Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 RPS23P10-201ENST00000416185 486 ntBASIC5.7□□□□□ -1.5
HPS1Q92902 THEM7P-201ENST00000419556 672 ntBASIC5.7□□□□□ -1.5
HPS1Q92902 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC5.7□□□□□ -1.5
HPS1Q92902 TRAPPC2P5-201ENST00000426293 308 ntBASIC5.7□□□□□ -1.5
HPS1Q92902 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC5.7□□□□□ -1.5
HPS1Q92902 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC5.7□□□□□ -1.5
HPS1Q92902 PFN1P11-201ENST00000445829 389 ntBASIC5.7□□□□□ -1.5
HPS1Q92902 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC5.7□□□□□ -1.5
HPS1Q92902 RPL21P41-201ENST00000459863 264 ntBASIC5.7□□□□□ -1.5
HPS1Q92902 HMGB1P25-201ENST00000468402 607 ntBASIC5.7□□□□□ -1.5
HPS1Q92902 RPS18P6-201ENST00000476880 458 ntBASIC5.7□□□□□ -1.5
HPS1Q92902 AC010409.1-201ENST00000487382 476 ntBASIC5.7□□□□□ -1.5
HPS1Q92902 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
HPS1Q92902 AL390198.2-201ENST00000510553 222 ntBASIC5.7□□□□□ -1.5
HPS1Q92902 AC016065.2-201ENST00000514530 444 ntBASIC5.7□□□□□ -1.5
HPS1Q92902 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC5.7□□□□□ -1.5
HPS1Q92902 MIR2355-201ENST00000517199 87 ntBASIC5.7□□□□□ -1.5
HPS1Q92902 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.7□□□□□ -1.5
HPS1Q92902 CTSLP2-201ENST00000580501 394 ntBASIC5.7□□□□□ -1.5
HPS1Q92902 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC5.7□□□□□ -1.5
HPS1Q92902 BDH2P1-201ENST00000602288 736 ntBASIC5.7□□□□□ -1.5
HPS1Q92902 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC5.7□□□□□ -1.5
HPS1Q92902 AL031601.2-202ENST00000622650 282 ntBASIC5.7□□□□□ -1.5
HPS1Q92902 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC5.7□□□□□ -1.5
HPS1Q92902 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.7□□□□□ -1.5
HPS1Q92902 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.7□□□□□ -1.5
HPS1Q92902 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
HPS1Q92902 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
HPS1Q92902 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC5.7□□□□□ -1.5
HPS1Q92902 AC009951.1-201ENST00000623674 2614 ntBASIC5.7□□□□□ -1.5
HPS1Q92902 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
HPS1Q92902 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HPS1Q92902 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.7□□□□□ -1.5
HPS1Q92902 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
HPS1Q92902 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HPS1Q92902 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HPS1Q92902 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HPS1Q92902 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
HPS1Q92902 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
HPS1Q92902 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HPS1Q92902 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HPS1Q92902 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.69□□□□□ -1.5
HPS1Q92902 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HPS1Q92902 FANCD2P2-201ENST00000437591 1400 ntBASIC5.69□□□□□ -1.5
HPS1Q92902 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HPS1Q92902 MIR323B-201ENST00000385269 82 ntBASIC5.69□□□□□ -1.5
HPS1Q92902 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
HPS1Q92902 RNU2-52P-201ENST00000410680 190 ntBASIC5.69□□□□□ -1.5
HPS1Q92902 AC092809.3-201ENST00000415453 231 ntBASIC5.69□□□□□ -1.5
HPS1Q92902 AC092573.2-201ENST00000434546 243 ntBASIC5.69□□□□□ -1.5
HPS1Q92902 TIMM8BP2-201ENST00000445940 251 ntBASIC5.69□□□□□ -1.5
HPS1Q92902 RPL23AP28-201ENST00000448062 470 ntBASIC5.69□□□□□ -1.5
HPS1Q92902 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HPS1Q92902 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HPS1Q92902 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.69□□□□□ -1.5
HPS1Q92902 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC5.69□□□□□ -1.5
HPS1Q92902 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC5.69□□□□□ -1.5
HPS1Q92902 AC140063.1-201ENST00000541343 259 ntBASIC5.69□□□□□ -1.5
HPS1Q92902 AC006512.2-201ENST00000543250 486 ntBASIC5.69□□□□□ -1.5
HPS1Q92902 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.69□□□□□ -1.5
HPS1Q92902 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC5.69□□□□□ -1.5
HPS1Q92902 MIR4308-201ENST00000580634 81 ntBASIC5.69□□□□□ -1.5
HPS1Q92902 RN7SL230P-201ENST00000580835 303 ntBASIC5.69□□□□□ -1.5
HPS1Q92902 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC5.69□□□□□ -1.5
HPS1Q92902 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC5.69□□□□□ -1.5
HPS1Q92902 AC037487.3-201ENST00000606668 112 ntBASIC5.69□□□□□ -1.5
HPS1Q92902 AC004241.2-201ENST00000614562 444 ntBASIC5.69□□□□□ -1.5
HPS1Q92902 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC5.69□□□□□ -1.5
HPS1Q92902 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HPS1Q92902 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HPS1Q92902 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC5.69□□□□□ -1.5
HPS1Q92902 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
HPS1Q92902 SMG1P5-202ENST00000529428 4219 ntBASIC5.69□□□□□ -1.5
HPS1Q92902 SMG1P2-201ENST00000566127 4221 ntBASIC5.69□□□□□ -1.5
HPS1Q92902 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
HPS1Q92902 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HPS1Q92902 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HPS1Q92902 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.68□□□□□ -1.5
HPS1Q92902 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
HPS1Q92902 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
HPS1Q92902 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HPS1Q92902 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC5.68□□□□□ -1.5
HPS1Q92902 Y_RNA.358-201ENST00000365491 99 ntBASIC5.68□□□□□ -1.5
HPS1Q92902 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
HPS1Q92902 MIR190B-201ENST00000401119 79 ntBASIC5.68□□□□□ -1.5
HPS1Q92902 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC5.68□□□□□ -1.5
HPS1Q92902 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.68□□□□□ -1.5
HPS1Q92902 AL645939.3-201ENST00000435408 225 ntBASIC5.68□□□□□ -1.5
HPS1Q92902 Z95327.1-201ENST00000446082 482 ntBASIC5.68□□□□□ -1.5
HPS1Q92902 Z92846.1-201ENST00000456203 268 ntBASIC5.68□□□□□ -1.5
HPS1Q92902 AC104164.1-201ENST00000460282 590 ntBASIC5.68□□□□□ -1.5
HPS1Q92902 AC008481.1-201ENST00000463278 396 ntBASIC5.68□□□□□ -1.5
HPS1Q92902 AC007998.1-201ENST00000474156 672 ntBASIC5.68□□□□□ -1.5
HPS1Q92902 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC5.68□□□□□ -1.5
HPS1Q92902 AC097462.2-201ENST00000504623 481 ntBASIC5.68□□□□□ -1.5
HPS1Q92902 RNU6-426P-201ENST00000516464 97 ntBASIC5.68□□□□□ -1.5
HPS1Q92902 RNU6-1012P-201ENST00000516606 109 ntBASIC5.68□□□□□ -1.5
HPS1Q92902 RNU6-677P-201ENST00000516914 101 ntBASIC5.68□□□□□ -1.5
HPS1Q92902 RNU4ATAC10P-201ENST00000516967 122 ntBASIC5.68□□□□□ -1.5
HPS1Q92902 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms