Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SIMC1Q8NDZ2 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
SIMC1Q8NDZ2 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.38□□□□□ -1.71
SIMC1Q8NDZ2 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
SIMC1Q8NDZ2 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SIMC1Q8NDZ2 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
SIMC1Q8NDZ2 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC4.37□□□□□ -1.71
SIMC1Q8NDZ2 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SIMC1Q8NDZ2 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SIMC1Q8NDZ2 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.37□□□□□ -1.71
SIMC1Q8NDZ2 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SIMC1Q8NDZ2 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.37□□□□□ -1.71
SIMC1Q8NDZ2 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC4.37□□□□□ -1.71
SIMC1Q8NDZ2 RPL32P3-201ENST00000359025 275 ntBASIC4.37□□□□□ -1.71
SIMC1Q8NDZ2 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
SIMC1Q8NDZ2 RNA5SP502-201ENST00000362694 119 ntBASIC4.37□□□□□ -1.71
SIMC1Q8NDZ2 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SIMC1Q8NDZ2 AL031679.1-201ENST00000400616 525 ntBASIC4.37□□□□□ -1.71
SIMC1Q8NDZ2 AL591848.1-201ENST00000413092 322 ntBASIC4.37□□□□□ -1.71
SIMC1Q8NDZ2 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SIMC1Q8NDZ2 EI24P1-201ENST00000416584 867 ntBASIC4.37□□□□□ -1.71
SIMC1Q8NDZ2 SPA17P1-201ENST00000416656 452 ntBASIC4.37□□□□□ -1.71
SIMC1Q8NDZ2 AF228730.4-201ENST00000421457 183 ntBASIC4.37□□□□□ -1.71
SIMC1Q8NDZ2 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.37□□□□□ -1.71
SIMC1Q8NDZ2 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.37□□□□□ -1.71
SIMC1Q8NDZ2 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC4.37□□□□□ -1.71
SIMC1Q8NDZ2 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.37□□□□□ -1.71
SIMC1Q8NDZ2 MTCO1P42-201ENST00000457379 726 ntBASIC4.37□□□□□ -1.71
SIMC1Q8NDZ2 RPS26P28-201ENST00000470806 348 ntBASIC4.37□□□□□ -1.71
SIMC1Q8NDZ2 RPL12P20-201ENST00000475538 479 ntBASIC4.37□□□□□ -1.71
SIMC1Q8NDZ2 MTND1P3-201ENST00000484956 952 ntBASIC4.37□□□□□ -1.71
SIMC1Q8NDZ2 AC106872.3-201ENST00000495104 446 ntBASIC4.37□□□□□ -1.71
SIMC1Q8NDZ2 AC112204.1-201ENST00000502591 103 ntBASIC4.37□□□□□ -1.71
SIMC1Q8NDZ2 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC4.37□□□□□ -1.71
SIMC1Q8NDZ2 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC4.37□□□□□ -1.71
SIMC1Q8NDZ2 AC023141.12-201ENST00000512399 199 ntBASIC4.37□□□□□ -1.71
SIMC1Q8NDZ2 RNU1-6P-201ENST00000516290 144 ntBASIC4.37□□□□□ -1.71
SIMC1Q8NDZ2 Vault.1-201ENST00000516474 102 ntBASIC4.37□□□□□ -1.71
SIMC1Q8NDZ2 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC4.37□□□□□ -1.71
SIMC1Q8NDZ2 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.37□□□□□ -1.71
SIMC1Q8NDZ2 AC015912.2-201ENST00000571053 181 ntBASIC4.37□□□□□ -1.71
SIMC1Q8NDZ2 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC4.37□□□□□ -1.71
SIMC1Q8NDZ2 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC4.37□□□□□ -1.71
SIMC1Q8NDZ2 RN7SL652P-201ENST00000577769 300 ntBASIC4.37□□□□□ -1.71
SIMC1Q8NDZ2 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC4.37□□□□□ -1.71
SIMC1Q8NDZ2 AC209154.1-201ENST00000582156 337 ntBASIC4.37□□□□□ -1.71
SIMC1Q8NDZ2 MIR5096-201ENST00000583713 70 ntBASIC4.37□□□□□ -1.71
SIMC1Q8NDZ2 NRBF2P1-201ENST00000587407 859 ntBASIC4.37□□□□□ -1.71
SIMC1Q8NDZ2 AC068790.4-201ENST00000602474 263 ntBASIC4.37□□□□□ -1.71
SIMC1Q8NDZ2 AP001429.1-201ENST00000602568 530 ntBASIC4.37□□□□□ -1.71
SIMC1Q8NDZ2 BCRP9-201ENST00000605312 388 ntBASIC4.37□□□□□ -1.71
SIMC1Q8NDZ2 BNIP3P10-201ENST00000605360 577 ntBASIC4.37□□□□□ -1.71
SIMC1Q8NDZ2 AC139792.3-201ENST00000623525 224 ntBASIC4.37□□□□□ -1.71
SIMC1Q8NDZ2 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
SIMC1Q8NDZ2 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SIMC1Q8NDZ2 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
SIMC1Q8NDZ2 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SIMC1Q8NDZ2 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SIMC1Q8NDZ2 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SIMC1Q8NDZ2 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
SIMC1Q8NDZ2 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.37□□□□□ -1.71
SIMC1Q8NDZ2 EOGT-210ENST00000615922 1931 ntBASIC4.36□□□□□ -1.71
SIMC1Q8NDZ2 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SIMC1Q8NDZ2 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.36□□□□□ -1.71
SIMC1Q8NDZ2 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SIMC1Q8NDZ2 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SIMC1Q8NDZ2 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.36□□□□□ -1.71
SIMC1Q8NDZ2 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SIMC1Q8NDZ2 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SIMC1Q8NDZ2 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.36□□□□□ -1.71
SIMC1Q8NDZ2 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
SIMC1Q8NDZ2 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
SIMC1Q8NDZ2 RNA5SP52-201ENST00000362448 134 ntBASIC4.36□□□□□ -1.71
SIMC1Q8NDZ2 Y_RNA.162-201ENST00000363683 102 ntBASIC4.36□□□□□ -1.71
SIMC1Q8NDZ2 RN7SKP227-201ENST00000364445 330 ntBASIC4.36□□□□□ -1.71
SIMC1Q8NDZ2 Y_RNA.548-201ENST00000384656 105 ntBASIC4.36□□□□□ -1.71
SIMC1Q8NDZ2 SNORD115.1-201ENST00000391109 76 ntBASIC4.36□□□□□ -1.71
SIMC1Q8NDZ2 MIR320C1-201ENST00000408566 88 ntBASIC4.36□□□□□ -1.71
SIMC1Q8NDZ2 VDAC1P9-201ENST00000412766 841 ntBASIC4.36□□□□□ -1.71
SIMC1Q8NDZ2 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC4.36□□□□□ -1.71
SIMC1Q8NDZ2 AL353748.1-201ENST00000440753 474 ntBASIC4.36□□□□□ -1.71
SIMC1Q8NDZ2 SNRPGP6-201ENST00000451124 220 ntBASIC4.36□□□□□ -1.71
SIMC1Q8NDZ2 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC4.36□□□□□ -1.71
SIMC1Q8NDZ2 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC4.36□□□□□ -1.71
SIMC1Q8NDZ2 AC099563.1-201ENST00000456086 418 ntBASIC4.36□□□□□ -1.71
SIMC1Q8NDZ2 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC4.36□□□□□ -1.71
SIMC1Q8NDZ2 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC4.36□□□□□ -1.71
SIMC1Q8NDZ2 RPL39P36-201ENST00000490784 156 ntBASIC4.36□□□□□ -1.71
SIMC1Q8NDZ2 RPL23AP72-201ENST00000492447 435 ntBASIC4.36□□□□□ -1.71
SIMC1Q8NDZ2 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
SIMC1Q8NDZ2 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.36□□□□□ -1.71
SIMC1Q8NDZ2 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC4.36□□□□□ -1.71
SIMC1Q8NDZ2 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC4.36□□□□□ -1.71
SIMC1Q8NDZ2 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.36□□□□□ -1.71
SIMC1Q8NDZ2 AC007016.1-201ENST00000512110 244 ntBASIC4.36□□□□□ -1.71
SIMC1Q8NDZ2 RNU6-1281P-201ENST00000516223 105 ntBASIC4.36□□□□□ -1.71
SIMC1Q8NDZ2 AP003034.1-201ENST00000534621 422 ntBASIC4.36□□□□□ -1.71
SIMC1Q8NDZ2 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.36□□□□□ -1.71
SIMC1Q8NDZ2 AL845331.3-202ENST00000562856 261 ntBASIC4.36□□□□□ -1.71
SIMC1Q8NDZ2 AL157394.1-201ENST00000562983 1224 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms