Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC3.36□□□□□ -1.87
USP47Q96K76 AP001086.1-201ENST00000494882 321 ntBASIC3.36□□□□□ -1.87
USP47Q96K76 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.36□□□□□ -1.87
USP47Q96K76 AC005921.1-201ENST00000510589 286 ntBASIC3.36□□□□□ -1.87
USP47Q96K76 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC3.36□□□□□ -1.87
USP47Q96K76 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.36□□□□□ -1.87
USP47Q96K76 OR5D17P-201ENST00000531492 978 ntBASIC3.36□□□□□ -1.87
USP47Q96K76 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.36□□□□□ -1.87
USP47Q96K76 MIR4648-201ENST00000580107 72 ntBASIC3.36□□□□□ -1.87
USP47Q96K76 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.36□□□□□ -1.87
USP47Q96K76 AL009028.1-201ENST00000604895 802 ntBASIC3.36□□□□□ -1.87
USP47Q96K76 AC007938.3-201ENST00000604965 623 ntBASIC3.36□□□□□ -1.87
USP47Q96K76 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.36□□□□□ -1.87
USP47Q96K76 AL109659.3-201ENST00000624985 950 ntBASIC3.36□□□□□ -1.87
USP47Q96K76 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
USP47Q96K76 AC011978.2-201ENST00000569835 2054 ntBASIC3.36□□□□□ -1.87
USP47Q96K76 MTND5P28-201ENST00000438005 1594 ntBASIC3.36□□□□□ -1.87
USP47Q96K76 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
USP47Q96K76 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.35□□□□□ -1.87
USP47Q96K76 AC006020.1-201ENST00000420179 1854 ntBASIC3.35□□□□□ -1.87
USP47Q96K76 AC092326.2-201ENST00000624772 1561 ntBASIC3.35□□□□□ -1.87
USP47Q96K76 RN7SKP223-201ENST00000410582 62 ntBASIC3.35□□□□□ -1.87
USP47Q96K76 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.35□□□□□ -1.87
USP47Q96K76 AC244098.2-201ENST00000422068 99 ntBASIC3.35□□□□□ -1.87
USP47Q96K76 AC093422.3-201ENST00000428506 305 ntBASIC3.35□□□□□ -1.87
USP47Q96K76 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC3.35□□□□□ -1.87
USP47Q96K76 AL139415.2-201ENST00000431968 163 ntBASIC3.35□□□□□ -1.87
USP47Q96K76 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC3.35□□□□□ -1.87
USP47Q96K76 FABP5P3-201ENST00000437960 408 ntBASIC3.35□□□□□ -1.87
USP47Q96K76 RNFT1P2-201ENST00000443064 757 ntBASIC3.35□□□□□ -1.87
USP47Q96K76 RPS26P30-201ENST00000443431 335 ntBASIC3.35□□□□□ -1.87
USP47Q96K76 ZNF736P6Y-201ENST00000447526 1213 ntBASIC3.35□□□□□ -1.87
USP47Q96K76 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
USP47Q96K76 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC3.35□□□□□ -1.87
USP47Q96K76 CFTRP1-201ENST00000456646 183 ntBASIC3.35□□□□□ -1.87
USP47Q96K76 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC3.35□□□□□ -1.87
USP47Q96K76 RN7SL636P-201ENST00000497504 294 ntBASIC3.35□□□□□ -1.87
USP47Q96K76 AC078918.1-201ENST00000498515 228 ntBASIC3.35□□□□□ -1.87
USP47Q96K76 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.35□□□□□ -1.87
USP47Q96K76 AC026436.1-201ENST00000510537 270 ntBASIC3.35□□□□□ -1.87
USP47Q96K76 AF279873.1-201ENST00000523393 313 ntBASIC3.35□□□□□ -1.87
USP47Q96K76 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC3.35□□□□□ -1.87
USP47Q96K76 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC3.35□□□□□ -1.87
USP47Q96K76 AC046143.2-201ENST00000609789 160 ntBASIC3.35□□□□□ -1.87
USP47Q96K76 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC3.35□□□□□ -1.87
USP47Q96K76 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC3.35□□□□□ -1.87
USP47Q96K76 AC092608.3-201ENST00000625017 386 ntBASIC3.35□□□□□ -1.87
USP47Q96K76 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC3.35□□□□□ -1.87
USP47Q96K76 AL356118.1-201ENST00000635272 1078 ntBASIC3.35□□□□□ -1.87
USP47Q96K76 MIR4278-201ENST00000636094 69 ntBASIC3.35□□□□□ -1.87
USP47Q96K76 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
USP47Q96K76 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.35□□□□□ -1.87
USP47Q96K76 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.35□□□□□ -1.87
USP47Q96K76 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC3.34□□□□□ -1.87
USP47Q96K76 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
USP47Q96K76 MAPK10-362ENST00000641864 4484 ntBASIC3.34□□□□□ -1.87
USP47Q96K76 FAM133CP-201ENST00000332869 704 ntBASIC3.34□□□□□ -1.88
USP47Q96K76 RNU2-37P-201ENST00000410695 177 ntBASIC3.34□□□□□ -1.88
USP47Q96K76 AC098826.1-201ENST00000433943 471 ntBASIC3.34□□□□□ -1.88
USP47Q96K76 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
USP47Q96K76 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC3.34□□□□□ -1.88
USP47Q96K76 RPL39P40-201ENST00000445481 146 ntBASIC3.34□□□□□ -1.88
USP47Q96K76 MTND1P33-201ENST00000446251 917 ntBASIC3.34□□□□□ -1.88
USP47Q96K76 AC015724.1-201ENST00000478577 156 ntBASIC3.34□□□□□ -1.88
USP47Q96K76 MTND5P21-201ENST00000531961 522 ntBASIC3.34□□□□□ -1.88
USP47Q96K76 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC3.34□□□□□ -1.88
USP47Q96K76 OR4H12P-201ENST00000556269 907 ntBASIC3.34□□□□□ -1.88
USP47Q96K76 MTCYBP28-201ENST00000566728 1132 ntBASIC3.34□□□□□ -1.88
USP47Q96K76 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.34□□□□□ -1.88
USP47Q96K76 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.34□□□□□ -1.88
USP47Q96K76 KC877982.1-201ENST00000602313 470 ntBASIC3.34□□□□□ -1.88
USP47Q96K76 KATNBL1P5-201ENST00000605015 517 ntBASIC3.34□□□□□ -1.88
USP47Q96K76 RMST_10.1-201ENST00000616309 154 ntBASIC3.34□□□□□ -1.88
USP47Q96K76 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC3.34□□□□□ -1.88
USP47Q96K76 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC3.34□□□□□ -1.88
USP47Q96K76 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.34□□□□□ -1.88
USP47Q96K76 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.88
USP47Q96K76 SEPT7P7-201ENST00000420492 1301 ntBASIC3.34□□□□□ -1.88
USP47Q96K76 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.34□□□□□ -1.88
USP47Q96K76 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.33□□□□□ -1.88
USP47Q96K76 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
USP47Q96K76 SNORA31-201ENST00000362607 130 ntBASIC3.33□□□□□ -1.88
USP47Q96K76 RNA5SP189-201ENST00000364920 115 ntBASIC3.33□□□□□ -1.88
USP47Q96K76 RNU6-650P-201ENST00000365658 111 ntBASIC3.33□□□□□ -1.88
USP47Q96K76 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
USP47Q96K76 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.33□□□□□ -1.88
USP47Q96K76 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC3.33□□□□□ -1.88
USP47Q96K76 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
USP47Q96K76 AC010468.3-201ENST00000508225 458 ntBASIC3.33□□□□□ -1.88
USP47Q96K76 AP003467.2-201ENST00000520175 319 ntBASIC3.33□□□□□ -1.88
USP47Q96K76 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC3.33□□□□□ -1.88
USP47Q96K76 AC021269.2-201ENST00000532318 330 ntBASIC3.33□□□□□ -1.88
USP47Q96K76 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC3.33□□□□□ -1.88
USP47Q96K76 AC009063.1-201ENST00000563342 702 ntBASIC3.33□□□□□ -1.88
USP47Q96K76 AC021851.1-201ENST00000608537 1082 ntBASIC3.33□□□□□ -1.88
USP47Q96K76 AC009159.1-201ENST00000618386 642 ntBASIC3.33□□□□□ -1.88
USP47Q96K76 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
USP47Q96K76 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.33□□□□□ -1.88
USP47Q96K76 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.33□□□□□ -1.88
USP47Q96K76 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms