Protein–RNA interactions for Protein: Q96KR7

PHACTR3, Phosphatase and actin regulator 3, humanhuman

Predictions only

Length 559 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR3Q96KR7 MIR183-201ENST00000384958 110 ntBASIC4.8□□□□□ -1.64
PHACTR3Q96KR7 Y_RNA.598-201ENST00000410480 95 ntBASIC4.8□□□□□ -1.64
PHACTR3Q96KR7 RPS29P4-201ENST00000414733 161 ntBASIC4.8□□□□□ -1.64
PHACTR3Q96KR7 HMGB3P23-201ENST00000414981 585 ntBASIC4.8□□□□□ -1.64
PHACTR3Q96KR7 USP9YP13-201ENST00000417797 480 ntBASIC4.8□□□□□ -1.64
PHACTR3Q96KR7 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC4.8□□□□□ -1.64
PHACTR3Q96KR7 CYCSP4-201ENST00000429682 331 ntBASIC4.8□□□□□ -1.64
PHACTR3Q96KR7 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.8□□□□□ -1.64
PHACTR3Q96KR7 snoU13.22-201ENST00000459428 104 ntBASIC4.8□□□□□ -1.64
PHACTR3Q96KR7 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC4.8□□□□□ -1.64
PHACTR3Q96KR7 RN7SL293P-201ENST00000481765 281 ntBASIC4.8□□□□□ -1.64
PHACTR3Q96KR7 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.8□□□□□ -1.64
PHACTR3Q96KR7 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC4.8□□□□□ -1.64
PHACTR3Q96KR7 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
PHACTR3Q96KR7 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC4.8□□□□□ -1.64
PHACTR3Q96KR7 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC4.8□□□□□ -1.64
PHACTR3Q96KR7 RANP9-201ENST00000519957 271 ntBASIC4.8□□□□□ -1.64
PHACTR3Q96KR7 AC022878.1-201ENST00000530684 149 ntBASIC4.8□□□□□ -1.64
PHACTR3Q96KR7 AP004247.1-201ENST00000531556 1289 ntBASIC4.8□□□□□ -1.64
PHACTR3Q96KR7 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC4.8□□□□□ -1.64
PHACTR3Q96KR7 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC4.8□□□□□ -1.64
PHACTR3Q96KR7 MIR3913-1-201ENST00000577744 102 ntBASIC4.8□□□□□ -1.64
PHACTR3Q96KR7 MIR4307-201ENST00000582802 84 ntBASIC4.8□□□□□ -1.64
PHACTR3Q96KR7 AL161729.4-201ENST00000604650 476 ntBASIC4.8□□□□□ -1.64
PHACTR3Q96KR7 AC091304.9-201ENST00000612091 226 ntBASIC4.8□□□□□ -1.64
PHACTR3Q96KR7 DLEU1_2.1-201ENST00000617920 342 ntBASIC4.8□□□□□ -1.64
PHACTR3Q96KR7 AC136475.10-201ENST00000620253 385 ntBASIC4.8□□□□□ -1.64
PHACTR3Q96KR7 CR381653.2-201ENST00000624041 768 ntBASIC4.8□□□□□ -1.64
PHACTR3Q96KR7 AL157786.1-207ENST00000627771 695 ntBASIC4.8□□□□□ -1.64
PHACTR3Q96KR7 AC093591.3-201ENST00000634516 308 ntBASIC4.8□□□□□ -1.64
PHACTR3Q96KR7 U6.105-201ENST00000637379 88 ntBASIC4.8□□□□□ -1.64
PHACTR3Q96KR7 ELF2P3-201ENST00000445099 1506 ntBASIC4.8□□□□□ -1.64
PHACTR3Q96KR7 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.8□□□□□ -1.64
PHACTR3Q96KR7 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
PHACTR3Q96KR7 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
PHACTR3Q96KR7 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
PHACTR3Q96KR7 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PHACTR3Q96KR7 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4.79□□□□□ -1.64
PHACTR3Q96KR7 Y_RNA.256-201ENST00000364594 104 ntBASIC4.79□□□□□ -1.64
PHACTR3Q96KR7 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC4.79□□□□□ -1.64
PHACTR3Q96KR7 NFIB-202ENST00000380924 840 ntTSL 5 BASIC4.79□□□□□ -1.64
PHACTR3Q96KR7 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
PHACTR3Q96KR7 RN7SKP266-201ENST00000410232 287 ntBASIC4.79□□□□□ -1.64
PHACTR3Q96KR7 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.79□□□□□ -1.64
PHACTR3Q96KR7 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC4.79□□□□□ -1.64
PHACTR3Q96KR7 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC4.79□□□□□ -1.64
PHACTR3Q96KR7 RPL7P30-201ENST00000420888 709 ntBASIC4.79□□□□□ -1.64
PHACTR3Q96KR7 AC009965.2-201ENST00000425328 970 ntBASIC4.79□□□□□ -1.64
PHACTR3Q96KR7 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.79□□□□□ -1.64
PHACTR3Q96KR7 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC4.79□□□□□ -1.64
PHACTR3Q96KR7 AC092427.1-201ENST00000439177 601 ntBASIC4.79□□□□□ -1.64
PHACTR3Q96KR7 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC4.79□□□□□ -1.64
PHACTR3Q96KR7 RPL39P6-201ENST00000448289 150 ntBASIC4.79□□□□□ -1.64
PHACTR3Q96KR7 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC4.79□□□□□ -1.64
PHACTR3Q96KR7 MEMO1P3-201ENST00000459811 302 ntBASIC4.79□□□□□ -1.64
PHACTR3Q96KR7 AC010469.1-201ENST00000463864 576 ntBASIC4.79□□□□□ -1.64
PHACTR3Q96KR7 AC146507.1-201ENST00000468335 354 ntBASIC4.79□□□□□ -1.64
PHACTR3Q96KR7 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC4.79□□□□□ -1.64
PHACTR3Q96KR7 AC069499.1-201ENST00000489433 509 ntBASIC4.79□□□□□ -1.64
PHACTR3Q96KR7 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PHACTR3Q96KR7 AC008549.1-201ENST00000512900 643 ntBASIC4.79□□□□□ -1.64
PHACTR3Q96KR7 AC107918.3-201ENST00000533272 382 ntBASIC4.79□□□□□ -1.64
PHACTR3Q96KR7 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC4.79□□□□□ -1.64
PHACTR3Q96KR7 CFL2-206ENST00000556161 546 ntTSL 4 BASIC4.79□□□□□ -1.64
PHACTR3Q96KR7 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.79□□□□□ -1.64
PHACTR3Q96KR7 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC4.79□□□□□ -1.64
PHACTR3Q96KR7 SNORD39.3-201ENST00000584451 71 ntBASIC4.79□□□□□ -1.64
PHACTR3Q96KR7 AC097468.3-201ENST00000607956 456 ntBASIC4.79□□□□□ -1.64
PHACTR3Q96KR7 AC092954.2-201ENST00000609103 430 ntBASIC4.79□□□□□ -1.64
PHACTR3Q96KR7 AL359535.1-201ENST00000612100 1087 ntBASIC4.79□□□□□ -1.64
PHACTR3Q96KR7 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC4.79□□□□□ -1.64
PHACTR3Q96KR7 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC4.79□□□□□ -1.64
PHACTR3Q96KR7 AC091905.1-201ENST00000624400 311 ntBASIC4.79□□□□□ -1.64
PHACTR3Q96KR7 AC124864.2-201ENST00000624736 186 ntBASIC4.79□□□□□ -1.64
PHACTR3Q96KR7 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC4.79□□□□□ -1.64
PHACTR3Q96KR7 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PHACTR3Q96KR7 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PHACTR3Q96KR7 CR848007.1-201ENST00000442354 1699 ntBASIC4.79□□□□□ -1.64
PHACTR3Q96KR7 AC087190.4-201ENST00000574616 8334 ntBASIC4.79□□□□□ -1.64
PHACTR3Q96KR7 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PHACTR3Q96KR7 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
PHACTR3Q96KR7 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
PHACTR3Q96KR7 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.78□□□□□ -1.64
PHACTR3Q96KR7 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.78□□□□□ -1.64
PHACTR3Q96KR7 DCAF13P1-201ENST00000495256 1330 ntBASIC4.78□□□□□ -1.64
PHACTR3Q96KR7 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
PHACTR3Q96KR7 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
PHACTR3Q96KR7 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
PHACTR3Q96KR7 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
PHACTR3Q96KR7 AC007685.1-201ENST00000329806 452 ntBASIC4.78□□□□□ -1.64
PHACTR3Q96KR7 SNORA63.1-201ENST00000362493 131 ntBASIC4.78□□□□□ -1.64
PHACTR3Q96KR7 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
PHACTR3Q96KR7 PRRC2CP1-201ENST00000404428 159 ntBASIC4.78□□□□□ -1.64
PHACTR3Q96KR7 RNU2-28P-201ENST00000410457 189 ntBASIC4.78□□□□□ -1.64
PHACTR3Q96KR7 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC4.78□□□□□ -1.64
PHACTR3Q96KR7 USP9YP6-201ENST00000413550 854 ntBASIC4.78□□□□□ -1.64
PHACTR3Q96KR7 AC245052.5-201ENST00000416320 649 ntBASIC4.78□□□□□ -1.64
PHACTR3Q96KR7 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC4.78□□□□□ -1.64
PHACTR3Q96KR7 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC4.78□□□□□ -1.64
PHACTR3Q96KR7 AL513174.1-201ENST00000423182 629 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms