Protein–RNA interactions for Protein: Q8TE82

SH3TC1, SH3 domain and tetratricopeptide repeat-containing protein 1, humanhuman

Predictions only

Length 1,336 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1Q8TE82 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SH3TC1Q8TE82 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.36□□□□□ -1.87
SH3TC1Q8TE82 SNORA51.4-201ENST00000364993 124 ntBASIC3.36□□□□□ -1.87
SH3TC1Q8TE82 RNU6-354P-201ENST00000383862 107 ntBASIC3.36□□□□□ -1.87
SH3TC1Q8TE82 RNU6-610P-201ENST00000384264 107 ntBASIC3.36□□□□□ -1.87
SH3TC1Q8TE82 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
SH3TC1Q8TE82 RNA5SP344-201ENST00000411081 104 ntBASIC3.36□□□□□ -1.87
SH3TC1Q8TE82 TRIM60P5Y-201ENST00000413946 574 ntBASIC3.36□□□□□ -1.87
SH3TC1Q8TE82 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.36□□□□□ -1.87
SH3TC1Q8TE82 AC005517.2-201ENST00000424673 553 ntBASIC3.36□□□□□ -1.87
SH3TC1Q8TE82 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.36□□□□□ -1.87
SH3TC1Q8TE82 AL096829.2-201ENST00000446582 742 ntBASIC3.36□□□□□ -1.87
SH3TC1Q8TE82 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.36□□□□□ -1.87
SH3TC1Q8TE82 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC3.36□□□□□ -1.87
SH3TC1Q8TE82 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC3.36□□□□□ -1.87
SH3TC1Q8TE82 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.36□□□□□ -1.87
SH3TC1Q8TE82 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.36□□□□□ -1.87
SH3TC1Q8TE82 RNA5SP148-201ENST00000516527 94 ntBASIC3.36□□□□□ -1.87
SH3TC1Q8TE82 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC3.36□□□□□ -1.87
SH3TC1Q8TE82 MTND1P36-201ENST00000522384 936 ntBASIC3.36□□□□□ -1.87
SH3TC1Q8TE82 AF279873.1-201ENST00000523393 313 ntBASIC3.36□□□□□ -1.87
SH3TC1Q8TE82 AP001207.1-201ENST00000524051 481 ntBASIC3.36□□□□□ -1.87
SH3TC1Q8TE82 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.36□□□□□ -1.87
SH3TC1Q8TE82 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.36□□□□□ -1.87
SH3TC1Q8TE82 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC3.36□□□□□ -1.87
SH3TC1Q8TE82 MIR4789-201ENST00000577469 82 ntBASIC3.36□□□□□ -1.87
SH3TC1Q8TE82 AC124283.4-201ENST00000581815 456 ntBASIC3.36□□□□□ -1.87
SH3TC1Q8TE82 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.36□□□□□ -1.87
SH3TC1Q8TE82 AC084035.1-201ENST00000634543 607 ntBASIC3.36□□□□□ -1.87
SH3TC1Q8TE82 AL356118.1-201ENST00000635272 1078 ntBASIC3.36□□□□□ -1.87
SH3TC1Q8TE82 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC3.36□□□□□ -1.87
SH3TC1Q8TE82 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SH3TC1Q8TE82 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SH3TC1Q8TE82 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SH3TC1Q8TE82 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
SH3TC1Q8TE82 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
SH3TC1Q8TE82 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
SH3TC1Q8TE82 AC073055.1-201ENST00000456901 1621 ntBASIC3.35□□□□□ -1.87
SH3TC1Q8TE82 SNORA63.3-201ENST00000362682 132 ntBASIC3.35□□□□□ -1.87
SH3TC1Q8TE82 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
SH3TC1Q8TE82 RPL22P22-201ENST00000395439 379 ntBASIC3.35□□□□□ -1.87
SH3TC1Q8TE82 MIR887-201ENST00000401258 79 ntBASIC3.35□□□□□ -1.87
SH3TC1Q8TE82 RNU6-77P-201ENST00000410554 91 ntBASIC3.35□□□□□ -1.87
SH3TC1Q8TE82 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.35□□□□□ -1.87
SH3TC1Q8TE82 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.35□□□□□ -1.87
SH3TC1Q8TE82 RAB11AP1-201ENST00000442978 646 ntBASIC3.35□□□□□ -1.87
SH3TC1Q8TE82 ELOCP13-201ENST00000443934 329 ntBASIC3.35□□□□□ -1.87
SH3TC1Q8TE82 SSXP4-201ENST00000451349 245 ntBASIC3.35□□□□□ -1.87
SH3TC1Q8TE82 BX248409.1-201ENST00000455497 255 ntBASIC3.35□□□□□ -1.87
