Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 AL603825.1-201ENST00000438481 80 ntBASIC2.68□□□□□ -1.98
TRIM4Q9C037 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.68□□□□□ -1.98
TRIM4Q9C037 AC234775.1-201ENST00000454247 670 ntBASIC2.68□□□□□ -1.98
TRIM4Q9C037 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.68□□□□□ -1.98
TRIM4Q9C037 NFU1-207ENST00000462320 558 ntTSL 4 BASIC2.68□□□□□ -1.98
TRIM4Q9C037 AC128713.1-201ENST00000471495 306 ntBASIC2.68□□□□□ -1.98
TRIM4Q9C037 AC104689.1-201ENST00000473356 768 ntBASIC2.68□□□□□ -1.98
TRIM4Q9C037 AC126121.1-201ENST00000482313 553 ntBASIC2.68□□□□□ -1.98
TRIM4Q9C037 RPS27P27-201ENST00000498779 255 ntBASIC2.68□□□□□ -1.98
TRIM4Q9C037 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
TRIM4Q9C037 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC2.68□□□□□ -1.98
TRIM4Q9C037 SNORA31.1-201ENST00000515993 133 ntBASIC2.68□□□□□ -1.98
TRIM4Q9C037 SNORA31.5-201ENST00000516190 133 ntBASIC2.68□□□□□ -1.98
TRIM4Q9C037 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC2.68□□□□□ -1.98
TRIM4Q9C037 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.68□□□□□ -1.98
TRIM4Q9C037 OR4V1P-201ENST00000525394 1140 ntBASIC2.68□□□□□ -1.98
TRIM4Q9C037 AC019227.1-201ENST00000526902 510 ntBASIC2.68□□□□□ -1.98
TRIM4Q9C037 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
TRIM4Q9C037 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC2.68□□□□□ -1.98
TRIM4Q9C037 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.68□□□□□ -1.98
TRIM4Q9C037 AL512310.1-201ENST00000548639 172 ntBASIC2.68□□□□□ -1.98
TRIM4Q9C037 POLR2KP1-201ENST00000553226 168 ntBASIC2.68□□□□□ -1.98
TRIM4Q9C037 AL355836.1-201ENST00000555951 870 ntBASIC2.68□□□□□ -1.98
TRIM4Q9C037 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC2.68□□□□□ -1.98
TRIM4Q9C037 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC2.68□□□□□ -1.98
TRIM4Q9C037 AL137847.3-201ENST00000611521 109 ntBASIC2.68□□□□□ -1.98
TRIM4Q9C037 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC2.68□□□□□ -1.98
TRIM4Q9C037 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC2.68□□□□□ -1.98
TRIM4Q9C037 PABPC1P7-201ENST00000413177 1513 ntBASIC2.68□□□□□ -1.98
TRIM4Q9C037 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
TRIM4Q9C037 AC009501.3-201ENST00000605001 1352 ntBASIC2.67□□□□□ -1.98
TRIM4Q9C037 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
TRIM4Q9C037 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
TRIM4Q9C037 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
TRIM4Q9C037 SNORA80E-201ENST00000384744 137 ntBASIC2.67□□□□□ -1.98
TRIM4Q9C037 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
TRIM4Q9C037 AC080125.1-201ENST00000414888 684 ntBASIC2.67□□□□□ -1.98
TRIM4Q9C037 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC2.67□□□□□ -1.98
TRIM4Q9C037 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC2.67□□□□□ -1.98
TRIM4Q9C037 RPS7P2-201ENST00000435134 607 ntBASIC2.67□□□□□ -1.98
TRIM4Q9C037 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC2.67□□□□□ -1.98
TRIM4Q9C037 RPS15AP7-201ENST00000439294 405 ntBASIC2.67□□□□□ -1.98
TRIM4Q9C037 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.67□□□□□ -1.98
TRIM4Q9C037 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.67□□□□□ -1.98
TRIM4Q9C037 HMGN1P8-201ENST00000463578 288 ntBASIC2.67□□□□□ -1.98
TRIM4Q9C037 HMGB1P25-201ENST00000468402 607 ntBASIC2.67□□□□□ -1.98
TRIM4Q9C037 SYPL1P1-201ENST00000473622 768 ntBASIC2.67□□□□□ -1.98
TRIM4Q9C037 AC008716.1-201ENST00000511084 513 ntBASIC2.67□□□□□ -1.98
TRIM4Q9C037 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC2.67□□□□□ -1.98
TRIM4Q9C037 AC008494.2-201ENST00000514544 370 ntBASIC2.67□□□□□ -1.98
TRIM4Q9C037 RNU1-104P-201ENST00000517280 175 ntBASIC2.67□□□□□ -1.98
TRIM4Q9C037 AP001646.1-201ENST00000527936 915 ntBASIC2.67□□□□□ -1.98
TRIM4Q9C037 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
TRIM4Q9C037 NOP56P3-201ENST00000549457 385 ntBASIC2.67□□□□□ -1.98
TRIM4Q9C037 AC015712.3-201ENST00000559380 164 ntBASIC2.67□□□□□ -1.98
TRIM4Q9C037 AC090751.1-201ENST00000566966 267 ntBASIC2.67□□□□□ -1.98
TRIM4Q9C037 AC020895.1-201ENST00000595362 272 ntBASIC2.67□□□□□ -1.98
TRIM4Q9C037 AC008687.2-201ENST00000597865 520 ntBASIC2.67□□□□□ -1.98
TRIM4Q9C037 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.67□□□□□ -1.98
TRIM4Q9C037 AC005046.1-201ENST00000608515 625 ntBASIC2.67□□□□□ -1.98
TRIM4Q9C037 AC006111.3-201ENST00000622137 383 ntBASIC2.67□□□□□ -1.98
TRIM4Q9C037 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC2.67□□□□□ -1.98
TRIM4Q9C037 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
TRIM4Q9C037 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.67□□□□□ -1.98
TRIM4Q9C037 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
TRIM4Q9C037 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
TRIM4Q9C037 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.66□□□□□ -1.98
TRIM4Q9C037 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
TRIM4Q9C037 RNVU1-3-201ENST00000364313 161 ntBASIC2.66□□□□□ -1.98
TRIM4Q9C037 RNU6-1181P-201ENST00000384191 106 ntBASIC2.66□□□□□ -1.98
TRIM4Q9C037 AL512633.1-201ENST00000399931 655 ntBASIC2.66□□□□□ -1.98
TRIM4Q9C037 CYCSP45-201ENST00000402289 315 ntBASIC2.66□□□□□ -1.98
TRIM4Q9C037 RPS4XP7-201ENST00000406274 780 ntBASIC2.66□□□□□ -1.98
TRIM4Q9C037 UQCRFS1P3-201ENST00000407697 385 ntBASIC2.66□□□□□ -1.98
TRIM4Q9C037 SNORA3.2-201ENST00000408221 125 ntBASIC2.66□□□□□ -1.98
TRIM4Q9C037 AC092447.6-201ENST00000414578 210 ntBASIC2.66□□□□□ -1.98
TRIM4Q9C037 TRAPPC2P4-201ENST00000421750 331 ntBASIC2.66□□□□□ -1.98
TRIM4Q9C037 MTATP6P4-201ENST00000427725 675 ntBASIC2.66□□□□□ -1.98
TRIM4Q9C037 AL591806.2-201ENST00000433122 173 ntBASIC2.66□□□□□ -1.98
TRIM4Q9C037 AC104058.1-201ENST00000448028 297 ntBASIC2.66□□□□□ -1.98
TRIM4Q9C037 RPS24P6-201ENST00000452670 400 ntBASIC2.66□□□□□ -1.98
TRIM4Q9C037 HMGB1P15-201ENST00000453854 435 ntBASIC2.66□□□□□ -1.98
TRIM4Q9C037 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC2.66□□□□□ -1.98
TRIM4Q9C037 RPS29P21-201ENST00000496272 170 ntBASIC2.66□□□□□ -1.98
TRIM4Q9C037 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
TRIM4Q9C037 AC008562.1-201ENST00000521763 330 ntBASIC2.66□□□□□ -1.98
TRIM4Q9C037 FAM60DP-201ENST00000524174 632 ntBASIC2.66□□□□□ -1.98
TRIM4Q9C037 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC2.66□□□□□ -1.98
TRIM4Q9C037 AC004923.2-201ENST00000529649 369 ntBASIC2.66□□□□□ -1.98
TRIM4Q9C037 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC2.66□□□□□ -1.98
TRIM4Q9C037 PRELID2P1-201ENST00000552837 301 ntBASIC2.66□□□□□ -1.98
TRIM4Q9C037 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
TRIM4Q9C037 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC2.66□□□□□ -1.98
TRIM4Q9C037 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC2.66□□□□□ -1.98
TRIM4Q9C037 AC008083.4-201ENST00000615076 444 ntBASIC2.66□□□□□ -1.98
TRIM4Q9C037 AC020923.1-201ENST00000624021 917 ntBASIC2.66□□□□□ -1.98
TRIM4Q9C037 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.66□□□□□ -1.98
TRIM4Q9C037 PABPC1P9-201ENST00000426076 1612 ntBASIC2.66□□□□□ -1.98
TRIM4Q9C037 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.66□□□□□ -1.98
TRIM4Q9C037 Z82209.1-201ENST00000422141 2135 ntBASIC2.65□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms