Protein–RNA interactions for Protein: Q9Y3E7

CHMP3, Charged multivesicular body protein 3, humanhuman

Predictions only

Length 222 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3Q9Y3E7 AC017037.1-201ENST00000508460 471 ntBASIC6.14□□□□□ -1.43
CHMP3Q9Y3E7 SNORA70.11-201ENST00000515987 138 ntBASIC6.14□□□□□ -1.43
CHMP3Q9Y3E7 SNORA70.13-201ENST00000516116 138 ntBASIC6.14□□□□□ -1.43
CHMP3Q9Y3E7 AP001880.2-201ENST00000538233 448 ntBASIC6.14□□□□□ -1.43
CHMP3Q9Y3E7 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC6.14□□□□□ -1.43
CHMP3Q9Y3E7 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CHMP3Q9Y3E7 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC6.14□□□□□ -1.43
CHMP3Q9Y3E7 MIR4790-201ENST00000577799 79 ntBASIC6.14□□□□□ -1.43
CHMP3Q9Y3E7 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC6.14□□□□□ -1.43
CHMP3Q9Y3E7 AC007546.1-201ENST00000619452 559 ntBASIC6.14□□□□□ -1.43
CHMP3Q9Y3E7 AC244100.1-202ENST00000621554 382 ntBASIC6.14□□□□□ -1.43
CHMP3Q9Y3E7 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC6.14□□□□□ -1.43
CHMP3Q9Y3E7 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CHMP3Q9Y3E7 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CHMP3Q9Y3E7 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
CHMP3Q9Y3E7 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC6.14□□□□□ -1.43
CHMP3Q9Y3E7 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
CHMP3Q9Y3E7 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
CHMP3Q9Y3E7 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC6.14□□□□□ -1.43
CHMP3Q9Y3E7 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
CHMP3Q9Y3E7 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CHMP3Q9Y3E7 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CHMP3Q9Y3E7 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CHMP3Q9Y3E7 SDAD1P1-202ENST00000524156 2051 ntBASIC6.13□□□□□ -1.43
CHMP3Q9Y3E7 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CHMP3Q9Y3E7 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC6.13□□□□□ -1.43
CHMP3Q9Y3E7 RNU6-1188P-201ENST00000363795 107 ntBASIC6.13□□□□□ -1.43
CHMP3Q9Y3E7 Y_RNA.193-201ENST00000363979 102 ntBASIC6.13□□□□□ -1.43
CHMP3Q9Y3E7 U3.11-201ENST00000364476 212 ntBASIC6.13□□□□□ -1.43
CHMP3Q9Y3E7 PARD3-204ENST00000374768 799 ntTSL 3 BASIC6.13□□□□□ -1.43
CHMP3Q9Y3E7 AL357515.1-201ENST00000402967 542 ntBASIC6.13□□□□□ -1.43
CHMP3Q9Y3E7 RNU2-29P-201ENST00000410423 189 ntBASIC6.13□□□□□ -1.43
CHMP3Q9Y3E7 AC074085.1-201ENST00000413598 418 ntBASIC6.13□□□□□ -1.43
CHMP3Q9Y3E7 OR6C66P-201ENST00000414917 930 ntBASIC6.13□□□□□ -1.43
CHMP3Q9Y3E7 MTCYBP9-201ENST00000431021 303 ntBASIC6.13□□□□□ -1.43
CHMP3Q9Y3E7 AL160004.2-201ENST00000432935 350 ntBASIC6.13□□□□□ -1.43
CHMP3Q9Y3E7 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC6.13□□□□□ -1.43
CHMP3Q9Y3E7 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC6.13□□□□□ -1.43
CHMP3Q9Y3E7 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC6.13□□□□□ -1.43
CHMP3Q9Y3E7 RPL30P15-201ENST00000457129 321 ntBASIC6.13□□□□□ -1.43
CHMP3Q9Y3E7 MIR2053-201ENST00000459295 91 ntBASIC6.13□□□□□ -1.43
CHMP3Q9Y3E7 RNU6-566P-201ENST00000516790 107 ntBASIC6.13□□□□□ -1.43
CHMP3Q9Y3E7 RNA5SP503-201ENST00000517047 117 ntBASIC6.13□□□□□ -1.43
CHMP3Q9Y3E7 AC100784.1-201ENST00000522790 310 ntBASIC6.13□□□□□ -1.43
CHMP3Q9Y3E7 AC091042.1-201ENST00000579213 173 ntBASIC6.13□□□□□ -1.43
CHMP3Q9Y3E7 MIR4660-201ENST00000583549 74 ntBASIC6.13□□□□□ -1.43
CHMP3Q9Y3E7 CYP2C61P-201ENST00000604072 290 ntBASIC6.13□□□□□ -1.43
CHMP3Q9Y3E7 AL592436.1-201ENST00000605135 558 ntBASIC6.13□□□□□ -1.43
CHMP3Q9Y3E7 AL161616.1-201ENST00000611867 286 ntBASIC6.13□□□□□ -1.43
CHMP3Q9Y3E7 uc_338.34-201ENST00000617467 174 ntBASIC6.13□□□□□ -1.43
CHMP3Q9Y3E7 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC6.13□□□□□ -1.43
CHMP3Q9Y3E7 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
CHMP3Q9Y3E7 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CHMP3Q9Y3E7 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CHMP3Q9Y3E7 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
CHMP3Q9Y3E7 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
CHMP3Q9Y3E7 AC015813.6-201ENST00000624409 5808 ntBASIC6.12□□□□□ -1.43
CHMP3Q9Y3E7 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CHMP3Q9Y3E7 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CHMP3Q9Y3E7 SNORA73.1-201ENST00000363107 205 ntBASIC6.12□□□□□ -1.43
CHMP3Q9Y3E7 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CHMP3Q9Y3E7 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC6.12□□□□□ -1.43
CHMP3Q9Y3E7 Y_RNA.452-201ENST00000384202 108 ntBASIC6.12□□□□□ -1.43
CHMP3Q9Y3E7 RNA5SP113-201ENST00000410486 84 ntBASIC6.12□□□□□ -1.43
CHMP3Q9Y3E7 RN7SKP58-201ENST00000411010 305 ntBASIC6.12□□□□□ -1.43
CHMP3Q9Y3E7 RPL6P29-201ENST00000414863 865 ntBASIC6.12□□□□□ -1.43
CHMP3Q9Y3E7 COX6CP15-201ENST00000426313 211 ntBASIC6.12□□□□□ -1.43
CHMP3Q9Y3E7 UBE2V1P13-201ENST00000436983 439 ntBASIC6.12□□□□□ -1.43
CHMP3Q9Y3E7 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC6.12□□□□□ -1.43
CHMP3Q9Y3E7 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC6.12□□□□□ -1.43
CHMP3Q9Y3E7 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CHMP3Q9Y3E7 MTCYBP40-201ENST00000509390 1135 ntBASIC6.12□□□□□ -1.43
CHMP3Q9Y3E7 RNA5SP230-201ENST00000517039 122 ntBASIC6.12□□□□□ -1.43
CHMP3Q9Y3E7 RN7SKP295-201ENST00000517264 153 ntBASIC6.12□□□□□ -1.43
CHMP3Q9Y3E7 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC6.12□□□□□ -1.43
CHMP3Q9Y3E7 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC6.12□□□□□ -1.43
CHMP3Q9Y3E7 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC6.12□□□□□ -1.43
CHMP3Q9Y3E7 AP000763.2-201ENST00000540641 163 ntBASIC6.12□□□□□ -1.43
CHMP3Q9Y3E7 BNIP3P1-201ENST00000547295 580 ntBASIC6.12□□□□□ -1.43
CHMP3Q9Y3E7 LSM3P2-201ENST00000551246 273 ntBASIC6.12□□□□□ -1.43
CHMP3Q9Y3E7 SETP2-201ENST00000553886 926 ntBASIC6.12□□□□□ -1.43
CHMP3Q9Y3E7 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC6.12□□□□□ -1.43
CHMP3Q9Y3E7 A2MP1-204ENST00000566278 4130 ntBASIC6.12□□□□□ -1.43
CHMP3Q9Y3E7 MIR4680-201ENST00000580906 66 ntBASIC6.12□□□□□ -1.43
CHMP3Q9Y3E7 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC6.12□□□□□ -1.43
CHMP3Q9Y3E7 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC6.12□□□□□ -1.43
CHMP3Q9Y3E7 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC6.12□□□□□ -1.43
CHMP3Q9Y3E7 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC6.12□□□□□ -1.43
CHMP3Q9Y3E7 AC092376.2-201ENST00000622621 4116 ntBASIC6.12□□□□□ -1.43
CHMP3Q9Y3E7 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC6.12□□□□□ -1.43
CHMP3Q9Y3E7 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
CHMP3Q9Y3E7 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CHMP3Q9Y3E7 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
CHMP3Q9Y3E7 AL442639.1-201ENST00000625030 1899 ntBASIC6.11□□□□□ -1.43
CHMP3Q9Y3E7 MTND5P19-201ENST00000424872 1794 ntBASIC6.11□□□□□ -1.43
CHMP3Q9Y3E7 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
CHMP3Q9Y3E7 CD36-221ENST00000534394 1741 ntTSL 2 BASIC6.11□□□□□ -1.43
CHMP3Q9Y3E7 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CHMP3Q9Y3E7 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
CHMP3Q9Y3E7 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms