Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
PCDHB13Q9Y5F0 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
PCDHB13Q9Y5F0 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC7.11□□□□□ -1.27
PCDHB13Q9Y5F0 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
PCDHB13Q9Y5F0 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
PCDHB13Q9Y5F0 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC7.11□□□□□ -1.27
PCDHB13Q9Y5F0 RNU6-20P-201ENST00000384106 107 ntBASIC7.11□□□□□ -1.27
PCDHB13Q9Y5F0 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC7.11□□□□□ -1.27
PCDHB13Q9Y5F0 AL358472.1-201ENST00000431295 329 ntBASIC7.11□□□□□ -1.27
PCDHB13Q9Y5F0 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC7.11□□□□□ -1.27
PCDHB13Q9Y5F0 EEF1A1P1-201ENST00000447052 739 ntBASIC7.11□□□□□ -1.27
PCDHB13Q9Y5F0 AP006222.1-205ENST00000450734 457 ntBASIC7.11□□□□□ -1.27
PCDHB13Q9Y5F0 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC7.11□□□□□ -1.27
PCDHB13Q9Y5F0 RPL23AP45-201ENST00000476406 468 ntBASIC7.11□□□□□ -1.27
PCDHB13Q9Y5F0 PPIAP19-201ENST00000486414 492 ntBASIC7.11□□□□□ -1.27
PCDHB13Q9Y5F0 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC7.11□□□□□ -1.27
PCDHB13Q9Y5F0 AC018645.1-201ENST00000505003 109 ntBASIC7.11□□□□□ -1.27
PCDHB13Q9Y5F0 RN7SKP179-201ENST00000516126 217 ntBASIC7.11□□□□□ -1.27
PCDHB13Q9Y5F0 RNU6-567P-201ENST00000516746 107 ntBASIC7.11□□□□□ -1.27
PCDHB13Q9Y5F0 IGKV1D-22-201ENST00000518953 324 ntBASIC7.11□□□□□ -1.27
PCDHB13Q9Y5F0 IGHV1-14-201ENST00000523391 241 ntBASIC7.11□□□□□ -1.27
PCDHB13Q9Y5F0 AC023575.1-201ENST00000580510 358 ntBASIC7.11□□□□□ -1.27
PCDHB13Q9Y5F0 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC7.11□□□□□ -1.27
PCDHB13Q9Y5F0 MIR212-201ENST00000586026 110 ntBASIC7.11□□□□□ -1.27
PCDHB13Q9Y5F0 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
PCDHB13Q9Y5F0 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
PCDHB13Q9Y5F0 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
PCDHB13Q9Y5F0 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
PCDHB13Q9Y5F0 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC7.11□□□□□ -1.27
PCDHB13Q9Y5F0 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
PCDHB13Q9Y5F0 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
PCDHB13Q9Y5F0 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
PCDHB13Q9Y5F0 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
PCDHB13Q9Y5F0 GDA-209ENST00000545168 5362 ntTSL 2 BASIC7.11□□□□□ -1.27
PCDHB13Q9Y5F0 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
PCDHB13Q9Y5F0 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
PCDHB13Q9Y5F0 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC7.11□□□□□ -1.27
PCDHB13Q9Y5F0 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
PCDHB13Q9Y5F0 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
PCDHB13Q9Y5F0 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
PCDHB13Q9Y5F0 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
PCDHB13Q9Y5F0 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
PCDHB13Q9Y5F0 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC7.1□□□□□ -1.27
PCDHB13Q9Y5F0 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
PCDHB13Q9Y5F0 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC7.1□□□□□ -1.27
PCDHB13Q9Y5F0 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC7.1□□□□□ -1.27
PCDHB13Q9Y5F0 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC7.1□□□□□ -1.27
PCDHB13Q9Y5F0 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
PCDHB13Q9Y5F0 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
PCDHB13Q9Y5F0 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
PCDHB13Q9Y5F0 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC7.1□□□□□ -1.27
PCDHB13Q9Y5F0 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC7.1□□□□□ -1.27
PCDHB13Q9Y5F0 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
PCDHB13Q9Y5F0 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
PCDHB13Q9Y5F0 Y_RNA.230-201ENST00000364348 109 ntBASIC7.1□□□□□ -1.27
PCDHB13Q9Y5F0 RNU6-17P-201ENST00000384245 107 ntBASIC7.1□□□□□ -1.27
PCDHB13Q9Y5F0 RNU6-18P-201ENST00000384527 107 ntBASIC7.1□□□□□ -1.27
PCDHB13Q9Y5F0 RNU6-821P-201ENST00000390995 107 ntBASIC7.1□□□□□ -1.27
PCDHB13Q9Y5F0 AL133388.1-201ENST00000404509 287 ntBASIC7.1□□□□□ -1.27
PCDHB13Q9Y5F0 OR3A2-201ENST00000408891 1076 ntBASIC7.1□□□□□ -1.27
PCDHB13Q9Y5F0 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC7.1□□□□□ -1.27
PCDHB13Q9Y5F0 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC7.1□□□□□ -1.27
PCDHB13Q9Y5F0 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
PCDHB13Q9Y5F0 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC7.1□□□□□ -1.27
PCDHB13Q9Y5F0 AL356121.1-201ENST00000442911 156 ntBASIC7.1□□□□□ -1.27
PCDHB13Q9Y5F0 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC7.1□□□□□ -1.27
PCDHB13Q9Y5F0 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC7.1□□□□□ -1.27
PCDHB13Q9Y5F0 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC7.1□□□□□ -1.27
PCDHB13Q9Y5F0 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC7.1□□□□□ -1.27
PCDHB13Q9Y5F0 AC091193.1-201ENST00000604640 448 ntBASIC7.1□□□□□ -1.27
PCDHB13Q9Y5F0 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
PCDHB13Q9Y5F0 OLMALINC-203ENST00000641087 3779 ntBASIC7.1□□□□□ -1.27
PCDHB13Q9Y5F0 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
PCDHB13Q9Y5F0 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC7.1□□□□□ -1.27
PCDHB13Q9Y5F0 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
PCDHB13Q9Y5F0 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
PCDHB13Q9Y5F0 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC7.1□□□□□ -1.27
PCDHB13Q9Y5F0 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC7.1□□□□□ -1.27
PCDHB13Q9Y5F0 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
PCDHB13Q9Y5F0 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC7.1□□□□□ -1.27
PCDHB13Q9Y5F0 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC7.1□□□□□ -1.27
PCDHB13Q9Y5F0 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
PCDHB13Q9Y5F0 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC7.1□□□□□ -1.27
PCDHB13Q9Y5F0 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC7.09□□□□□ -1.27
PCDHB13Q9Y5F0 AC010329.2-201ENST00000595195 2737 ntBASIC7.09□□□□□ -1.27
PCDHB13Q9Y5F0 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC7.09□□□□□ -1.27
PCDHB13Q9Y5F0 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
PCDHB13Q9Y5F0 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC7.09□□□□□ -1.27
PCDHB13Q9Y5F0 SRRM1P3-201ENST00000426911 2678 ntBASIC7.09□□□□□ -1.27
PCDHB13Q9Y5F0 AP001284.1-201ENST00000528393 2118 ntBASIC7.09□□□□□ -1.27
PCDHB13Q9Y5F0 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
PCDHB13Q9Y5F0 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
PCDHB13Q9Y5F0 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
PCDHB13Q9Y5F0 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
PCDHB13Q9Y5F0 SNORD35A-201ENST00000363389 86 ntBASIC7.09□□□□□ -1.27
PCDHB13Q9Y5F0 RNU6-395P-201ENST00000365662 106 ntBASIC7.09□□□□□ -1.27
PCDHB13Q9Y5F0 MIR135A2-201ENST00000384854 100 ntBASIC7.09□□□□□ -1.27
PCDHB13Q9Y5F0 MIR301A-201ENST00000385261 86 ntBASIC7.09□□□□□ -1.27
PCDHB13Q9Y5F0 ENSAP1-201ENST00000392855 326 ntBASIC7.09□□□□□ -1.27
PCDHB13Q9Y5F0 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms