Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 AP003025.2-202ENST00000414466 4335 ntTSL 2 BASIC4.25□□□□□ -1.73
KRTAP3-3Q9BYR6 UBE2V1-204ENST00000371677 2459 ntTSL 2 BASIC4.24□□□□□ -1.73
KRTAP3-3Q9BYR6 WDR44-203ENST00000371825 4029 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
KRTAP3-3Q9BYR6 AL161912.2-201ENST00000565707 3007 ntBASIC4.24□□□□□ -1.73
KRTAP3-3Q9BYR6 FGF10-201ENST00000264664 2193 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
KRTAP3-3Q9BYR6 MIR137HG-205ENST00000634594 3586 ntTSL 5 BASIC4.24□□□□□ -1.73
KRTAP3-3Q9BYR6 EPB41-206ENST00000373798 5933 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
KRTAP3-3Q9BYR6 XIRP2-202ENST00000409043 3292 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
KRTAP3-3Q9BYR6 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
KRTAP3-3Q9BYR6 MTOR-201ENST00000361445 8677 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
KRTAP3-3Q9BYR6 AMPD3-202ENST00000396553 3680 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
KRTAP3-3Q9BYR6 ZNF317-201ENST00000247956 4073 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
KRTAP3-3Q9BYR6 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC4.24□□□□□ -1.73
KRTAP3-3Q9BYR6 PTPRD-211ENST00000486161 5039 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
KRTAP3-3Q9BYR6 SORBS2-201ENST00000284776 5996 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
KRTAP3-3Q9BYR6 SV2C-202ENST00000502798 11035 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
KRTAP3-3Q9BYR6 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
KRTAP3-3Q9BYR6 PTBP2-202ENST00000370198 3054 ntAPPRIS ALT1 TSL 1 (best) BASIC4.24□□□□□ -1.73
KRTAP3-3Q9BYR6 LINC02418-202ENST00000567788 4592 ntTSL 2 BASIC4.24□□□□□ -1.73
KRTAP3-3Q9BYR6 MMGT1-201ENST00000305963 3738 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
KRTAP3-3Q9BYR6 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
KRTAP3-3Q9BYR6 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.24□□□□□ -1.73
KRTAP3-3Q9BYR6 PCSK1-201ENST00000311106 5086 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
KRTAP3-3Q9BYR6 STK36-201ENST00000295709 4933 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
KRTAP3-3Q9BYR6 SYNPO2-203ENST00000434046 3588 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
KRTAP3-3Q9BYR6 AL049781.1-201ENST00000623195 3585 ntBASIC4.24□□□□□ -1.73
KRTAP3-3Q9BYR6 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC4.24□□□□□ -1.73
KRTAP3-3Q9BYR6 RNU6-335P-201ENST00000364563 113 ntBASIC4.24□□□□□ -1.73
KRTAP3-3Q9BYR6 Y_RNA.267-201ENST00000364679 109 ntBASIC4.24□□□□□ -1.73
KRTAP3-3Q9BYR6 MIR185-201ENST00000385288 82 ntBASIC4.24□□□□□ -1.73
KRTAP3-3Q9BYR6 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
KRTAP3-3Q9BYR6 MIR1253-201ENST00000408273 105 ntBASIC4.24□□□□□ -1.73
KRTAP3-3Q9BYR6 MIR1208-201ENST00000408334 73 ntBASIC4.24□□□□□ -1.73
KRTAP3-3Q9BYR6 RN7SKP110-201ENST00000410146 285 ntBASIC4.24□□□□□ -1.73
KRTAP3-3Q9BYR6 IGLVIVOR22-2-201ENST00000430579 330 ntBASIC4.24□□□□□ -1.73
KRTAP3-3Q9BYR6 AC092634.4-203ENST00000451395 448 ntBASIC4.24□□□□□ -1.73
KRTAP3-3Q9BYR6 PPIAP28-201ENST00000458378 485 ntBASIC4.24□□□□□ -1.73
KRTAP3-3Q9BYR6 RNU7-45P-201ENST00000459460 63 ntBASIC4.24□□□□□ -1.73
KRTAP3-3Q9BYR6 AC016968.1-201ENST00000479610 697 ntTSL 3 BASIC4.24□□□□□ -1.73
KRTAP3-3Q9BYR6 RN7SL316P-201ENST00000483452 272 ntBASIC4.24□□□□□ -1.73
KRTAP3-3Q9BYR6 AC093815.1-201ENST00000508637 280 ntBASIC4.24□□□□□ -1.73
KRTAP3-3Q9BYR6 AC110768.1-201ENST00000509222 400 ntBASIC4.24□□□□□ -1.73
KRTAP3-3Q9BYR6 KRTAP9-12P-201ENST00000514388 532 ntBASIC4.24□□□□□ -1.73
KRTAP3-3Q9BYR6 RN7SKP18-201ENST00000516005 275 ntBASIC4.24□□□□□ -1.73
KRTAP3-3Q9BYR6 MIR449C-201ENST00000516047 92 ntBASIC4.24□□□□□ -1.73
KRTAP3-3Q9BYR6 IGKV2D-18-201ENST00000519785 375 ntBASIC4.24□□□□□ -1.73
KRTAP3-3Q9BYR6 AC069287.2-201ENST00000526963 574 ntTSL 3 BASIC4.24□□□□□ -1.73
KRTAP3-3Q9BYR6 AC069240.1-201ENST00000548774 375 ntBASIC4.24□□□□□ -1.73
KRTAP3-3Q9BYR6 MTND5P40-201ENST00000559945 246 ntBASIC4.24□□□□□ -1.73
KRTAP3-3Q9BYR6 AC004147.5-201ENST00000581727 536 ntBASIC4.24□□□□□ -1.73
KRTAP3-3Q9BYR6 RN7SL731P-201ENST00000584329 293 ntBASIC4.24□□□□□ -1.73
KRTAP3-3Q9BYR6 AC124916.2-201ENST00000604416 224 ntBASIC4.24□□□□□ -1.73
KRTAP3-3Q9BYR6 HOXA11-AS1_2.1-201ENST00000615604 187 ntBASIC4.24□□□□□ -1.73
KRTAP3-3Q9BYR6 RN7SL673P-201ENST00000616262 237 ntBASIC4.24□□□□□ -1.73
KRTAP3-3Q9BYR6 Metazoa_SRP.126-201ENST00000618354 266 ntBASIC4.24□□□□□ -1.73
KRTAP3-3Q9BYR6 AC069503.3-201ENST00000618674 145 ntBASIC4.24□□□□□ -1.73
KRTAP3-3Q9BYR6 RN7SL719P-201ENST00000620196 237 ntBASIC4.24□□□□□ -1.73
KRTAP3-3Q9BYR6 RN7SL469P-201ENST00000621501 237 ntBASIC4.24□□□□□ -1.73
KRTAP3-3Q9BYR6 SPATA31A6-201ENST00000332857 4209 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
KRTAP3-3Q9BYR6 DPF3-216ENST00000614862 4221 ntTSL 5 BASIC4.24□□□□□ -1.73
KRTAP3-3Q9BYR6 ANKRD50-201ENST00000504087 8794 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
KRTAP3-3Q9BYR6 MAPK10-313ENST00000641405 2469 ntBASIC4.24□□□□□ -1.73
KRTAP3-3Q9BYR6 STARD4-AS1-201ENST00000500779 5525 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
KRTAP3-3Q9BYR6 AC009108.3-201ENST00000602739 3515 ntBASIC4.24□□□□□ -1.73
KRTAP3-3Q9BYR6 C4orf46-202ENST00000508457 3358 ntTSL 5 BASIC4.24□□□□□ -1.73
KRTAP3-3Q9BYR6 AL034549.2-201ENST00000618285 3373 ntBASIC4.24□□□□□ -1.73
KRTAP3-3Q9BYR6 ZKSCAN1-201ENST00000324306 9418 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
KRTAP3-3Q9BYR6 OTX2-AS1-201ENST00000534909 2428 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
KRTAP3-3Q9BYR6 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
KRTAP3-3Q9BYR6 AP003486.1-201ENST00000525716 3994 ntBASIC4.24□□□□□ -1.73
KRTAP3-3Q9BYR6 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
KRTAP3-3Q9BYR6 WDR78-203ENST00000371026 3848 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
KRTAP3-3Q9BYR6 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
KRTAP3-3Q9BYR6 NAT10-205ENST00000531159 3436 ntAPPRIS ALT2 TSL 2 BASIC4.24□□□□□ -1.73
KRTAP3-3Q9BYR6 SLC25A16-207ENST00000609923 6529 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
KRTAP3-3Q9BYR6 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.24□□□□□ -1.73
KRTAP3-3Q9BYR6 RSL1D1-204ENST00000571133 5483 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
KRTAP3-3Q9BYR6 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
KRTAP3-3Q9BYR6 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
KRTAP3-3Q9BYR6 OR10K2-202ENST00000641042 3023 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
KRTAP3-3Q9BYR6 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
KRTAP3-3Q9BYR6 GON4L-219ENST00000622608 4801 ntTSL 5 BASIC4.24□□□□□ -1.73
KRTAP3-3Q9BYR6 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
KRTAP3-3Q9BYR6 AKAP12-203ENST00000359755 6190 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
KRTAP3-3Q9BYR6 SCRN1-201ENST00000242059 5257 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
KRTAP3-3Q9BYR6 RECQL5-203ENST00000420326 3710 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
KRTAP3-3Q9BYR6 ADA2-204ENST00000399839 3986 ntAPPRIS P3 TSL 5 BASIC4.23□□□□□ -1.73
KRTAP3-3Q9BYR6 AC132825.3-201ENST00000562182 4710 ntBASIC4.23□□□□□ -1.73
KRTAP3-3Q9BYR6 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
KRTAP3-3Q9BYR6 NAV2-213ENST00000533917 5084 ntTSL 2 BASIC4.23□□□□□ -1.73
KRTAP3-3Q9BYR6 MAP9-201ENST00000311277 7333 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
KRTAP3-3Q9BYR6 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
KRTAP3-3Q9BYR6 PIWIL4-201ENST00000299001 3199 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
KRTAP3-3Q9BYR6 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
KRTAP3-3Q9BYR6 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
KRTAP3-3Q9BYR6 ZNF229-204ENST00000614049 4507 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
KRTAP3-3Q9BYR6 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.23□□□□□ -1.73
KRTAP3-3Q9BYR6 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
KRTAP3-3Q9BYR6 MLYCD-201ENST00000262430 13038 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
KRTAP3-3Q9BYR6 ZNF322-208ENST00000622479 4882 ntAPPRIS P1 TSL 4 BASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 119.9 ms