Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 AC091390.3-201ENST00000426478 338 ntBASIC1.84□□□□□ -2.11
TRAV30A0A087WSZ9 AL513175.1-201ENST00000431492 780 ntBASIC1.84□□□□□ -2.11
TRAV30A0A087WSZ9 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC1.84□□□□□ -2.11
TRAV30A0A087WSZ9 FCF1P1-201ENST00000432690 571 ntBASIC1.84□□□□□ -2.11
TRAV30A0A087WSZ9 UBE2FP3-201ENST00000436366 524 ntBASIC1.84□□□□□ -2.11
TRAV30A0A087WSZ9 AL445687.1-201ENST00000439946 251 ntBASIC1.84□□□□□ -2.11
TRAV30A0A087WSZ9 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC1.84□□□□□ -2.11
TRAV30A0A087WSZ9 TRBV26-201ENST00000456572 344 ntBASIC1.84□□□□□ -2.11
TRAV30A0A087WSZ9 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC1.84□□□□□ -2.11
TRAV30A0A087WSZ9 SETP6-201ENST00000479329 568 ntBASIC1.84□□□□□ -2.11
TRAV30A0A087WSZ9 AC026436.1-201ENST00000510537 270 ntBASIC1.84□□□□□ -2.11
TRAV30A0A087WSZ9 SNORA26.10-201ENST00000516427 141 ntBASIC1.84□□□□□ -2.11
TRAV30A0A087WSZ9 RNU4ATAC17P-201ENST00000517272 120 ntBASIC1.84□□□□□ -2.11
TRAV30A0A087WSZ9 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC1.84□□□□□ -2.11
TRAV30A0A087WSZ9 MGST1-215ENST00000540056 546 ntTSL 3 BASIC1.84□□□□□ -2.11
TRAV30A0A087WSZ9 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC1.84□□□□□ -2.11
TRAV30A0A087WSZ9 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC1.84□□□□□ -2.11
TRAV30A0A087WSZ9 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC1.84□□□□□ -2.11
TRAV30A0A087WSZ9 AC061975.8-201ENST00000587058 721 ntBASIC1.84□□□□□ -2.11
TRAV30A0A087WSZ9 OR1M4P-201ENST00000589199 287 ntBASIC1.84□□□□□ -2.11
TRAV30A0A087WSZ9 AL121917.1-203ENST00000605534 577 ntBASIC1.84□□□□□ -2.11
TRAV30A0A087WSZ9 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
TRAV30A0A087WSZ9 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC1.84□□□□□ -2.11
TRAV30A0A087WSZ9 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC1.84□□□□□ -2.11
TRAV30A0A087WSZ9 AP000553.5-201ENST00000641933 54 ntBASIC1.84□□□□□ -2.11
TRAV30A0A087WSZ9 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
TRAV30A0A087WSZ9 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC1.84□□□□□ -2.12
TRAV30A0A087WSZ9 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC1.83□□□□□ -2.12
TRAV30A0A087WSZ9 CENPCP1-201ENST00000533085 2578 ntBASIC1.83□□□□□ -2.12
TRAV30A0A087WSZ9 AC062016.1-201ENST00000355719 319 ntBASIC1.83□□□□□ -2.12
TRAV30A0A087WSZ9 RNA5SP68-201ENST00000363885 119 ntBASIC1.83□□□□□ -2.12
TRAV30A0A087WSZ9 Y_RNA.333-201ENST00000365274 102 ntBASIC1.83□□□□□ -2.12
TRAV30A0A087WSZ9 CRP-202ENST00000368110 667 ntTSL 3 BASIC1.83□□□□□ -2.12
TRAV30A0A087WSZ9 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC1.83□□□□□ -2.12
TRAV30A0A087WSZ9 NUP35P1-201ENST00000422734 947 ntBASIC1.83□□□□□ -2.12
TRAV30A0A087WSZ9 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
TRAV30A0A087WSZ9 AC244033.1-201ENST00000426826 870 ntBASIC1.83□□□□□ -2.12
TRAV30A0A087WSZ9 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC1.83□□□□□ -2.12
TRAV30A0A087WSZ9 MTCYBP34-201ENST00000439552 670 ntBASIC1.83□□□□□ -2.12
TRAV30A0A087WSZ9 AC005002.1-201ENST00000447458 540 ntBASIC1.83□□□□□ -2.12
TRAV30A0A087WSZ9 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC1.83□□□□□ -2.12
TRAV30A0A087WSZ9 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
TRAV30A0A087WSZ9 RNU7-26P-201ENST00000458980 63 ntBASIC1.83□□□□□ -2.12
TRAV30A0A087WSZ9 LINC00888-204ENST00000487386 421 ntBASIC1.83□□□□□ -2.12
TRAV30A0A087WSZ9 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC1.83□□□□□ -2.12
TRAV30A0A087WSZ9 AC008413.1-201ENST00000511864 177 ntBASIC1.83□□□□□ -2.12
TRAV30A0A087WSZ9 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.83□□□□□ -2.12
TRAV30A0A087WSZ9 UBTFL10-201ENST00000528532 562 ntBASIC1.83□□□□□ -2.12
TRAV30A0A087WSZ9 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC1.83□□□□□ -2.12
TRAV30A0A087WSZ9 AC021269.2-201ENST00000532318 330 ntBASIC1.83□□□□□ -2.12
TRAV30A0A087WSZ9 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC1.83□□□□□ -2.12
TRAV30A0A087WSZ9 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC1.83□□□□□ -2.12
TRAV30A0A087WSZ9 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC1.83□□□□□ -2.12
TRAV30A0A087WSZ9 MIR4319-201ENST00000577285 85 ntBASIC1.83□□□□□ -2.12
TRAV30A0A087WSZ9 AC005000.2-201ENST00000605468 310 ntBASIC1.83□□□□□ -2.12
TRAV30A0A087WSZ9 HMGB1P24-202ENST00000615653 685 ntBASIC1.83□□□□□ -2.12
TRAV30A0A087WSZ9 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.83□□□□□ -2.12
TRAV30A0A087WSZ9 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC1.83□□□□□ -2.12
TRAV30A0A087WSZ9 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC1.83□□□□□ -2.12
TRAV30A0A087WSZ9 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC1.83□□□□□ -2.12
TRAV30A0A087WSZ9 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
TRAV30A0A087WSZ9 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.83□□□□□ -2.12
TRAV30A0A087WSZ9 AC090740.1-201ENST00000623193 2262 ntBASIC1.83□□□□□ -2.12
TRAV30A0A087WSZ9 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC1.83□□□□□ -2.12
TRAV30A0A087WSZ9 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC1.83□□□□□ -2.12
TRAV30A0A087WSZ9 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
TRAV30A0A087WSZ9 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
TRAV30A0A087WSZ9 AC004944.1-201ENST00000517807 3059 ntBASIC1.82□□□□□ -2.12
TRAV30A0A087WSZ9 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC1.82□□□□□ -2.12
TRAV30A0A087WSZ9 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
TRAV30A0A087WSZ9 HSPE1P11-201ENST00000339579 310 ntBASIC1.82□□□□□ -2.12
TRAV30A0A087WSZ9 OR56A5-201ENST00000340110 738 ntBASIC1.82□□□□□ -2.12
TRAV30A0A087WSZ9 MIR518C-201ENST00000384822 101 ntBASIC1.82□□□□□ -2.12
TRAV30A0A087WSZ9 RN7SKP140-201ENST00000411196 284 ntBASIC1.82□□□□□ -2.12
TRAV30A0A087WSZ9 RPL7P30-201ENST00000420888 709 ntBASIC1.82□□□□□ -2.12
TRAV30A0A087WSZ9 AC114973.1-201ENST00000429057 632 ntBASIC1.82□□□□□ -2.12
TRAV30A0A087WSZ9 MYL8P-204ENST00000431574 518 ntBASIC1.82□□□□□ -2.12
TRAV30A0A087WSZ9 AL513321.1-201ENST00000441175 761 ntBASIC1.82□□□□□ -2.12
TRAV30A0A087WSZ9 GPM6BP3-201ENST00000442797 145 ntBASIC1.82□□□□□ -2.12
TRAV30A0A087WSZ9 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC1.82□□□□□ -2.12
TRAV30A0A087WSZ9 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC1.82□□□□□ -2.12
TRAV30A0A087WSZ9 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC1.82□□□□□ -2.12
TRAV30A0A087WSZ9 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC1.82□□□□□ -2.12
TRAV30A0A087WSZ9 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC1.82□□□□□ -2.12
TRAV30A0A087WSZ9 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC1.82□□□□□ -2.12
TRAV30A0A087WSZ9 TTC39CP1-201ENST00000512513 755 ntBASIC1.82□□□□□ -2.12
TRAV30A0A087WSZ9 RNA5SP356-201ENST00000515972 94 ntBASIC1.82□□□□□ -2.12
TRAV30A0A087WSZ9 AC109329.2-201ENST00000519658 482 ntBASIC1.82□□□□□ -2.12
TRAV30A0A087WSZ9 TRAV28-201ENST00000557548 323 ntBASIC1.82□□□□□ -2.12
TRAV30A0A087WSZ9 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC1.82□□□□□ -2.12
TRAV30A0A087WSZ9 HMGB1P6-201ENST00000569046 646 ntBASIC1.82□□□□□ -2.12
TRAV30A0A087WSZ9 MIR5007-201ENST00000583098 95 ntBASIC1.82□□□□□ -2.12
TRAV30A0A087WSZ9 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC1.82□□□□□ -2.12
TRAV30A0A087WSZ9 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC1.82□□□□□ -2.12
TRAV30A0A087WSZ9 AC012213.4-201ENST00000606457 354 ntBASIC1.82□□□□□ -2.12
TRAV30A0A087WSZ9 MIR6817-201ENST00000615588 66 ntBASIC1.82□□□□□ -2.12
TRAV30A0A087WSZ9 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC1.82□□□□□ -2.12
TRAV30A0A087WSZ9 AC006386.2-201ENST00000624491 75 ntBASIC1.82□□□□□ -2.12
TRAV30A0A087WSZ9 AC012005.1-201ENST00000624575 75 ntBASIC1.82□□□□□ -2.12
TRAV30A0A087WSZ9 MTND4P35-201ENST00000604257 1375 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms