Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 PRPF19P1-201ENST00000584766 898 ntBASIC5.65□□□□□ -1.5
TRIM11Q96F44 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC5.65□□□□□ -1.5
TRIM11Q96F44 HMGB2P1-201ENST00000591146 634 ntBASIC5.65□□□□□ -1.5
TRIM11Q96F44 AC009779.6-201ENST00000603972 165 ntBASIC5.65□□□□□ -1.5
TRIM11Q96F44 AC023813.4-201ENST00000607580 580 ntBASIC5.65□□□□□ -1.5
TRIM11Q96F44 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC5.65□□□□□ -1.5
TRIM11Q96F44 AL731566.2-201ENST00000618971 317 ntBASIC5.65□□□□□ -1.5
TRIM11Q96F44 AC103705.1-201ENST00000619013 241 ntBASIC5.65□□□□□ -1.5
TRIM11Q96F44 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC5.65□□□□□ -1.5
TRIM11Q96F44 MIR1910-201ENST00000636955 80 ntBASIC5.65□□□□□ -1.5
TRIM11Q96F44 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC5.65□□□□□ -1.5
TRIM11Q96F44 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
TRIM11Q96F44 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
TRIM11Q96F44 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
TRIM11Q96F44 TRIM51GP-201ENST00000534741 1350 ntBASIC5.65□□□□□ -1.51
TRIM11Q96F44 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
TRIM11Q96F44 AC104623.2-202ENST00000623477 4002 ntBASIC5.64□□□□□ -1.51
TRIM11Q96F44 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
TRIM11Q96F44 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
TRIM11Q96F44 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
TRIM11Q96F44 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
TRIM11Q96F44 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC5.64□□□□□ -1.51
TRIM11Q96F44 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.64□□□□□ -1.51
TRIM11Q96F44 MTCO1P24-201ENST00000515438 1558 ntBASIC5.64□□□□□ -1.51
TRIM11Q96F44 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.64□□□□□ -1.51
TRIM11Q96F44 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
TRIM11Q96F44 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
TRIM11Q96F44 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
TRIM11Q96F44 U3.11-201ENST00000364476 212 ntBASIC5.64□□□□□ -1.51
TRIM11Q96F44 SNORD14.1-201ENST00000365609 90 ntBASIC5.64□□□□□ -1.51
TRIM11Q96F44 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC5.64□□□□□ -1.51
TRIM11Q96F44 RNU6-444P-201ENST00000383988 108 ntBASIC5.64□□□□□ -1.51
TRIM11Q96F44 Y_RNA.464-201ENST00000384282 110 ntBASIC5.64□□□□□ -1.51
TRIM11Q96F44 SNORA16A-201ENST00000384342 137 ntBASIC5.64□□□□□ -1.51
TRIM11Q96F44 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
TRIM11Q96F44 U3.25-201ENST00000391209 220 ntBASIC5.64□□□□□ -1.51
TRIM11Q96F44 DSTNP4-201ENST00000399472 474 ntBASIC5.64□□□□□ -1.51
TRIM11Q96F44 MIR450B-201ENST00000401182 78 ntBASIC5.64□□□□□ -1.51
TRIM11Q96F44 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC5.64□□□□□ -1.51
TRIM11Q96F44 COX5BP7-201ENST00000414780 274 ntBASIC5.64□□□□□ -1.51
TRIM11Q96F44 GJA6P-201ENST00000415117 1042 ntBASIC5.64□□□□□ -1.51
TRIM11Q96F44 USMG5P1-201ENST00000425964 177 ntBASIC5.64□□□□□ -1.51
TRIM11Q96F44 GAPDHP58-201ENST00000438477 1006 ntBASIC5.64□□□□□ -1.51
TRIM11Q96F44 RPL23AP43-201ENST00000446445 471 ntBASIC5.64□□□□□ -1.51
TRIM11Q96F44 FTH1P25-201ENST00000447665 469 ntBASIC5.64□□□□□ -1.51
TRIM11Q96F44 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.64□□□□□ -1.51
TRIM11Q96F44 MTCO3P2-201ENST00000457365 171 ntBASIC5.64□□□□□ -1.51
TRIM11Q96F44 RPS3AP41-201ENST00000462701 778 ntBASIC5.64□□□□□ -1.51
TRIM11Q96F44 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC5.64□□□□□ -1.51
TRIM11Q96F44 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC5.64□□□□□ -1.51
TRIM11Q96F44 AC108471.1-201ENST00000513977 287 ntBASIC5.64□□□□□ -1.51
TRIM11Q96F44 IGKV2-36-201ENST00000519999 223 ntBASIC5.64□□□□□ -1.51
TRIM11Q96F44 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC5.64□□□□□ -1.51
TRIM11Q96F44 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
TRIM11Q96F44 AL359219.2-201ENST00000555184 348 ntBASIC5.64□□□□□ -1.51
TRIM11Q96F44 SULT1C2P2-201ENST00000562517 294 ntBASIC5.64□□□□□ -1.51
TRIM11Q96F44 AC022884.3-201ENST00000579571 248 ntBASIC5.64□□□□□ -1.51
TRIM11Q96F44 MIR4660-201ENST00000583549 74 ntBASIC5.64□□□□□ -1.51
TRIM11Q96F44 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.64□□□□□ -1.51
TRIM11Q96F44 FO393422.1-201ENST00000603908 708 ntBASIC5.64□□□□□ -1.51
TRIM11Q96F44 AC133644.2-201ENST00000608142 540 ntBASIC5.64□□□□□ -1.51
TRIM11Q96F44 AL031666.3-201ENST00000609320 1006 ntBASIC5.64□□□□□ -1.51
TRIM11Q96F44 AC004792.1-201ENST00000614523 137 ntBASIC5.64□□□□□ -1.51
TRIM11Q96F44 SDR42E1P2-201ENST00000614861 481 ntBASIC5.64□□□□□ -1.51
TRIM11Q96F44 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.64□□□□□ -1.51
TRIM11Q96F44 SDR42E1P4-201ENST00000620894 481 ntBASIC5.64□□□□□ -1.51
TRIM11Q96F44 AL691477.1-201ENST00000624398 162 ntBASIC5.64□□□□□ -1.51
TRIM11Q96F44 U6.114-201ENST00000636407 96 ntBASIC5.64□□□□□ -1.51
TRIM11Q96F44 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
TRIM11Q96F44 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
TRIM11Q96F44 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
TRIM11Q96F44 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
TRIM11Q96F44 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC5.64□□□□□ -1.51
TRIM11Q96F44 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC5.64□□□□□ -1.51
TRIM11Q96F44 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
TRIM11Q96F44 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
TRIM11Q96F44 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC5.63□□□□□ -1.51
TRIM11Q96F44 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.63□□□□□ -1.51
TRIM11Q96F44 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
TRIM11Q96F44 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
TRIM11Q96F44 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
TRIM11Q96F44 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
TRIM11Q96F44 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
TRIM11Q96F44 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
TRIM11Q96F44 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.63□□□□□ -1.51
TRIM11Q96F44 Y_RNA.473-201ENST00000384333 102 ntBASIC5.63□□□□□ -1.51
TRIM11Q96F44 AL359643.1-201ENST00000404109 423 ntBASIC5.63□□□□□ -1.51
TRIM11Q96F44 RN7SKP286-201ENST00000410894 299 ntBASIC5.63□□□□□ -1.51
TRIM11Q96F44 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.63□□□□□ -1.51
TRIM11Q96F44 TMSB4XP3-201ENST00000445144 114 ntBASIC5.63□□□□□ -1.51
TRIM11Q96F44 RPL36AP39-201ENST00000445859 318 ntBASIC5.63□□□□□ -1.51
TRIM11Q96F44 RPL7L1P1-201ENST00000448259 785 ntBASIC5.63□□□□□ -1.51
TRIM11Q96F44 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC5.63□□□□□ -1.51
TRIM11Q96F44 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.63□□□□□ -1.51
TRIM11Q96F44 AC133473.1-201ENST00000455173 299 ntBASIC5.63□□□□□ -1.51
TRIM11Q96F44 RN7SL515P-201ENST00000463999 297 ntBASIC5.63□□□□□ -1.51
TRIM11Q96F44 RN7SL814P-201ENST00000487715 300 ntBASIC5.63□□□□□ -1.51
TRIM11Q96F44 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC5.63□□□□□ -1.51
TRIM11Q96F44 RN7SL447P-201ENST00000494711 245 ntBASIC5.63□□□□□ -1.51
TRIM11Q96F44 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms