Protein–RNA interactions for Protein: Q96JN2

CCDC136, Coiled-coil domain-containing protein 136, humanhuman

Predictions only

Length 1,154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC136Q96JN2 OR2A20P-203ENST00000498397 1268 ntBASIC4.81□□□□□ -1.64
CCDC136Q96JN2 KLHL2P1-201ENST00000508691 521 ntBASIC4.81□□□□□ -1.64
CCDC136Q96JN2 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC4.81□□□□□ -1.64
CCDC136Q96JN2 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC4.81□□□□□ -1.64
CCDC136Q96JN2 SNORA31.9-201ENST00000516429 84 ntBASIC4.81□□□□□ -1.64
CCDC136Q96JN2 NDUFA5P2-201ENST00000519723 344 ntBASIC4.81□□□□□ -1.64
CCDC136Q96JN2 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC4.81□□□□□ -1.64
CCDC136Q96JN2 AC007954.1-201ENST00000554198 494 ntBASIC4.81□□□□□ -1.64
CCDC136Q96JN2 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC4.81□□□□□ -1.64
CCDC136Q96JN2 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC4.81□□□□□ -1.64
CCDC136Q96JN2 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC4.81□□□□□ -1.64
CCDC136Q96JN2 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC136Q96JN2 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC136Q96JN2 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC136Q96JN2 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC136Q96JN2 RNU6-500P-201ENST00000362349 107 ntBASIC4.8□□□□□ -1.64
CCDC136Q96JN2 RNU6-553P-201ENST00000364047 96 ntBASIC4.8□□□□□ -1.64
CCDC136Q96JN2 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC136Q96JN2 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC4.8□□□□□ -1.64
CCDC136Q96JN2 HMGB3P23-201ENST00000414981 585 ntBASIC4.8□□□□□ -1.64
CCDC136Q96JN2 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC4.8□□□□□ -1.64
CCDC136Q96JN2 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.8□□□□□ -1.64
CCDC136Q96JN2 AL691449.1-201ENST00000426570 421 ntBASIC4.8□□□□□ -1.64
CCDC136Q96JN2 AL590103.1-201ENST00000434488 307 ntBASIC4.8□□□□□ -1.64
CCDC136Q96JN2 NDUFB1P1-201ENST00000435191 180 ntBASIC4.8□□□□□ -1.64
CCDC136Q96JN2 MTCYBP39-201ENST00000437562 491 ntBASIC4.8□□□□□ -1.64
CCDC136Q96JN2 AL445567.1-201ENST00000439121 144 ntBASIC4.8□□□□□ -1.64
CCDC136Q96JN2 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC4.8□□□□□ -1.64
CCDC136Q96JN2 AC010655.1-201ENST00000449336 292 ntBASIC4.8□□□□□ -1.64
CCDC136Q96JN2 AC104308.1-201ENST00000454621 333 ntBASIC4.8□□□□□ -1.64
CCDC136Q96JN2 AC091564.1-201ENST00000464563 479 ntBASIC4.8□□□□□ -1.64
CCDC136Q96JN2 AL024509.2-201ENST00000493462 493 ntBASIC4.8□□□□□ -1.64
CCDC136Q96JN2 AC106872.3-201ENST00000495104 446 ntBASIC4.8□□□□□ -1.64
CCDC136Q96JN2 AC112198.1-201ENST00000505369 1220 ntBASIC4.8□□□□□ -1.64
CCDC136Q96JN2 MLLT10P2-201ENST00000506434 249 ntBASIC4.8□□□□□ -1.64
CCDC136Q96JN2 HMGB3P15-201ENST00000507326 574 ntBASIC4.8□□□□□ -1.64
CCDC136Q96JN2 POU5F1P7-201ENST00000508759 541 ntBASIC4.8□□□□□ -1.64
CCDC136Q96JN2 AC002456.2-201ENST00000509356 380 ntBASIC4.8□□□□□ -1.64
CCDC136Q96JN2 RNU6-528P-201ENST00000516926 100 ntBASIC4.8□□□□□ -1.64
CCDC136Q96JN2 AP003497.1-201ENST00000528472 562 ntBASIC4.8□□□□□ -1.64
CCDC136Q96JN2 AP004247.1-201ENST00000531556 1289 ntBASIC4.8□□□□□ -1.64
CCDC136Q96JN2 FAM60BP-201ENST00000578364 658 ntBASIC4.8□□□□□ -1.64
CCDC136Q96JN2 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC4.8□□□□□ -1.64
CCDC136Q96JN2 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC4.8□□□□□ -1.64
CCDC136Q96JN2 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC4.8□□□□□ -1.64
CCDC136Q96JN2 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC4.8□□□□□ -1.64
CCDC136Q96JN2 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC4.8□□□□□ -1.64
CCDC136Q96JN2 CLIC4P2-201ENST00000601934 717 ntBASIC4.8□□□□□ -1.64
CCDC136Q96JN2 AC025811.1-201ENST00000604312 472 ntBASIC4.8□□□□□ -1.64
CCDC136Q96JN2 AP001330.4-201ENST00000604350 154 ntBASIC4.8□□□□□ -1.64
CCDC136Q96JN2 AL022099.1-201ENST00000604551 712 ntBASIC4.8□□□□□ -1.64
CCDC136Q96JN2 TUG1_1.1-201ENST00000610654 145 ntBASIC4.8□□□□□ -1.64
CCDC136Q96JN2 AL590240.3-201ENST00000621416 943 ntBASIC4.8□□□□□ -1.64
CCDC136Q96JN2 AC022079.1-201ENST00000621546 602 ntBASIC4.8□□□□□ -1.64
CCDC136Q96JN2 AL360181.4-201ENST00000621752 134 ntBASIC4.8□□□□□ -1.64
CCDC136Q96JN2 AF246928.1-201ENST00000623768 87 ntBASIC4.8□□□□□ -1.64
CCDC136Q96JN2 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.8□□□□□ -1.64
CCDC136Q96JN2 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC4.8□□□□□ -1.64
CCDC136Q96JN2 AC092447.10-201ENST00000620607 1652 ntBASIC4.8□□□□□ -1.64
CCDC136Q96JN2 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CCDC136Q96JN2 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CCDC136Q96JN2 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CCDC136Q96JN2 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
CCDC136Q96JN2 RPS3AP26-201ENST00000398259 784 ntBASIC4.79□□□□□ -1.64
CCDC136Q96JN2 RNU4-6P-201ENST00000410804 122 ntBASIC4.79□□□□□ -1.64
CCDC136Q96JN2 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC4.79□□□□□ -1.64
CCDC136Q96JN2 RPL23AP39-201ENST00000415533 405 ntBASIC4.79□□□□□ -1.64
CCDC136Q96JN2 AL365203.2-201ENST00000423444 196 ntBASIC4.79□□□□□ -1.64
CCDC136Q96JN2 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC4.79□□□□□ -1.64
CCDC136Q96JN2 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC4.79□□□□□ -1.64
CCDC136Q96JN2 OR4K11P-201ENST00000431829 904 ntBASIC4.79□□□□□ -1.64
CCDC136Q96JN2 AL831737.1-201ENST00000441288 271 ntBASIC4.79□□□□□ -1.64
CCDC136Q96JN2 RAC1P7-201ENST00000445367 377 ntBASIC4.79□□□□□ -1.64
CCDC136Q96JN2 ZNF736P5Y-201ENST00000451173 805 ntBASIC4.79□□□□□ -1.64
CCDC136Q96JN2 OR6K1P-201ENST00000456766 971 ntBASIC4.79□□□□□ -1.64
CCDC136Q96JN2 RPS3AP43-201ENST00000479743 781 ntBASIC4.79□□□□□ -1.64
CCDC136Q96JN2 AC021382.1-201ENST00000483523 359 ntBASIC4.79□□□□□ -1.64
CCDC136Q96JN2 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC4.79□□□□□ -1.64
CCDC136Q96JN2 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC4.79□□□□□ -1.64
CCDC136Q96JN2 AC005178.1-201ENST00000508392 440 ntBASIC4.79□□□□□ -1.64
CCDC136Q96JN2 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC4.79□□□□□ -1.64
CCDC136Q96JN2 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.79□□□□□ -1.64
CCDC136Q96JN2 SNRPGP16-201ENST00000533275 226 ntBASIC4.79□□□□□ -1.64
CCDC136Q96JN2 PARP1P2-201ENST00000556806 195 ntBASIC4.79□□□□□ -1.64
CCDC136Q96JN2 AC037471.2-201ENST00000564941 598 ntBASIC4.79□□□□□ -1.64
CCDC136Q96JN2 AC135628.1-201ENST00000568867 534 ntBASIC4.79□□□□□ -1.64
CCDC136Q96JN2 SNORD84-203ENST00000584275 78 ntBASIC4.79□□□□□ -1.64
CCDC136Q96JN2 AC002550.2-201ENST00000621246 394 ntBASIC4.79□□□□□ -1.64
CCDC136Q96JN2 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC4.79□□□□□ -1.64
CCDC136Q96JN2 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
CCDC136Q96JN2 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC4.79□□□□□ -1.64
CCDC136Q96JN2 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC4.79□□□□□ -1.64
CCDC136Q96JN2 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
CCDC136Q96JN2 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC4.78□□□□□ -1.64
CCDC136Q96JN2 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.78□□□□□ -1.64
CCDC136Q96JN2 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
CCDC136Q96JN2 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.78□□□□□ -1.64
CCDC136Q96JN2 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CCDC136Q96JN2 SNORA70.2-201ENST00000364506 135 ntBASIC4.78□□□□□ -1.64
CCDC136Q96JN2 ESD-201ENST00000378697 1079 ntTSL 5 BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 116.4 ms