Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 RNU7-180P-201ENST00000459240 63 ntBASIC5.74□□□□□ -1.49
TRAIPQ9BWF2 AC116533.1-201ENST00000459748 321 ntBASIC5.74□□□□□ -1.49
TRAIPQ9BWF2 RPS15AP34-201ENST00000487776 387 ntBASIC5.74□□□□□ -1.49
TRAIPQ9BWF2 ALDH7A1P3-201ENST00000492517 345 ntBASIC5.74□□□□□ -1.49
TRAIPQ9BWF2 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
TRAIPQ9BWF2 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC5.74□□□□□ -1.49
TRAIPQ9BWF2 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.74□□□□□ -1.49
TRAIPQ9BWF2 SCARNA15.2-201ENST00000516409 127 ntBASIC5.74□□□□□ -1.49
TRAIPQ9BWF2 RNA5SP291-201ENST00000517222 105 ntBASIC5.74□□□□□ -1.49
TRAIPQ9BWF2 RANP9-201ENST00000519957 271 ntBASIC5.74□□□□□ -1.49
TRAIPQ9BWF2 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.74□□□□□ -1.49
TRAIPQ9BWF2 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC5.74□□□□□ -1.49
TRAIPQ9BWF2 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC5.74□□□□□ -1.49
TRAIPQ9BWF2 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC5.74□□□□□ -1.49
TRAIPQ9BWF2 AC013553.2-201ENST00000604244 589 ntBASIC5.74□□□□□ -1.49
TRAIPQ9BWF2 AC009994.1-201ENST00000606889 253 ntBASIC5.74□□□□□ -1.49
TRAIPQ9BWF2 AC022893.3-201ENST00000607665 437 ntBASIC5.74□□□□□ -1.49
TRAIPQ9BWF2 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.74□□□□□ -1.49
TRAIPQ9BWF2 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
TRAIPQ9BWF2 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.74□□□□□ -1.49
TRAIPQ9BWF2 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.74□□□□□ -1.49
TRAIPQ9BWF2 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
TRAIPQ9BWF2 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
TRAIPQ9BWF2 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.74□□□□□ -1.49
TRAIPQ9BWF2 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.74□□□□□ -1.49
TRAIPQ9BWF2 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
TRAIPQ9BWF2 AL360270.2-201ENST00000562952 5985 ntBASIC5.74□□□□□ -1.49
TRAIPQ9BWF2 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
TRAIPQ9BWF2 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
TRAIPQ9BWF2 AC092376.2-201ENST00000622621 4116 ntBASIC5.73□□□□□ -1.49
TRAIPQ9BWF2 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.73□□□□□ -1.49
TRAIPQ9BWF2 PNPT1P2-201ENST00000456768 2050 ntBASIC5.73□□□□□ -1.49
TRAIPQ9BWF2 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.73□□□□□ -1.49
TRAIPQ9BWF2 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
TRAIPQ9BWF2 ARHGAP42P3-201ENST00000443989 2508 ntBASIC5.73□□□□□ -1.49
TRAIPQ9BWF2 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
TRAIPQ9BWF2 SNURFL-201ENST00000309296 343 ntBASIC5.73□□□□□ -1.49
TRAIPQ9BWF2 Y_RNA.373-201ENST00000365600 103 ntBASIC5.73□□□□□ -1.49
TRAIPQ9BWF2 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
TRAIPQ9BWF2 RNU6-38P-201ENST00000384085 107 ntBASIC5.73□□□□□ -1.49
TRAIPQ9BWF2 MT-TD-201ENST00000387419 68 ntBASIC5.73□□□□□ -1.49
TRAIPQ9BWF2 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.73□□□□□ -1.49
TRAIPQ9BWF2 CRYBB2P1-203ENST00000415709 538 ntBASIC5.73□□□□□ -1.49
TRAIPQ9BWF2 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC5.73□□□□□ -1.49
TRAIPQ9BWF2 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC5.73□□□□□ -1.49
TRAIPQ9BWF2 AC092647.2-201ENST00000452998 253 ntBASIC5.73□□□□□ -1.49
TRAIPQ9BWF2 RNU6-333P-201ENST00000459117 107 ntBASIC5.73□□□□□ -1.49
TRAIPQ9BWF2 AC004801.2-202ENST00000463559 283 ntBASIC5.73□□□□□ -1.49
TRAIPQ9BWF2 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC5.73□□□□□ -1.49
TRAIPQ9BWF2 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
TRAIPQ9BWF2 AC098591.2-201ENST00000510152 315 ntBASIC5.73□□□□□ -1.49
TRAIPQ9BWF2 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC5.73□□□□□ -1.49
TRAIPQ9BWF2 SNORA31.3-201ENST00000516029 96 ntBASIC5.73□□□□□ -1.49
TRAIPQ9BWF2 RNA5SP230-201ENST00000517039 122 ntBASIC5.73□□□□□ -1.49
TRAIPQ9BWF2 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.73□□□□□ -1.49
TRAIPQ9BWF2 AC012400.1-201ENST00000518452 381 ntBASIC5.73□□□□□ -1.49
TRAIPQ9BWF2 PSMA2P1-201ENST00000526365 646 ntBASIC5.73□□□□□ -1.49
TRAIPQ9BWF2 AC023050.3-201ENST00000541142 333 ntBASIC5.73□□□□□ -1.49
TRAIPQ9BWF2 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC5.73□□□□□ -1.49
TRAIPQ9BWF2 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.73□□□□□ -1.49
TRAIPQ9BWF2 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC5.73□□□□□ -1.49
TRAIPQ9BWF2 AC005668.1-201ENST00000571142 476 ntBASIC5.73□□□□□ -1.49
TRAIPQ9BWF2 MTCYBP13-201ENST00000578634 1093 ntBASIC5.73□□□□□ -1.49
TRAIPQ9BWF2 AC091135.1-201ENST00000585943 307 ntBASIC5.73□□□□□ -1.49
TRAIPQ9BWF2 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC5.73□□□□□ -1.49
TRAIPQ9BWF2 AC034102.8-201ENST00000615146 484 ntBASIC5.73□□□□□ -1.49
TRAIPQ9BWF2 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC5.73□□□□□ -1.49
TRAIPQ9BWF2 AC135068.12-201ENST00000637370 931 ntBASIC5.73□□□□□ -1.49
TRAIPQ9BWF2 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC5.73□□□□□ -1.49
TRAIPQ9BWF2 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
TRAIPQ9BWF2 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.73□□□□□ -1.49
TRAIPQ9BWF2 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
TRAIPQ9BWF2 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.73□□□□□ -1.49
TRAIPQ9BWF2 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
TRAIPQ9BWF2 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
TRAIPQ9BWF2 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.72□□□□□ -1.49
TRAIPQ9BWF2 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
TRAIPQ9BWF2 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.72□□□□□ -1.49
TRAIPQ9BWF2 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
TRAIPQ9BWF2 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
TRAIPQ9BWF2 RNA5SP129-201ENST00000410276 118 ntBASIC5.72□□□□□ -1.49
TRAIPQ9BWF2 RPS12P24-201ENST00000412619 387 ntBASIC5.72□□□□□ -1.49
TRAIPQ9BWF2 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC5.72□□□□□ -1.49
TRAIPQ9BWF2 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.72□□□□□ -1.49
TRAIPQ9BWF2 MTND3P23-201ENST00000431980 347 ntBASIC5.72□□□□□ -1.49
TRAIPQ9BWF2 AC093414.1-201ENST00000434712 514 ntBASIC5.72□□□□□ -1.49
TRAIPQ9BWF2 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.72□□□□□ -1.49
TRAIPQ9BWF2 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC5.72□□□□□ -1.49
TRAIPQ9BWF2 EIF4EBP2P1-201ENST00000450009 343 ntBASIC5.72□□□□□ -1.49
TRAIPQ9BWF2 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
TRAIPQ9BWF2 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC5.72□□□□□ -1.49
TRAIPQ9BWF2 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC5.72□□□□□ -1.49
TRAIPQ9BWF2 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
TRAIPQ9BWF2 AC083829.1-201ENST00000503756 657 ntBASIC5.72□□□□□ -1.49
TRAIPQ9BWF2 AC022360.1-201ENST00000521058 340 ntBASIC5.72□□□□□ -1.49
TRAIPQ9BWF2 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC5.72□□□□□ -1.49
TRAIPQ9BWF2 FGF7P1-201ENST00000582820 288 ntBASIC5.72□□□□□ -1.49
TRAIPQ9BWF2 MIR4660-201ENST00000583549 74 ntBASIC5.72□□□□□ -1.49
TRAIPQ9BWF2 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.72□□□□□ -1.49
TRAIPQ9BWF2 AC107294.1-201ENST00000609524 467 ntBASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms