Protein–RNA interactions for Protein: Q96RK1

CITED4, Cbp/p300-interacting transactivator 4, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CITED4Q96RK1 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC5.08□□□□□ -1.6
CITED4Q96RK1 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CITED4Q96RK1 Y_RNA.33-201ENST00000362591 102 ntBASIC5.08□□□□□ -1.6
CITED4Q96RK1 RNU1-65P-201ENST00000363919 148 ntBASIC5.08□□□□□ -1.6
CITED4Q96RK1 RN7SKP128-201ENST00000364270 303 ntBASIC5.08□□□□□ -1.6
CITED4Q96RK1 SNORA64.3-201ENST00000365647 134 ntBASIC5.08□□□□□ -1.6
CITED4Q96RK1 AL353621.1-201ENST00000418219 243 ntBASIC5.08□□□□□ -1.6
CITED4Q96RK1 TOMM22P1-201ENST00000418578 312 ntBASIC5.08□□□□□ -1.6
CITED4Q96RK1 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC5.08□□□□□ -1.6
CITED4Q96RK1 AC007919.1-201ENST00000429380 217 ntBASIC5.08□□□□□ -1.6
CITED4Q96RK1 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.08□□□□□ -1.6
CITED4Q96RK1 SNRPEP4-201ENST00000435815 279 ntBASIC5.08□□□□□ -1.6
CITED4Q96RK1 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC5.08□□□□□ -1.6
CITED4Q96RK1 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC5.08□□□□□ -1.6
CITED4Q96RK1 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC5.08□□□□□ -1.6
CITED4Q96RK1 DHFRP3-201ENST00000455595 559 ntBASIC5.08□□□□□ -1.6
CITED4Q96RK1 AC128713.1-201ENST00000471495 306 ntBASIC5.08□□□□□ -1.6
CITED4Q96RK1 RPS4XP1-201ENST00000482189 787 ntBASIC5.08□□□□□ -1.6
CITED4Q96RK1 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC5.08□□□□□ -1.6
CITED4Q96RK1 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CITED4Q96RK1 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC5.08□□□□□ -1.6
CITED4Q96RK1 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC5.08□□□□□ -1.6
CITED4Q96RK1 LRRC37A5P-203ENST00000580181 585 ntBASIC5.08□□□□□ -1.6
CITED4Q96RK1 RN7SL230P-201ENST00000580835 303 ntBASIC5.08□□□□□ -1.6
CITED4Q96RK1 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CITED4Q96RK1 AL161798.1-201ENST00000604630 131 ntBASIC5.08□□□□□ -1.6
CITED4Q96RK1 MIR6133-201ENST00000617057 108 ntBASIC5.08□□□□□ -1.6
CITED4Q96RK1 AL360181.4-201ENST00000621752 134 ntBASIC5.08□□□□□ -1.6
CITED4Q96RK1 BMS1P21-201ENST00000634565 365 ntBASIC5.08□□□□□ -1.6
CITED4Q96RK1 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC5.08□□□□□ -1.6
CITED4Q96RK1 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
CITED4Q96RK1 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CITED4Q96RK1 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CITED4Q96RK1 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CITED4Q96RK1 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC5.07□□□□□ -1.6
CITED4Q96RK1 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CITED4Q96RK1 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CITED4Q96RK1 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
CITED4Q96RK1 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC5.07□□□□□ -1.6
CITED4Q96RK1 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
CITED4Q96RK1 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CITED4Q96RK1 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
CITED4Q96RK1 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CITED4Q96RK1 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CITED4Q96RK1 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
CITED4Q96RK1 ODF3-202ENST00000342593 386 ntTSL 5 BASIC5.07□□□□□ -1.6
CITED4Q96RK1 Y_RNA.149-201ENST00000363558 117 ntBASIC5.07□□□□□ -1.6
CITED4Q96RK1 SNORA70.3-201ENST00000365075 132 ntBASIC5.07□□□□□ -1.6
CITED4Q96RK1 RNU6-395P-201ENST00000365662 106 ntBASIC5.07□□□□□ -1.6
CITED4Q96RK1 Y_RNA.389-201ENST00000383924 113 ntBASIC5.07□□□□□ -1.6
CITED4Q96RK1 Y_RNA.401-201ENST00000383965 117 ntBASIC5.07□□□□□ -1.6
CITED4Q96RK1 RNU6-842P-201ENST00000384269 107 ntBASIC5.07□□□□□ -1.6
CITED4Q96RK1 RNU6-933P-201ENST00000384424 107 ntBASIC5.07□□□□□ -1.6
CITED4Q96RK1 Y_RNA.496-201ENST00000384444 101 ntBASIC5.07□□□□□ -1.6
CITED4Q96RK1 SNORA7A-201ENST00000384765 139 ntBASIC5.07□□□□□ -1.6
CITED4Q96RK1 MIR568-201ENST00000385036 95 ntBASIC5.07□□□□□ -1.6
CITED4Q96RK1 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
CITED4Q96RK1 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
CITED4Q96RK1 TANK-203ENST00000402568 878 ntTSL 5 BASIC5.07□□□□□ -1.6
CITED4Q96RK1 MIR1302-3-201ENST00000408128 138 ntBASIC5.07□□□□□ -1.6
CITED4Q96RK1 RNU6-1025P-201ENST00000410629 104 ntBASIC5.07□□□□□ -1.6
CITED4Q96RK1 RNU6-55P-201ENST00000411092 107 ntBASIC5.07□□□□□ -1.6
CITED4Q96RK1 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
CITED4Q96RK1 CYCSP33-201ENST00000414485 327 ntBASIC5.07□□□□□ -1.6
CITED4Q96RK1 SYF2P2-201ENST00000417620 583 ntBASIC5.07□□□□□ -1.6
CITED4Q96RK1 AF186996.5-201ENST00000418098 904 ntBASIC5.07□□□□□ -1.6
CITED4Q96RK1 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC5.07□□□□□ -1.6
CITED4Q96RK1 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC5.07□□□□□ -1.6
CITED4Q96RK1 NOTCH2P1-201ENST00000443481 624 ntBASIC5.07□□□□□ -1.6
CITED4Q96RK1 RPL23AP28-201ENST00000448062 470 ntBASIC5.07□□□□□ -1.6
CITED4Q96RK1 AL121578.2-201ENST00000448797 447 ntBASIC5.07□□□□□ -1.6
CITED4Q96RK1 snoU13.4-201ENST00000458916 104 ntBASIC5.07□□□□□ -1.6
CITED4Q96RK1 RPS3AP41-201ENST00000462701 778 ntBASIC5.07□□□□□ -1.6
CITED4Q96RK1 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC5.07□□□□□ -1.6
CITED4Q96RK1 AC022215.1-201ENST00000481770 362 ntBASIC5.07□□□□□ -1.6
CITED4Q96RK1 AC022493.1-201ENST00000492984 337 ntBASIC5.07□□□□□ -1.6
CITED4Q96RK1 CEACAMP10-202ENST00000495431 496 ntBASIC5.07□□□□□ -1.6
CITED4Q96RK1 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC5.07□□□□□ -1.6
CITED4Q96RK1 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC5.07□□□□□ -1.6
CITED4Q96RK1 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC5.07□□□□□ -1.6
CITED4Q96RK1 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.07□□□□□ -1.6
CITED4Q96RK1 RNU6-1256P-201ENST00000516539 103 ntBASIC5.07□□□□□ -1.6
CITED4Q96RK1 IGLV3-24-201ENST00000517477 197 ntBASIC5.07□□□□□ -1.6
CITED4Q96RK1 UTP23-205ENST00000520733 369 ntTSL 3 BASIC5.07□□□□□ -1.6
CITED4Q96RK1 TRAV37-201ENST00000553906 342 ntBASIC5.07□□□□□ -1.6
CITED4Q96RK1 MED28P6-201ENST00000558776 231 ntBASIC5.07□□□□□ -1.6
CITED4Q96RK1 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC5.07□□□□□ -1.6
CITED4Q96RK1 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
CITED4Q96RK1 MIR4273-201ENST00000582824 84 ntBASIC5.07□□□□□ -1.6
CITED4Q96RK1 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC5.07□□□□□ -1.6
CITED4Q96RK1 AC005332.4-201ENST00000592752 579 ntBASIC5.07□□□□□ -1.6
CITED4Q96RK1 AC068790.4-201ENST00000602474 263 ntBASIC5.07□□□□□ -1.6
CITED4Q96RK1 AL499605.1-201ENST00000604628 403 ntBASIC5.07□□□□□ -1.6
CITED4Q96RK1 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC5.07□□□□□ -1.6
CITED4Q96RK1 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CITED4Q96RK1 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.07□□□□□ -1.6
CITED4Q96RK1 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CITED4Q96RK1 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.07□□□□□ -1.6
CITED4Q96RK1 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CITED4Q96RK1 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms