Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 RPL23AP57-201ENST00000332361 466 ntBASIC4.39□□□□□ -1.71
SLC44A3Q8N4M1 RNU1-20P-201ENST00000363314 162 ntBASIC4.39□□□□□ -1.71
SLC44A3Q8N4M1 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
SLC44A3Q8N4M1 PRRC2CP1-201ENST00000404428 159 ntBASIC4.39□□□□□ -1.71
SLC44A3Q8N4M1 ZNF90P2-204ENST00000419323 1075 ntBASIC4.39□□□□□ -1.71
SLC44A3Q8N4M1 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC4.39□□□□□ -1.71
SLC44A3Q8N4M1 SNRPEP10-201ENST00000420249 274 ntBASIC4.39□□□□□ -1.71
SLC44A3Q8N4M1 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.39□□□□□ -1.71
SLC44A3Q8N4M1 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.39□□□□□ -1.71
SLC44A3Q8N4M1 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC4.39□□□□□ -1.71
SLC44A3Q8N4M1 CALM1P1-201ENST00000442082 433 ntBASIC4.39□□□□□ -1.71
SLC44A3Q8N4M1 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC4.39□□□□□ -1.71
SLC44A3Q8N4M1 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC4.39□□□□□ -1.71
SLC44A3Q8N4M1 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC4.39□□□□□ -1.71
SLC44A3Q8N4M1 AC007182.2-201ENST00000489251 402 ntBASIC4.39□□□□□ -1.71
SLC44A3Q8N4M1 AC010493.1-201ENST00000513479 292 ntBASIC4.39□□□□□ -1.71
SLC44A3Q8N4M1 AC034159.1-201ENST00000513885 583 ntBASIC4.39□□□□□ -1.71
SLC44A3Q8N4M1 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC4.39□□□□□ -1.71
SLC44A3Q8N4M1 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC4.39□□□□□ -1.71
SLC44A3Q8N4M1 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC4.39□□□□□ -1.71
SLC44A3Q8N4M1 CYCSP28-201ENST00000534284 321 ntBASIC4.39□□□□□ -1.71
SLC44A3Q8N4M1 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC4.39□□□□□ -1.71
SLC44A3Q8N4M1 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.39□□□□□ -1.71
SLC44A3Q8N4M1 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC4.39□□□□□ -1.71
SLC44A3Q8N4M1 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.39□□□□□ -1.71
SLC44A3Q8N4M1 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC4.39□□□□□ -1.71
SLC44A3Q8N4M1 AC007038.2-201ENST00000608095 740 ntBASIC4.39□□□□□ -1.71
SLC44A3Q8N4M1 AC093788.1-201ENST00000609356 927 ntBASIC4.39□□□□□ -1.71
SLC44A3Q8N4M1 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SLC44A3Q8N4M1 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC4.39□□□□□ -1.71
SLC44A3Q8N4M1 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SLC44A3Q8N4M1 AC112487.2-201ENST00000637950 304 ntBASIC4.39□□□□□ -1.71
SLC44A3Q8N4M1 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.39□□□□□ -1.71
SLC44A3Q8N4M1 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
SLC44A3Q8N4M1 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
SLC44A3Q8N4M1 ERCC6-202ENST00000374127 1782 ntBASIC4.39□□□□□ -1.71
SLC44A3Q8N4M1 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
SLC44A3Q8N4M1 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
SLC44A3Q8N4M1 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC4.39□□□□□ -1.71
SLC44A3Q8N4M1 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
SLC44A3Q8N4M1 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
SLC44A3Q8N4M1 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SLC44A3Q8N4M1 AL592182.3-201ENST00000642132 3304 ntBASIC4.38□□□□□ -1.71
SLC44A3Q8N4M1 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.38□□□□□ -1.71
SLC44A3Q8N4M1 AC024560.2-201ENST00000507981 1497 ntBASIC4.38□□□□□ -1.71
SLC44A3Q8N4M1 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SLC44A3Q8N4M1 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
SLC44A3Q8N4M1 Y_RNA.46-201ENST00000362695 102 ntBASIC4.38□□□□□ -1.71
SLC44A3Q8N4M1 RNU1-63P-201ENST00000383902 164 ntBASIC4.38□□□□□ -1.71
SLC44A3Q8N4M1 RNU11-4P-201ENST00000391149 133 ntBASIC4.38□□□□□ -1.71
SLC44A3Q8N4M1 EIF1P3-201ENST00000423841 334 ntBASIC4.38□□□□□ -1.71
SLC44A3Q8N4M1 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.38□□□□□ -1.71
SLC44A3Q8N4M1 FCF1P1-201ENST00000432690 571 ntBASIC4.38□□□□□ -1.71
SLC44A3Q8N4M1 PPIAP13-201ENST00000434706 478 ntBASIC4.38□□□□□ -1.71
SLC44A3Q8N4M1 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC4.38□□□□□ -1.71
SLC44A3Q8N4M1 HMGB3P9-201ENST00000441799 583 ntBASIC4.38□□□□□ -1.71
SLC44A3Q8N4M1 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC4.38□□□□□ -1.71
SLC44A3Q8N4M1 PTMAP3-201ENST00000447474 330 ntBASIC4.38□□□□□ -1.71
SLC44A3Q8N4M1 AL500522.2-201ENST00000448562 343 ntBASIC4.38□□□□□ -1.71
SLC44A3Q8N4M1 MTND1P12-201ENST00000455231 147 ntBASIC4.38□□□□□ -1.71
SLC44A3Q8N4M1 AC099563.1-201ENST00000456086 418 ntBASIC4.38□□□□□ -1.71
SLC44A3Q8N4M1 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.38□□□□□ -1.71
SLC44A3Q8N4M1 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC4.38□□□□□ -1.71
SLC44A3Q8N4M1 RNU6-1281P-201ENST00000516223 105 ntBASIC4.38□□□□□ -1.71
SLC44A3Q8N4M1 IGKV2-23-201ENST00000518729 323 ntBASIC4.38□□□□□ -1.71
SLC44A3Q8N4M1 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC4.38□□□□□ -1.71
SLC44A3Q8N4M1 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.38□□□□□ -1.71
SLC44A3Q8N4M1 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.38□□□□□ -1.71
SLC44A3Q8N4M1 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC4.38□□□□□ -1.71
SLC44A3Q8N4M1 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC4.38□□□□□ -1.71
SLC44A3Q8N4M1 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC4.38□□□□□ -1.71
SLC44A3Q8N4M1 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.38□□□□□ -1.71
SLC44A3Q8N4M1 AC008966.2-201ENST00000606157 453 ntBASIC4.38□□□□□ -1.71
SLC44A3Q8N4M1 AC069200.1-201ENST00000609511 323 ntBASIC4.38□□□□□ -1.71
SLC44A3Q8N4M1 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC4.38□□□□□ -1.71
SLC44A3Q8N4M1 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.38□□□□□ -1.71
SLC44A3Q8N4M1 AC126177.8-201ENST00000618339 1015 ntBASIC4.38□□□□□ -1.71
SLC44A3Q8N4M1 AP006248.2-201ENST00000623309 592 ntBASIC4.38□□□□□ -1.71
SLC44A3Q8N4M1 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SLC44A3Q8N4M1 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC4.38□□□□□ -1.71
SLC44A3Q8N4M1 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
SLC44A3Q8N4M1 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.38□□□□□ -1.71
SLC44A3Q8N4M1 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SLC44A3Q8N4M1 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
SLC44A3Q8N4M1 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SLC44A3Q8N4M1 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.38□□□□□ -1.71
SLC44A3Q8N4M1 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SLC44A3Q8N4M1 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SLC44A3Q8N4M1 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.37□□□□□ -1.71
SLC44A3Q8N4M1 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.37□□□□□ -1.71
SLC44A3Q8N4M1 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
SLC44A3Q8N4M1 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
SLC44A3Q8N4M1 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.37□□□□□ -1.71
SLC44A3Q8N4M1 RNU6-451P-201ENST00000362921 107 ntBASIC4.37□□□□□ -1.71
SLC44A3Q8N4M1 RNU4-73P-201ENST00000363164 141 ntBASIC4.37□□□□□ -1.71
SLC44A3Q8N4M1 SNORD56.2-201ENST00000363242 71 ntBASIC4.37□□□□□ -1.71
SLC44A3Q8N4M1 RNU1-39P-201ENST00000383897 165 ntBASIC4.37□□□□□ -1.71
SLC44A3Q8N4M1 RNU6-878P-201ENST00000384578 110 ntBASIC4.37□□□□□ -1.71
SLC44A3Q8N4M1 EEF1A1P40-201ENST00000412883 573 ntBASIC4.37□□□□□ -1.71
SLC44A3Q8N4M1 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 119.4 ms