Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 RPL31P1-201ENST00000398116 372 ntBASIC4.16□□□□□ -1.74
VPS52Q8N1B4 SLC9B1P2-201ENST00000398120 1184 ntBASIC4.16□□□□□ -1.74
VPS52Q8N1B4 TANK-206ENST00000406287 875 ntTSL 5 BASIC4.16□□□□□ -1.74
VPS52Q8N1B4 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC4.16□□□□□ -1.74
VPS52Q8N1B4 SYF2P2-201ENST00000417620 583 ntBASIC4.16□□□□□ -1.74
VPS52Q8N1B4 RPS27AP14-201ENST00000422868 454 ntBASIC4.16□□□□□ -1.74
VPS52Q8N1B4 AL831737.1-201ENST00000441288 271 ntBASIC4.16□□□□□ -1.74
VPS52Q8N1B4 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC4.16□□□□□ -1.74
VPS52Q8N1B4 SUMO2P2-201ENST00000456482 255 ntBASIC4.16□□□□□ -1.74
VPS52Q8N1B4 AC146507.1-201ENST00000468335 354 ntBASIC4.16□□□□□ -1.74
VPS52Q8N1B4 AC068724.1-201ENST00000487100 792 ntBASIC4.16□□□□□ -1.74
VPS52Q8N1B4 AC078817.1-201ENST00000492623 435 ntBASIC4.16□□□□□ -1.74
VPS52Q8N1B4 RPL31P61-201ENST00000496160 376 ntBASIC4.16□□□□□ -1.74
VPS52Q8N1B4 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC4.16□□□□□ -1.74
VPS52Q8N1B4 UBE2CP3-201ENST00000502715 450 ntBASIC4.16□□□□□ -1.74
VPS52Q8N1B4 AC021678.1-201ENST00000505195 936 ntBASIC4.16□□□□□ -1.74
VPS52Q8N1B4 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.16□□□□□ -1.74
VPS52Q8N1B4 HMGN1P11-201ENST00000508668 303 ntBASIC4.16□□□□□ -1.74
VPS52Q8N1B4 AC024589.1-201ENST00000512207 263 ntBASIC4.16□□□□□ -1.74
VPS52Q8N1B4 MTND3P5-201ENST00000512798 333 ntBASIC4.16□□□□□ -1.74
VPS52Q8N1B4 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC4.16□□□□□ -1.74
VPS52Q8N1B4 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.16□□□□□ -1.74
VPS52Q8N1B4 AC022861.1-201ENST00000522981 663 ntBASIC4.16□□□□□ -1.74
VPS52Q8N1B4 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
VPS52Q8N1B4 AP004247.1-201ENST00000531556 1289 ntBASIC4.16□□□□□ -1.74
VPS52Q8N1B4 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC4.16□□□□□ -1.74
VPS52Q8N1B4 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC4.16□□□□□ -1.74
VPS52Q8N1B4 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC4.16□□□□□ -1.74
VPS52Q8N1B4 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC4.16□□□□□ -1.74
VPS52Q8N1B4 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC4.16□□□□□ -1.74
VPS52Q8N1B4 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC4.16□□□□□ -1.74
VPS52Q8N1B4 AC146944.4-201ENST00000602697 718 ntBASIC4.16□□□□□ -1.74
VPS52Q8N1B4 AL161756.2-201ENST00000604597 246 ntBASIC4.16□□□□□ -1.74
VPS52Q8N1B4 MIR486-1-201ENST00000612171 68 ntBASIC4.16□□□□□ -1.74
VPS52Q8N1B4 HULC.1-201ENST00000612720 240 ntBASIC4.16□□□□□ -1.74
VPS52Q8N1B4 AC090116.1-201ENST00000615679 446 ntBASIC4.16□□□□□ -1.74
VPS52Q8N1B4 AC004009.2-201ENST00000623016 728 ntBASIC4.16□□□□□ -1.74
VPS52Q8N1B4 AC090582.1-201ENST00000636321 199 ntBASIC4.16□□□□□ -1.74
VPS52Q8N1B4 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.16□□□□□ -1.74
VPS52Q8N1B4 AC097714.1-201ENST00000511272 1647 ntBASIC4.16□□□□□ -1.74
VPS52Q8N1B4 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.16□□□□□ -1.74
VPS52Q8N1B4 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
VPS52Q8N1B4 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC4.16□□□□□ -1.74
VPS52Q8N1B4 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
VPS52Q8N1B4 ZNF734P-201ENST00000419494 1534 ntBASIC4.16□□□□□ -1.74
VPS52Q8N1B4 MTND4P4-201ENST00000439033 1366 ntBASIC4.15□□□□□ -1.74
VPS52Q8N1B4 NUP58P1-201ENST00000502546 1738 ntBASIC4.15□□□□□ -1.74
VPS52Q8N1B4 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.15□□□□□ -1.74
VPS52Q8N1B4 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.74
VPS52Q8N1B4 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
VPS52Q8N1B4 RNU5F-6P-201ENST00000362979 116 ntBASIC4.15□□□□□ -1.75
VPS52Q8N1B4 SNORA70E-201ENST00000384492 135 ntBASIC4.15□□□□□ -1.75
VPS52Q8N1B4 RPL17P50-201ENST00000396131 546 ntBASIC4.15□□□□□ -1.75
VPS52Q8N1B4 AL031679.1-201ENST00000400616 525 ntBASIC4.15□□□□□ -1.75
VPS52Q8N1B4 AL355379.1-201ENST00000405542 640 ntBASIC4.15□□□□□ -1.75
VPS52Q8N1B4 MIR1305-201ENST00000408300 86 ntBASIC4.15□□□□□ -1.75
VPS52Q8N1B4 RN7SKP142-201ENST00000411236 328 ntBASIC4.15□□□□□ -1.75
VPS52Q8N1B4 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC4.15□□□□□ -1.75
VPS52Q8N1B4 AL035423.1-201ENST00000420331 213 ntBASIC4.15□□□□□ -1.75
VPS52Q8N1B4 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC4.15□□□□□ -1.75
VPS52Q8N1B4 MTCO2P5-201ENST00000422621 426 ntBASIC4.15□□□□□ -1.75
VPS52Q8N1B4 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC4.15□□□□□ -1.75
VPS52Q8N1B4 HMGN2P31-201ENST00000432430 273 ntBASIC4.15□□□□□ -1.75
VPS52Q8N1B4 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.15□□□□□ -1.75
VPS52Q8N1B4 AC096638.2-201ENST00000434965 711 ntBASIC4.15□□□□□ -1.75
VPS52Q8N1B4 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
VPS52Q8N1B4 RSU1P2-202ENST00000437884 485 ntBASIC4.15□□□□□ -1.75
VPS52Q8N1B4 COX6CP12-201ENST00000446748 202 ntBASIC4.15□□□□□ -1.75
VPS52Q8N1B4 AP000936.2-201ENST00000447151 681 ntBASIC4.15□□□□□ -1.75
VPS52Q8N1B4 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC4.15□□□□□ -1.75
VPS52Q8N1B4 BX322784.1-201ENST00000455793 1077 ntBASIC4.15□□□□□ -1.75
VPS52Q8N1B4 SNRPGP9-201ENST00000456025 225 ntBASIC4.15□□□□□ -1.75
VPS52Q8N1B4 RNA5SP269-201ENST00000459032 137 ntBASIC4.15□□□□□ -1.75
VPS52Q8N1B4 AL133162.1-201ENST00000463228 453 ntBASIC4.15□□□□□ -1.75
VPS52Q8N1B4 AC106872.3-201ENST00000495104 446 ntBASIC4.15□□□□□ -1.75
VPS52Q8N1B4 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.15□□□□□ -1.75
VPS52Q8N1B4 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.15□□□□□ -1.75
VPS52Q8N1B4 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC4.15□□□□□ -1.75
VPS52Q8N1B4 AC022447.3-201ENST00000506865 495 ntBASIC4.15□□□□□ -1.75
VPS52Q8N1B4 TMEM248P1-201ENST00000510579 951 ntBASIC4.15□□□□□ -1.75
VPS52Q8N1B4 AC091965.2-201ENST00000512324 613 ntBASIC4.15□□□□□ -1.75
VPS52Q8N1B4 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC4.15□□□□□ -1.75
VPS52Q8N1B4 MTND5P4-201ENST00000514978 288 ntBASIC4.15□□□□□ -1.75
VPS52Q8N1B4 AC087369.1-201ENST00000520775 996 ntBASIC4.15□□□□□ -1.75
VPS52Q8N1B4 OR5AP1P-201ENST00000529730 940 ntBASIC4.15□□□□□ -1.75
VPS52Q8N1B4 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC4.15□□□□□ -1.75
VPS52Q8N1B4 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.15□□□□□ -1.75
VPS52Q8N1B4 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC4.15□□□□□ -1.75
VPS52Q8N1B4 CENPUP2-201ENST00000555897 1186 ntBASIC4.15□□□□□ -1.75
VPS52Q8N1B4 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC4.15□□□□□ -1.75
VPS52Q8N1B4 AC022968.1-201ENST00000567372 442 ntBASIC4.15□□□□□ -1.75
VPS52Q8N1B4 AC006270.2-201ENST00000578523 652 ntBASIC4.15□□□□□ -1.75
VPS52Q8N1B4 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC4.15□□□□□ -1.75
VPS52Q8N1B4 ABBA01006766.1-201ENST00000584728 294 ntBASIC4.15□□□□□ -1.75
VPS52Q8N1B4 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC4.15□□□□□ -1.75
VPS52Q8N1B4 AC119751.7-201ENST00000600494 245 ntBASIC4.15□□□□□ -1.75
VPS52Q8N1B4 AC012065.4-201ENST00000602445 679 ntBASIC4.15□□□□□ -1.75
VPS52Q8N1B4 AC025588.3-201ENST00000604182 274 ntBASIC4.15□□□□□ -1.75
VPS52Q8N1B4 AC097468.3-201ENST00000607956 456 ntBASIC4.15□□□□□ -1.75
VPS52Q8N1B4 AC103710.3-201ENST00000608157 948 ntBASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms