Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
RNF41Q9H4P4 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.39□□□□□ -1.87
RNF41Q9H4P4 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.39□□□□□ -1.87
RNF41Q9H4P4 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.39□□□□□ -1.87
RNF41Q9H4P4 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.39□□□□□ -1.87
RNF41Q9H4P4 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.39□□□□□ -1.87
RNF41Q9H4P4 AC022509.4-201ENST00000621404 572 ntBASIC3.39□□□□□ -1.87
RNF41Q9H4P4 AL590240.3-201ENST00000621416 943 ntBASIC3.39□□□□□ -1.87
RNF41Q9H4P4 AC073348.1-201ENST00000623002 331 ntBASIC3.39□□□□□ -1.87
RNF41Q9H4P4 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3.39□□□□□ -1.87
RNF41Q9H4P4 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.39□□□□□ -1.87
RNF41Q9H4P4 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC3.39□□□□□ -1.87
RNF41Q9H4P4 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
RNF41Q9H4P4 AL672296.1-201ENST00000427780 2158 ntBASIC3.39□□□□□ -1.87
RNF41Q9H4P4 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
RNF41Q9H4P4 AC009487.2-201ENST00000420969 6821 ntBASIC3.39□□□□□ -1.87
RNF41Q9H4P4 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
RNF41Q9H4P4 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.38□□□□□ -1.87
RNF41Q9H4P4 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
RNF41Q9H4P4 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
RNF41Q9H4P4 RNU6-492P-201ENST00000363035 104 ntBASIC3.38□□□□□ -1.87
RNF41Q9H4P4 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
RNF41Q9H4P4 MIR512-1-201ENST00000384913 84 ntBASIC3.38□□□□□ -1.87
RNF41Q9H4P4 RPL5P18-201ENST00000406671 891 ntBASIC3.38□□□□□ -1.87
RNF41Q9H4P4 MTND2P16-201ENST00000419987 799 ntBASIC3.38□□□□□ -1.87
RNF41Q9H4P4 AC007435.1-201ENST00000421086 415 ntBASIC3.38□□□□□ -1.87
RNF41Q9H4P4 AL645937.1-202ENST00000421799 937 ntBASIC3.38□□□□□ -1.87
RNF41Q9H4P4 AC012498.1-201ENST00000424037 437 ntBASIC3.38□□□□□ -1.87
RNF41Q9H4P4 MTND2P5-201ENST00000432656 1006 ntBASIC3.38□□□□□ -1.87
RNF41Q9H4P4 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.38□□□□□ -1.87
RNF41Q9H4P4 AC107083.1-201ENST00000439643 279 ntBASIC3.38□□□□□ -1.87
RNF41Q9H4P4 AC104073.1-201ENST00000451988 151 ntBASIC3.38□□□□□ -1.87
RNF41Q9H4P4 PTGES3P5-201ENST00000455109 434 ntBASIC3.38□□□□□ -1.87
RNF41Q9H4P4 AP002884.2-201ENST00000471647 395 ntBASIC3.38□□□□□ -1.87
RNF41Q9H4P4 AC078817.1-201ENST00000492623 435 ntBASIC3.38□□□□□ -1.87
RNF41Q9H4P4 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC3.38□□□□□ -1.87
RNF41Q9H4P4 BOLA3P3-201ENST00000505182 232 ntBASIC3.38□□□□□ -1.87
RNF41Q9H4P4 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.38□□□□□ -1.87
RNF41Q9H4P4 AC117522.3-201ENST00000507974 584 ntBASIC3.38□□□□□ -1.87
RNF41Q9H4P4 MTCYBP16-201ENST00000509187 1129 ntBASIC3.38□□□□□ -1.87
RNF41Q9H4P4 AC010265.1-201ENST00000513509 211 ntBASIC3.38□□□□□ -1.87
RNF41Q9H4P4 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.38□□□□□ -1.87
RNF41Q9H4P4 ARL2BPP5-201ENST00000523141 481 ntBASIC3.38□□□□□ -1.87
RNF41Q9H4P4 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC3.38□□□□□ -1.87
RNF41Q9H4P4 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC3.38□□□□□ -1.87
RNF41Q9H4P4 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.38□□□□□ -1.87
RNF41Q9H4P4 IGHV3-29-201ENST00000604817 344 ntBASIC3.38□□□□□ -1.87
RNF41Q9H4P4 AC069545.1-201ENST00000605671 358 ntBASIC3.38□□□□□ -1.87
RNF41Q9H4P4 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.38□□□□□ -1.87
RNF41Q9H4P4 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC3.38□□□□□ -1.87
RNF41Q9H4P4 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.38□□□□□ -1.87
RNF41Q9H4P4 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.37□□□□□ -1.87
RNF41Q9H4P4 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
RNF41Q9H4P4 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
RNF41Q9H4P4 TMSB4XP8-201ENST00000402089 135 ntBASIC3.37□□□□□ -1.87
RNF41Q9H4P4 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.37□□□□□ -1.87
RNF41Q9H4P4 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
RNF41Q9H4P4 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC3.37□□□□□ -1.87
RNF41Q9H4P4 TMSB4XP6-201ENST00000415187 135 ntBASIC3.37□□□□□ -1.87
RNF41Q9H4P4 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC3.37□□□□□ -1.87
RNF41Q9H4P4 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.37□□□□□ -1.87
RNF41Q9H4P4 ZDHHC20P2-201ENST00000424108 429 ntBASIC3.37□□□□□ -1.87
RNF41Q9H4P4 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC3.37□□□□□ -1.87
RNF41Q9H4P4 TMSB4XP1-201ENST00000424567 135 ntBASIC3.37□□□□□ -1.87
RNF41Q9H4P4 DUTP6-201ENST00000425573 462 ntBASIC3.37□□□□□ -1.87
RNF41Q9H4P4 DPRXP1-201ENST00000426312 460 ntBASIC3.37□□□□□ -1.87
RNF41Q9H4P4 USP9YP24-201ENST00000434374 697 ntBASIC3.37□□□□□ -1.87
RNF41Q9H4P4 USP9YP22-201ENST00000438971 294 ntBASIC3.37□□□□□ -1.87
RNF41Q9H4P4 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.37□□□□□ -1.87
RNF41Q9H4P4 USP9YP17-201ENST00000444617 696 ntBASIC3.37□□□□□ -1.87
RNF41Q9H4P4 RFC5P1-201ENST00000454419 874 ntBASIC3.37□□□□□ -1.87
RNF41Q9H4P4 RPL21P41-201ENST00000459863 264 ntBASIC3.37□□□□□ -1.87
RNF41Q9H4P4 AC010460.2-201ENST00000509054 677 ntBASIC3.37□□□□□ -1.87
RNF41Q9H4P4 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
RNF41Q9H4P4 RNU4-60P-201ENST00000517239 135 ntBASIC3.37□□□□□ -1.87
RNF41Q9H4P4 AC087808.1-201ENST00000520501 361 ntBASIC3.37□□□□□ -1.87
RNF41Q9H4P4 CA1-215ENST00000522389 551 ntTSL 3 BASIC3.37□□□□□ -1.87
RNF41Q9H4P4 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC3.37□□□□□ -1.87
RNF41Q9H4P4 OR8L1P-201ENST00000534005 955 ntBASIC3.37□□□□□ -1.87
RNF41Q9H4P4 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
RNF41Q9H4P4 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.37□□□□□ -1.87
RNF41Q9H4P4 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC3.37□□□□□ -1.87
RNF41Q9H4P4 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.37□□□□□ -1.87
RNF41Q9H4P4 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
RNF41Q9H4P4 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
RNF41Q9H4P4 AC091946.2-201ENST00000606105 291 ntBASIC3.37□□□□□ -1.87
RNF41Q9H4P4 AC016877.3-201ENST00000606778 504 ntBASIC3.37□□□□□ -1.87
RNF41Q9H4P4 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC3.37□□□□□ -1.87
RNF41Q9H4P4 AC090115.4-201ENST00000609970 188 ntBASIC3.37□□□□□ -1.87
RNF41Q9H4P4 UGP2-231ENST00000627474 264 ntTSL 5 BASIC3.37□□□□□ -1.87
RNF41Q9H4P4 GMFB-210ENST00000628554 639 ntTSL 4 BASIC3.37□□□□□ -1.87
RNF41Q9H4P4 SNORA50A-202ENST00000629536 136 ntBASIC3.37□□□□□ -1.87
RNF41Q9H4P4 AL137790.1-201ENST00000634283 177 ntBASIC3.37□□□□□ -1.87
RNF41Q9H4P4 MIR4496-201ENST00000635896 61 ntBASIC3.37□□□□□ -1.87
RNF41Q9H4P4 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.37□□□□□ -1.87
RNF41Q9H4P4 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
RNF41Q9H4P4 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
RNF41Q9H4P4 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
RNF41Q9H4P4 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
RNF41Q9H4P4 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms