Protein–RNA interactions for Protein: Q8N998

CCDC89, Coiled-coil domain-containing protein 89, humanhuman

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89Q8N998 RNU1-13P-201ENST00000384499 162 ntBASIC3.79□□□□□ -1.8
CCDC89Q8N998 MIR514A1-201ENST00000385133 98 ntBASIC3.79□□□□□ -1.8
CCDC89Q8N998 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC3.79□□□□□ -1.8
CCDC89Q8N998 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC3.79□□□□□ -1.8
CCDC89Q8N998 AC083875.1-201ENST00000419509 405 ntBASIC3.79□□□□□ -1.8
CCDC89Q8N998 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.79□□□□□ -1.8
CCDC89Q8N998 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC3.79□□□□□ -1.8
CCDC89Q8N998 TAAR7P-201ENST00000436141 242 ntBASIC3.79□□□□□ -1.8
CCDC89Q8N998 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.79□□□□□ -1.8
CCDC89Q8N998 UBE2V1P13-201ENST00000436983 439 ntBASIC3.79□□□□□ -1.8
CCDC89Q8N998 AC108734.1-201ENST00000439549 399 ntBASIC3.79□□□□□ -1.8
CCDC89Q8N998 EEF1E1P1-201ENST00000446998 430 ntBASIC3.79□□□□□ -1.8
CCDC89Q8N998 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC3.79□□□□□ -1.8
CCDC89Q8N998 USP9YP25-201ENST00000457708 443 ntBASIC3.79□□□□□ -1.8
CCDC89Q8N998 AL049874.1-201ENST00000489560 388 ntBASIC3.79□□□□□ -1.8
CCDC89Q8N998 AC093281.2-201ENST00000510153 597 ntBASIC3.79□□□□□ -1.8
CCDC89Q8N998 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.79□□□□□ -1.8
CCDC89Q8N998 MTCO1P35-201ENST00000515270 228 ntBASIC3.79□□□□□ -1.8
CCDC89Q8N998 RN7SKP60-201ENST00000516985 239 ntBASIC3.79□□□□□ -1.8
CCDC89Q8N998 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC3.79□□□□□ -1.8
CCDC89Q8N998 AP000867.2-201ENST00000532468 320 ntBASIC3.79□□□□□ -1.8
CCDC89Q8N998 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.79□□□□□ -1.8
CCDC89Q8N998 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC3.79□□□□□ -1.8
CCDC89Q8N998 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC3.79□□□□□ -1.8
CCDC89Q8N998 AC034268.2-201ENST00000571784 482 ntBASIC3.79□□□□□ -1.8
CCDC89Q8N998 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.79□□□□□ -1.8
CCDC89Q8N998 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.79□□□□□ -1.8
CCDC89Q8N998 BNIP3P39-201ENST00000601077 554 ntBASIC3.79□□□□□ -1.8
CCDC89Q8N998 AC112220.3-201ENST00000605502 502 ntBASIC3.79□□□□□ -1.8
CCDC89Q8N998 AL592295.2-201ENST00000612578 206 ntBASIC3.79□□□□□ -1.8
CCDC89Q8N998 AC008121.2-201ENST00000614647 523 ntBASIC3.79□□□□□ -1.8
CCDC89Q8N998 AC090132.2-201ENST00000615881 347 ntBASIC3.79□□□□□ -1.8
CCDC89Q8N998 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC89Q8N998 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC89Q8N998 AC022960.3-201ENST00000619794 441 ntBASIC3.79□□□□□ -1.8
CCDC89Q8N998 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.79□□□□□ -1.8
CCDC89Q8N998 AP000553.6-201ENST00000641242 118 ntBASIC3.79□□□□□ -1.8
CCDC89Q8N998 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC89Q8N998 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.79□□□□□ -1.8
CCDC89Q8N998 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.79□□□□□ -1.8
CCDC89Q8N998 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.79□□□□□ -1.8
CCDC89Q8N998 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC89Q8N998 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CCDC89Q8N998 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
CCDC89Q8N998 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
CCDC89Q8N998 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CCDC89Q8N998 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.78□□□□□ -1.8
CCDC89Q8N998 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.78□□□□□ -1.8
CCDC89Q8N998 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
CCDC89Q8N998 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
CCDC89Q8N998 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CCDC89Q8N998 DPY19L2P2-203ENST00000435536 1858 ntBASIC3.78□□□□□ -1.8
CCDC89Q8N998 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.78□□□□□ -1.8
CCDC89Q8N998 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CCDC89Q8N998 MIR372-201ENST00000362225 67 ntBASIC3.78□□□□□ -1.8
CCDC89Q8N998 RNU6-1027P-201ENST00000383998 107 ntBASIC3.78□□□□□ -1.8
CCDC89Q8N998 RNU6-584P-201ENST00000410350 95 ntBASIC3.78□□□□□ -1.8
CCDC89Q8N998 MTND1P21-201ENST00000412991 285 ntBASIC3.78□□□□□ -1.8
CCDC89Q8N998 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC3.78□□□□□ -1.8
CCDC89Q8N998 ELOCP9-201ENST00000418624 239 ntBASIC3.78□□□□□ -1.8
CCDC89Q8N998 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC3.78□□□□□ -1.8
CCDC89Q8N998 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.78□□□□□ -1.8
CCDC89Q8N998 MTCO2P20-201ENST00000437339 673 ntBASIC3.78□□□□□ -1.8
CCDC89Q8N998 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.78□□□□□ -1.8
CCDC89Q8N998 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.78□□□□□ -1.8
CCDC89Q8N998 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3.78□□□□□ -1.8
CCDC89Q8N998 RPL21P89-201ENST00000444021 467 ntBASIC3.78□□□□□ -1.8
CCDC89Q8N998 HSFY6P-201ENST00000445573 403 ntBASIC3.78□□□□□ -1.8
CCDC89Q8N998 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC3.78□□□□□ -1.8
CCDC89Q8N998 SNRPGP6-201ENST00000451124 220 ntBASIC3.78□□□□□ -1.8
CCDC89Q8N998 RNU6-420P-201ENST00000458780 107 ntBASIC3.78□□□□□ -1.8
CCDC89Q8N998 AC004801.2-202ENST00000463559 283 ntBASIC3.78□□□□□ -1.8
CCDC89Q8N998 AP001025.2-201ENST00000490908 477 ntBASIC3.78□□□□□ -1.8
CCDC89Q8N998 AC112198.1-201ENST00000505369 1220 ntBASIC3.78□□□□□ -1.8
CCDC89Q8N998 AC010460.1-201ENST00000507087 466 ntBASIC3.78□□□□□ -1.8
CCDC89Q8N998 SCARNA15.2-201ENST00000516409 127 ntBASIC3.78□□□□□ -1.8
CCDC89Q8N998 SCARNA14-201ENST00000516903 136 ntBASIC3.78□□□□□ -1.8
CCDC89Q8N998 RNU6-352P-201ENST00000516908 107 ntBASIC3.78□□□□□ -1.8
CCDC89Q8N998 AC239860.2-201ENST00000525886 270 ntBASIC3.78□□□□□ -1.8
CCDC89Q8N998 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.78□□□□□ -1.8
CCDC89Q8N998 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.78□□□□□ -1.8
CCDC89Q8N998 ACTR3BP3-201ENST00000565577 979 ntBASIC3.78□□□□□ -1.8
CCDC89Q8N998 RPL23AP84-201ENST00000571193 464 ntBASIC3.78□□□□□ -1.8
CCDC89Q8N998 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.78□□□□□ -1.8
CCDC89Q8N998 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.78□□□□□ -1.8
CCDC89Q8N998 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.78□□□□□ -1.8
CCDC89Q8N998 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.78□□□□□ -1.8
CCDC89Q8N998 VN1R82P-201ENST00000601481 356 ntBASIC3.78□□□□□ -1.8
CCDC89Q8N998 AC068313.1-201ENST00000604028 1008 ntBASIC3.78□□□□□ -1.8
CCDC89Q8N998 AC005344.1-201ENST00000613391 459 ntBASIC3.78□□□□□ -1.8
CCDC89Q8N998 FP236240.3-201ENST00000623061 327 ntBASIC3.78□□□□□ -1.8
CCDC89Q8N998 AL732618.1-201ENST00000623251 301 ntBASIC3.78□□□□□ -1.8
CCDC89Q8N998 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.78□□□□□ -1.8
CCDC89Q8N998 OR4G3P-201ENST00000633500 913 ntBASIC3.78□□□□□ -1.8
CCDC89Q8N998 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.78□□□□□ -1.8
CCDC89Q8N998 AP004289.2-201ENST00000444413 1457 ntBASIC3.78□□□□□ -1.8
CCDC89Q8N998 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.78□□□□□ -1.81
CCDC89Q8N998 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
CCDC89Q8N998 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CCDC89Q8N998 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 135.9 ms