SH3TC1Q8TE82 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC3.35□□□□□ -1.87
SH3TC1Q8TE82 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC3.35□□□□□ -1.87
SH3TC1Q8TE82 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SH3TC1Q8TE82 RPS27P23-201ENST00000487608 251 ntBASIC3.35□□□□□ -1.87
SH3TC1Q8TE82 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.35□□□□□ -1.87
SH3TC1Q8TE82 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC3.35□□□□□ -1.87
SH3TC1Q8TE82 RNU6-202P-201ENST00000515998 96 ntBASIC3.35□□□□□ -1.87
SH3TC1Q8TE82 RN7SKP282-201ENST00000516824 299 ntBASIC3.35□□□□□ -1.87
SH3TC1Q8TE82 RNU6-1073P-201ENST00000517182 106 ntBASIC3.35□□□□□ -1.87
SH3TC1Q8TE82 AC007536.1-201ENST00000533382 349 ntBASIC3.35□□□□□ -1.87
SH3TC1Q8TE82 AC092451.2-201ENST00000538746 658 ntBASIC3.35□□□□□ -1.87
SH3TC1Q8TE82 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC3.35□□□□□ -1.87
SH3TC1Q8TE82 AC120053.1-201ENST00000607706 736 ntBASIC3.35□□□□□ -1.87
SH3TC1Q8TE82 AC078880.5-201ENST00000617845 421 ntBASIC3.35□□□□□ -1.87
SH3TC1Q8TE82 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
SH3TC1Q8TE82 AC110774.1-201ENST00000623567 2018 ntBASIC3.34□□□□□ -1.87
SH3TC1Q8TE82 ZNF849P-201ENST00000594711 1566 ntBASIC3.34□□□□□ -1.87
SH3TC1Q8TE82 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.34□□□□□ -1.87
SH3TC1Q8TE82 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
SH3TC1Q8TE82 RPL9P7-201ENST00000330965 580 ntBASIC3.34□□□□□ -1.87
SH3TC1Q8TE82 RNU6-1181P-201ENST00000384191 106 ntBASIC3.34□□□□□ -1.87
SH3TC1Q8TE82 PAICSP7-201ENST00000419829 962 ntBASIC3.34□□□□□ -1.87
SH3TC1Q8TE82 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.34□□□□□ -1.87
SH3TC1Q8TE82 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.34□□□□□ -1.87
SH3TC1Q8TE82 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC3.34□□□□□ -1.87
SH3TC1Q8TE82 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC3.34□□□□□ -1.87
SH3TC1Q8TE82 SETP8-201ENST00000435341 628 ntBASIC3.34□□□□□ -1.87
SH3TC1Q8TE82 HSPE1P28-201ENST00000443139 211 ntBASIC3.34□□□□□ -1.87
SH3TC1Q8TE82 AL513124.1-201ENST00000450410 614 ntBASIC3.34□□□□□ -1.87
SH3TC1Q8TE82 AC093392.2-201ENST00000450682 337 ntBASIC3.34□□□□□ -1.87
SH3TC1Q8TE82 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.34□□□□□ -1.87
SH3TC1Q8TE82 DYNLL1P6-201ENST00000503440 264 ntBASIC3.34□□□□□ -1.87
SH3TC1Q8TE82 NAMPTP2-201ENST00000505629 1115 ntBASIC3.34□□□□□ -1.87
SH3TC1Q8TE82 RNU6-416P-201ENST00000516265 103 ntBASIC3.34□□□□□ -1.87
SH3TC1Q8TE82 RNA5SP282-201ENST00000516355 108 ntBASIC3.34□□□□□ -1.87
SH3TC1Q8TE82 SNORA31.26-201ENST00000517250 137 ntBASIC3.34□□□□□ -1.87
SH3TC1Q8TE82 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.34□□□□□ -1.87
SH3TC1Q8TE82 HMGB1P1-201ENST00000522557 636 ntBASIC3.34□□□□□ -1.87
SH3TC1Q8TE82 IGJP1-201ENST00000522682 475 ntBASIC3.34□□□□□ -1.87
SH3TC1Q8TE82 AP000857.1-201ENST00000532151 543 ntBASIC3.34□□□□□ -1.87
SH3TC1Q8TE82 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
SH3TC1Q8TE82 AL512310.1-201ENST00000548639 172 ntBASIC3.34□□□□□ -1.87
SH3TC1Q8TE82 EIF5A2P1-201ENST00000564027 460 ntBASIC3.34□□□□□ -1.87
SH3TC1Q8TE82 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC3.34□□□□□ -1.87
SH3TC1Q8TE82 MIR3605-201ENST00000583214 100 ntBASIC3.34□□□□□ -1.87
SH3TC1Q8TE82 VN1R88P-201ENST00000596787 292 ntBASIC3.34□□□□□ -1.87
SH3TC1Q8TE82 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC3.34□□□□□ -1.87
SH3TC1Q8TE82 AL133393.1-201ENST00000603277 287 ntBASIC3.34□□□□□ -1.87
SH3TC1Q8TE82 MTATP6P2-201ENST00000603319 678 ntBASIC3.34□□□□□ -1.87
SH3TC1Q8TE82 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.34□□□□□ -1.87
SH3TC1Q8TE82 AC069234.5-201ENST00000611056 416 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms