Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
COL25A1Q9BXS0 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
COL25A1Q9BXS0 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
COL25A1Q9BXS0 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
COL25A1Q9BXS0 AC105235.1-201ENST00000623208 1816 ntBASIC5.63□□□□□ -1.51
COL25A1Q9BXS0 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
COL25A1Q9BXS0 RNA5SP28-201ENST00000363841 119 ntBASIC5.63□□□□□ -1.51
COL25A1Q9BXS0 SNORD46.1-201ENST00000364139 104 ntBASIC5.63□□□□□ -1.51
COL25A1Q9BXS0 Y_RNA.240-201ENST00000364469 95 ntBASIC5.63□□□□□ -1.51
COL25A1Q9BXS0 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
COL25A1Q9BXS0 SNORA16A-201ENST00000384342 137 ntBASIC5.63□□□□□ -1.51
COL25A1Q9BXS0 AL080315.1-201ENST00000406055 466 ntBASIC5.63□□□□□ -1.51
COL25A1Q9BXS0 RNU6ATAC15P-201ENST00000408279 121 ntBASIC5.63□□□□□ -1.51
COL25A1Q9BXS0 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC5.63□□□□□ -1.51
COL25A1Q9BXS0 AL354766.1-201ENST00000423396 542 ntBASIC5.63□□□□□ -1.51
COL25A1Q9BXS0 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC5.63□□□□□ -1.51
COL25A1Q9BXS0 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC5.63□□□□□ -1.51
COL25A1Q9BXS0 BTF3P6-201ENST00000448054 499 ntBASIC5.63□□□□□ -1.51
COL25A1Q9BXS0 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC5.63□□□□□ -1.51
COL25A1Q9BXS0 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.63□□□□□ -1.51
COL25A1Q9BXS0 AL359273.1-201ENST00000510918 627 ntBASIC5.63□□□□□ -1.51
COL25A1Q9BXS0 AC006499.6-201ENST00000511169 607 ntBASIC5.63□□□□□ -1.51
COL25A1Q9BXS0 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
COL25A1Q9BXS0 RANP3-201ENST00000530970 276 ntBASIC5.63□□□□□ -1.51
COL25A1Q9BXS0 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC5.63□□□□□ -1.51
COL25A1Q9BXS0 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC5.63□□□□□ -1.51
COL25A1Q9BXS0 HNRNPCP4-201ENST00000571636 900 ntBASIC5.63□□□□□ -1.51
COL25A1Q9BXS0 SNORD39.2-201ENST00000579995 76 ntBASIC5.63□□□□□ -1.51
COL25A1Q9BXS0 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.63□□□□□ -1.51
COL25A1Q9BXS0 AC023575.1-201ENST00000580510 358 ntBASIC5.63□□□□□ -1.51
COL25A1Q9BXS0 MIR3667-201ENST00000581025 74 ntBASIC5.63□□□□□ -1.51
COL25A1Q9BXS0 AL161756.2-201ENST00000604597 246 ntBASIC5.63□□□□□ -1.51
COL25A1Q9BXS0 AC023813.4-201ENST00000607580 580 ntBASIC5.63□□□□□ -1.51
COL25A1Q9BXS0 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC5.63□□□□□ -1.51
COL25A1Q9BXS0 AL359547.2-201ENST00000615810 418 ntBASIC5.63□□□□□ -1.51
COL25A1Q9BXS0 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.63□□□□□ -1.51
COL25A1Q9BXS0 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC5.63□□□□□ -1.51
COL25A1Q9BXS0 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
COL25A1Q9BXS0 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.63□□□□□ -1.51
COL25A1Q9BXS0 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
COL25A1Q9BXS0 AC005332.9-201ENST00000620266 2921 ntBASIC5.63□□□□□ -1.51
COL25A1Q9BXS0 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
COL25A1Q9BXS0 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
COL25A1Q9BXS0 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
COL25A1Q9BXS0 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC5.63□□□□□ -1.51
COL25A1Q9BXS0 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
COL25A1Q9BXS0 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
COL25A1Q9BXS0 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.62□□□□□ -1.51
COL25A1Q9BXS0 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
COL25A1Q9BXS0 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
COL25A1Q9BXS0 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
COL25A1Q9BXS0 AL121950.1-201ENST00000624993 2077 ntBASIC5.62□□□□□ -1.51
COL25A1Q9BXS0 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
COL25A1Q9BXS0 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
COL25A1Q9BXS0 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
COL25A1Q9BXS0 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
COL25A1Q9BXS0 RNU6-1298P-201ENST00000362456 101 ntBASIC5.62□□□□□ -1.51
COL25A1Q9BXS0 RNU6-960P-201ENST00000364056 120 ntBASIC5.62□□□□□ -1.51
COL25A1Q9BXS0 RNU1-24P-201ENST00000364285 165 ntBASIC5.62□□□□□ -1.51
COL25A1Q9BXS0 RNU6-434P-201ENST00000384376 107 ntBASIC5.62□□□□□ -1.51
COL25A1Q9BXS0 MIR649-201ENST00000384843 97 ntBASIC5.62□□□□□ -1.51
COL25A1Q9BXS0 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
COL25A1Q9BXS0 AL023807.1-201ENST00000407932 359 ntBASIC5.62□□□□□ -1.51
COL25A1Q9BXS0 HMGN1P24-201ENST00000412282 298 ntBASIC5.62□□□□□ -1.51
COL25A1Q9BXS0 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC5.62□□□□□ -1.51
COL25A1Q9BXS0 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC5.62□□□□□ -1.51
COL25A1Q9BXS0 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC5.62□□□□□ -1.51
COL25A1Q9BXS0 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC5.62□□□□□ -1.51
COL25A1Q9BXS0 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC5.62□□□□□ -1.51
COL25A1Q9BXS0 UBE2V1P4-201ENST00000425374 344 ntBASIC5.62□□□□□ -1.51
COL25A1Q9BXS0 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC5.62□□□□□ -1.51
COL25A1Q9BXS0 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC5.62□□□□□ -1.51
COL25A1Q9BXS0 AP001992.1-205ENST00000462248 379 ntBASIC5.62□□□□□ -1.51
COL25A1Q9BXS0 COX6CP14-201ENST00000469580 174 ntBASIC5.62□□□□□ -1.51
COL25A1Q9BXS0 AC097484.1-201ENST00000471148 389 ntBASIC5.62□□□□□ -1.51
COL25A1Q9BXS0 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.62□□□□□ -1.51
COL25A1Q9BXS0 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC5.62□□□□□ -1.51
COL25A1Q9BXS0 SEPT14P8-201ENST00000508026 178 ntBASIC5.62□□□□□ -1.51
COL25A1Q9BXS0 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
COL25A1Q9BXS0 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC5.62□□□□□ -1.51
COL25A1Q9BXS0 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC5.62□□□□□ -1.51
COL25A1Q9BXS0 MRPS18CP4-201ENST00000535821 231 ntBASIC5.62□□□□□ -1.51
COL25A1Q9BXS0 SULT1C2P2-201ENST00000562517 294 ntBASIC5.62□□□□□ -1.51
COL25A1Q9BXS0 AC090615.1-201ENST00000577519 154 ntBASIC5.62□□□□□ -1.51
COL25A1Q9BXS0 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC5.62□□□□□ -1.51
COL25A1Q9BXS0 MIR4691-201ENST00000583764 85 ntBASIC5.62□□□□□ -1.51
COL25A1Q9BXS0 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC5.62□□□□□ -1.51
COL25A1Q9BXS0 AL356218.2-201ENST00000605264 187 ntBASIC5.62□□□□□ -1.51
COL25A1Q9BXS0 MIR1244-1-201ENST00000612829 85 ntBASIC5.62□□□□□ -1.51
COL25A1Q9BXS0 AL596245.1-201ENST00000618994 362 ntBASIC5.62□□□□□ -1.51
COL25A1Q9BXS0 MIR6075-201ENST00000620782 95 ntBASIC5.62□□□□□ -1.51
COL25A1Q9BXS0 AL136313.1-201ENST00000624804 202 ntBASIC5.62□□□□□ -1.51
COL25A1Q9BXS0 MIR1244-3-201ENST00000635744 85 ntBASIC5.62□□□□□ -1.51
COL25A1Q9BXS0 MIR1244-2-201ENST00000636449 85 ntBASIC5.62□□□□□ -1.51
COL25A1Q9BXS0 MIR1244-4-202ENST00000636813 85 ntBASIC5.62□□□□□ -1.51
COL25A1Q9BXS0 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
COL25A1Q9BXS0 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.62□□□□□ -1.51
COL25A1Q9BXS0 AL359195.2-201ENST00000623657 4412 ntBASIC5.62□□□□□ -1.51
COL25A1Q9BXS0 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
COL25A1Q9BXS0 AC140479.2-201ENST00000421567 3130 ntBASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 126.7 ms