Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 MTCO3P16-201ENST00000454456 754 ntBASIC4.05□□□□□ -1.76
DDX4Q9NQI0 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC4.05□□□□□ -1.76
DDX4Q9NQI0 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.05□□□□□ -1.76
DDX4Q9NQI0 RPL31P3-201ENST00000458430 332 ntBASIC4.05□□□□□ -1.76
DDX4Q9NQI0 AC146507.1-201ENST00000468335 354 ntBASIC4.05□□□□□ -1.76
DDX4Q9NQI0 HSPE1P23-201ENST00000509838 286 ntBASIC4.05□□□□□ -1.76
DDX4Q9NQI0 FCF1P8-201ENST00000510322 597 ntBASIC4.05□□□□□ -1.76
DDX4Q9NQI0 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC4.05□□□□□ -1.76
DDX4Q9NQI0 AC023141.12-201ENST00000512399 199 ntBASIC4.05□□□□□ -1.76
DDX4Q9NQI0 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.05□□□□□ -1.76
DDX4Q9NQI0 OR5AP1P-201ENST00000529730 940 ntBASIC4.05□□□□□ -1.76
DDX4Q9NQI0 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
DDX4Q9NQI0 AC135279.1-201ENST00000543493 504 ntBASIC4.05□□□□□ -1.76
DDX4Q9NQI0 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC4.05□□□□□ -1.76
DDX4Q9NQI0 AC106782.4-201ENST00000568264 210 ntBASIC4.05□□□□□ -1.76
DDX4Q9NQI0 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC4.05□□□□□ -1.76
DDX4Q9NQI0 MIR5680-201ENST00000577577 84 ntBASIC4.05□□□□□ -1.76
DDX4Q9NQI0 MIR4276-201ENST00000584832 70 ntBASIC4.05□□□□□ -1.76
DDX4Q9NQI0 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC4.05□□□□□ -1.76
DDX4Q9NQI0 NBR2-204ENST00000587322 63 ntBASIC4.05□□□□□ -1.76
DDX4Q9NQI0 AC007687.1-201ENST00000602704 304 ntBASIC4.05□□□□□ -1.76
DDX4Q9NQI0 AC007566.2-201ENST00000603642 413 ntBASIC4.05□□□□□ -1.76
DDX4Q9NQI0 BNIP3P11-201ENST00000603878 563 ntBASIC4.05□□□□□ -1.76
DDX4Q9NQI0 AC079228.1-201ENST00000624774 1049 ntBASIC4.05□□□□□ -1.76
DDX4Q9NQI0 PCMTD1P7-201ENST00000634506 357 ntBASIC4.05□□□□□ -1.76
DDX4Q9NQI0 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
DDX4Q9NQI0 ELL2P3-201ENST00000457883 1602 ntBASIC4.05□□□□□ -1.76
DDX4Q9NQI0 AC066616.2-201ENST00000559334 1481 ntBASIC4.05□□□□□ -1.76
DDX4Q9NQI0 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
DDX4Q9NQI0 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.04□□□□□ -1.76
DDX4Q9NQI0 AC130650.2-201ENST00000618736 2403 ntBASIC4.04□□□□□ -1.76
DDX4Q9NQI0 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
DDX4Q9NQI0 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
DDX4Q9NQI0 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
DDX4Q9NQI0 RPL21P132-201ENST00000331267 462 ntBASIC4.04□□□□□ -1.76
DDX4Q9NQI0 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
DDX4Q9NQI0 SNORD116-9-201ENST00000384000 95 ntBASIC4.04□□□□□ -1.76
DDX4Q9NQI0 SNORD116-3-201ENST00000384287 95 ntBASIC4.04□□□□□ -1.76
DDX4Q9NQI0 SNORD116-7-201ENST00000384404 95 ntBASIC4.04□□□□□ -1.76
DDX4Q9NQI0 SNORD116-5-201ENST00000384462 95 ntBASIC4.04□□□□□ -1.76
DDX4Q9NQI0 AL357075.1-201ENST00000404107 726 ntBASIC4.04□□□□□ -1.76
DDX4Q9NQI0 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC4.04□□□□□ -1.76
DDX4Q9NQI0 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC4.04□□□□□ -1.76
DDX4Q9NQI0 AL049610.1-201ENST00000423374 372 ntBASIC4.04□□□□□ -1.76
DDX4Q9NQI0 OR51AB1P-201ENST00000429046 620 ntBASIC4.04□□□□□ -1.76
DDX4Q9NQI0 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC4.04□□□□□ -1.76
DDX4Q9NQI0 RPL23AP74-201ENST00000437246 471 ntBASIC4.04□□□□□ -1.76
DDX4Q9NQI0 AF228730.2-201ENST00000438784 848 ntBASIC4.04□□□□□ -1.76
DDX4Q9NQI0 AC127537.2-201ENST00000439258 465 ntBASIC4.04□□□□□ -1.76
DDX4Q9NQI0 MTND2P4-201ENST00000445034 1004 ntBASIC4.04□□□□□ -1.76
DDX4Q9NQI0 RPL29P29-201ENST00000448725 423 ntBASIC4.04□□□□□ -1.76
DDX4Q9NQI0 ARPC3P5-201ENST00000448802 534 ntBASIC4.04□□□□□ -1.76
DDX4Q9NQI0 AC026410.2-201ENST00000460281 156 ntBASIC4.04□□□□□ -1.76
DDX4Q9NQI0 AC092754.2-201ENST00000463506 460 ntBASIC4.04□□□□□ -1.76
DDX4Q9NQI0 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC4.04□□□□□ -1.76
DDX4Q9NQI0 AC072039.1-201ENST00000477611 581 ntBASIC4.04□□□□□ -1.76
DDX4Q9NQI0 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC4.04□□□□□ -1.76
DDX4Q9NQI0 AC112198.1-201ENST00000505369 1220 ntBASIC4.04□□□□□ -1.76
DDX4Q9NQI0 AC005798.1-201ENST00000513715 387 ntBASIC4.04□□□□□ -1.76
DDX4Q9NQI0 RN7SKP277-201ENST00000516895 283 ntBASIC4.04□□□□□ -1.76
DDX4Q9NQI0 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC4.04□□□□□ -1.76
DDX4Q9NQI0 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC4.04□□□□□ -1.76
DDX4Q9NQI0 AKIRIN1P1-201ENST00000547384 544 ntBASIC4.04□□□□□ -1.76
DDX4Q9NQI0 AC009101.1-201ENST00000568135 242 ntBASIC4.04□□□□□ -1.76
DDX4Q9NQI0 AC006270.2-201ENST00000578523 652 ntBASIC4.04□□□□□ -1.76
DDX4Q9NQI0 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC4.04□□□□□ -1.76
DDX4Q9NQI0 CKS1BP3-201ENST00000600888 237 ntBASIC4.04□□□□□ -1.76
DDX4Q9NQI0 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC4.04□□□□□ -1.76
DDX4Q9NQI0 AC080013.4-201ENST00000607624 649 ntBASIC4.04□□□□□ -1.76
DDX4Q9NQI0 AL513477.2-201ENST00000607858 568 ntBASIC4.04□□□□□ -1.76
DDX4Q9NQI0 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.04□□□□□ -1.76
DDX4Q9NQI0 MIR486-1-201ENST00000612171 68 ntBASIC4.04□□□□□ -1.76
DDX4Q9NQI0 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
DDX4Q9NQI0 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
DDX4Q9NQI0 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.04□□□□□ -1.76
DDX4Q9NQI0 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC4.04□□□□□ -1.76
DDX4Q9NQI0 NCAPGP1-201ENST00000505112 1814 ntBASIC4.04□□□□□ -1.76
DDX4Q9NQI0 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC4.04□□□□□ -1.76
DDX4Q9NQI0 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
DDX4Q9NQI0 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.04□□□□□ -1.76
DDX4Q9NQI0 AC068647.1-201ENST00000489539 2265 ntBASIC4.04□□□□□ -1.76
DDX4Q9NQI0 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
DDX4Q9NQI0 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
DDX4Q9NQI0 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.03□□□□□ -1.76
DDX4Q9NQI0 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.03□□□□□ -1.76
DDX4Q9NQI0 GDI2P1-201ENST00000429312 1336 ntBASIC4.03□□□□□ -1.76
DDX4Q9NQI0 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
DDX4Q9NQI0 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.03□□□□□ -1.76
DDX4Q9NQI0 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.03□□□□□ -1.76
DDX4Q9NQI0 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
DDX4Q9NQI0 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
DDX4Q9NQI0 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
DDX4Q9NQI0 RNU6-462P-201ENST00000362659 105 ntBASIC4.03□□□□□ -1.76
DDX4Q9NQI0 RNU1-18P-201ENST00000363062 164 ntBASIC4.03□□□□□ -1.76
DDX4Q9NQI0 Y_RNA.302-201ENST00000364997 102 ntBASIC4.03□□□□□ -1.76
DDX4Q9NQI0 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
DDX4Q9NQI0 HMGN1P24-201ENST00000412282 298 ntBASIC4.03□□□□□ -1.76
DDX4Q9NQI0 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC4.03□□□□□ -1.76
DDX4Q9NQI0 AC083875.1-201ENST00000419509 405 ntBASIC4.03□□□□□ -1.76
DDX4Q9NQI0 SEPT2P1-201ENST00000419651 180 ntBASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 147.7 ms