□□ -1.79
TCRBV7S3A2A0A539 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC3.87□□□□□ -1.79
TCRBV7S3A2A0A539 MTND5P3-201ENST00000438536 1800 ntBASIC3.87□□□□□ -1.79
TCRBV7S3A2A0A539 U8.3-201ENST00000363321 132 ntBASIC3.87□□□□□ -1.79
TCRBV7S3A2A0A539 RNU6-517P-201ENST00000384362 110 ntBASIC3.87□□□□□ -1.79
TCRBV7S3A2A0A539 AL022722.2-201ENST00000402519 180 ntBASIC3.87□□□□□ -1.79
TCRBV7S3A2A0A539 RNA5SP317-201ENST00000410176 116 ntBASIC3.87□□□□□ -1.79
TCRBV7S3A2A0A539 RNA5SP311-201ENST00000411290 116 ntBASIC3.87□□□□□ -1.79
TCRBV7S3A2A0A539 SPA17P1-201ENST00000416656 452 ntBASIC3.87□□□□□ -1.79
TCRBV7S3A2A0A539 C1DP2-201ENST00000418167 426 ntBASIC3.87□□□□□ -1.79
TCRBV7S3A2A0A539 RPS12P23-201ENST00000419579 400 ntBASIC3.87□□□□□ -1.79
TCRBV7S3A2A0A539 AC104651.1-201ENST00000427559 735 ntBASIC3.87□□□□□ -1.79
TCRBV7S3A2A0A539 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.87□□□□□ -1.79
TCRBV7S3A2A0A539 UBE2V1P13-201ENST00000436983 439 ntBASIC3.87□□□□□ -1.79
TCRBV7S3A2A0A539 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC3.87□□□□□ -1.79
TCRBV7S3A2A0A539 AL049734.2-201ENST00000441066 616 ntBASIC3.87□□□□□ -1.79
TCRBV7S3A2A0A539 AC112653.1-201ENST00000443851 386 ntBASIC3.87□□□□□ -1.79
TCRBV7S3A2A0A539 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.87□□□□□ -1.79
TCRBV7S3A2A0A539 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.87□□□□□ -1.79
TCRBV7S3A2A0A539 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC3.87□□□□□ -1.79
TCRBV7S3A2A0A539 NDUFAF4P4-201ENST00000454883 502 ntBASIC3.87□□□□□ -1.79
TCRBV7S3A2A0A539 RPS23P7-201ENST00000466210 444 ntBASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms