Protein–RNA interactions for Protein: Q96BD8

SKA1, Spindle and kinetochore-associated protein 1, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1Q96BD8 AC090774.1-201ENST00000435925 246 ntBASIC4□□□□□ -1.77
SKA1Q96BD8 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC4□□□□□ -1.77
SKA1Q96BD8 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC4□□□□□ -1.77
SKA1Q96BD8 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC4□□□□□ -1.77
SKA1Q96BD8 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC4□□□□□ -1.77
SKA1Q96BD8 RPL21P11-201ENST00000461458 483 ntBASIC4□□□□□ -1.77
SKA1Q96BD8 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC4□□□□□ -1.77
SKA1Q96BD8 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC4□□□□□ -1.77
SKA1Q96BD8 RNU7-143P-201ENST00000516781 65 ntBASIC4□□□□□ -1.77
SKA1Q96BD8 RPL12P22-201ENST00000519073 490 ntBASIC4□□□□□ -1.77
SKA1Q96BD8 AP003497.1-201ENST00000528472 562 ntBASIC4□□□□□ -1.77
SKA1Q96BD8 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
SKA1Q96BD8 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC4□□□□□ -1.77
SKA1Q96BD8 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC4□□□□□ -1.77
SKA1Q96BD8 AC125611.2-201ENST00000551907 647 ntBASIC4□□□□□ -1.77
SKA1Q96BD8 MIR6868-201ENST00000611215 58 ntBASIC4□□□□□ -1.77
SKA1Q96BD8 AL139418.1-201ENST00000613613 177 ntBASIC4□□□□□ -1.77
SKA1Q96BD8 AC006111.3-201ENST00000622137 383 ntBASIC4□□□□□ -1.77
SKA1Q96BD8 AC079597.1-201ENST00000624306 508 ntBASIC4□□□□□ -1.77
SKA1Q96BD8 AC244205.2-202ENST00000635781 342 ntBASIC4□□□□□ -1.77
SKA1Q96BD8 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC4□□□□□ -1.77
SKA1Q96BD8 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SKA1Q96BD8 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4□□□□□ -1.77
SKA1Q96BD8 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4□□□□□ -1.77
SKA1Q96BD8 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.99□□□□□ -1.77
SKA1Q96BD8 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SKA1Q96BD8 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SKA1Q96BD8 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC3.99□□□□□ -1.77
SKA1Q96BD8 RPL21P132-201ENST00000331267 462 ntBASIC3.99□□□□□ -1.77
SKA1Q96BD8 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.99□□□□□ -1.77
SKA1Q96BD8 RNU6-637P-201ENST00000384050 107 ntBASIC3.99□□□□□ -1.77
SKA1Q96BD8 Y_RNA.548-201ENST00000384656 105 ntBASIC3.99□□□□□ -1.77
SKA1Q96BD8 RNU6-253P-201ENST00000384730 105 ntBASIC3.99□□□□□ -1.77
SKA1Q96BD8 SNORA3.3-201ENST00000408712 125 ntBASIC3.99□□□□□ -1.77
SKA1Q96BD8 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.99□□□□□ -1.77
SKA1Q96BD8 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.99□□□□□ -1.77
SKA1Q96BD8 MTCO2P17-201ENST00000424336 677 ntBASIC3.99□□□□□ -1.77
SKA1Q96BD8 KCTD9P3-201ENST00000434597 1169 ntBASIC3.99□□□□□ -1.77
SKA1Q96BD8 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.99□□□□□ -1.77
SKA1Q96BD8 AL354941.1-201ENST00000438600 464 ntBASIC3.99□□□□□ -1.77
SKA1Q96BD8 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
SKA1Q96BD8 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.99□□□□□ -1.77
SKA1Q96BD8 AL049714.1-201ENST00000466686 347 ntBASIC3.99□□□□□ -1.77
SKA1Q96BD8 AC106872.3-201ENST00000495104 446 ntBASIC3.99□□□□□ -1.77
SKA1Q96BD8 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.99□□□□□ -1.77
SKA1Q96BD8 AC109464.2-201ENST00000510242 943 ntBASIC3.99□□□□□ -1.77
SKA1Q96BD8 AC026726.1-201ENST00000512859 601 ntBASIC3.99□□□□□ -1.77
SKA1Q96BD8 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
SKA1Q96BD8 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SKA1Q96BD8 ERP27-202ENST00000540097 993 ntTSL 2 BASIC3.99□□□□□ -1.77
SKA1Q96BD8 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3.99□□□□□ -1.77
SKA1Q96BD8 UBE2NP1-201ENST00000545592 458 ntBASIC3.99□□□□□ -1.77
SKA1Q96BD8 AC022968.1-201ENST00000567372 442 ntBASIC3.99□□□□□ -1.77
SKA1Q96BD8 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC3.99□□□□□ -1.77
SKA1Q96BD8 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.99□□□□□ -1.77
SKA1Q96BD8 AC011260.1-201ENST00000578420 472 ntBASIC3.99□□□□□ -1.77
SKA1Q96BD8 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.99□□□□□ -1.77
SKA1Q96BD8 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC3.99□□□□□ -1.77
SKA1Q96BD8 AC004067.1-201ENST00000608733 700 ntBASIC3.99□□□□□ -1.77
SKA1Q96BD8 AP000254.1-201ENST00000609934 520 ntBASIC3.99□□□□□ -1.77
SKA1Q96BD8 MIR6076-201ENST00000617521 113 ntBASIC3.99□□□□□ -1.77
SKA1Q96BD8 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
SKA1Q96BD8 AC244258.1-201ENST00000637553 1071 ntBASIC3.99□□□□□ -1.77
SKA1Q96BD8 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SKA1Q96BD8 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SKA1Q96BD8 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.99□□□□□ -1.77
SKA1Q96BD8 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.99□□□□□ -1.77
SKA1Q96BD8 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SKA1Q96BD8 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SKA1Q96BD8 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SKA1Q96BD8 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SKA1Q96BD8 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.98□□□□□ -1.77
SKA1Q96BD8 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SKA1Q96BD8 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.98□□□□□ -1.77
SKA1Q96BD8 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SKA1Q96BD8 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SKA1Q96BD8 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.98□□□□□ -1.77
SKA1Q96BD8 AL672167.1-206ENST00000356293 943 ntBASIC3.98□□□□□ -1.77
SKA1Q96BD8 RNU6-853P-201ENST00000364306 107 ntBASIC3.98□□□□□ -1.77
SKA1Q96BD8 RNA5SP88-201ENST00000365560 109 ntBASIC3.98□□□□□ -1.77
SKA1Q96BD8 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.98□□□□□ -1.77
SKA1Q96BD8 SNORA1.3-201ENST00000384676 136 ntBASIC3.98□□□□□ -1.77
SKA1Q96BD8 U3.20-201ENST00000390909 217 ntBASIC3.98□□□□□ -1.77
SKA1Q96BD8 MIR1251-201ENST00000408552 70 ntBASIC3.98□□□□□ -1.77
SKA1Q96BD8 MTND1P21-201ENST00000412991 285 ntBASIC3.98□□□□□ -1.77
SKA1Q96BD8 YWHAZP7-201ENST00000436906 631 ntBASIC3.98□□□□□ -1.77
SKA1Q96BD8 TXNP1-201ENST00000441872 371 ntBASIC3.98□□□□□ -1.77
SKA1Q96BD8 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.98□□□□□ -1.77
SKA1Q96BD8 AL591719.1-201ENST00000444669 744 ntBASIC3.98□□□□□ -1.77
SKA1Q96BD8 AL109741.2-201ENST00000455561 343 ntBASIC3.98□□□□□ -1.77
SKA1Q96BD8 AL049830.2-201ENST00000480072 201 ntBASIC3.98□□□□□ -1.77
SKA1Q96BD8 SNORA3.4-201ENST00000515969 96 ntBASIC3.98□□□□□ -1.77
SKA1Q96BD8 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC3.98□□□□□ -1.77
SKA1Q96BD8 AC008489.1-201ENST00000524271 483 ntBASIC3.98□□□□□ -1.77
SKA1Q96BD8 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.98□□□□□ -1.77
SKA1Q96BD8 AP003461.1-201ENST00000528866 78 ntBASIC3.98□□□□□ -1.77
SKA1Q96BD8 AC068587.4-201ENST00000533893 186 ntBASIC3.98□□□□□ -1.77
SKA1Q96BD8 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.98□□□□□ -1.77
SKA1Q96BD8 AC136618.2-201ENST00000575091 400 ntBASIC3.98□□□□□ -1.77
SKA1Q96BD8 MIR5047-201ENST00000579212 100 ntBASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms