Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
HLA-DQA1Q5Y7H0 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
HLA-DQA1Q5Y7H0 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.74□□□□□ -1.65
HLA-DQA1Q5Y7H0 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
HLA-DQA1Q5Y7H0 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.73□□□□□ -1.65
HLA-DQA1Q5Y7H0 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
HLA-DQA1Q5Y7H0 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
HLA-DQA1Q5Y7H0 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
HLA-DQA1Q5Y7H0 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
HLA-DQA1Q5Y7H0 U8.4-201ENST00000363626 134 ntBASIC4.73□□□□□ -1.65
HLA-DQA1Q5Y7H0 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
HLA-DQA1Q5Y7H0 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
HLA-DQA1Q5Y7H0 SNORA66-201ENST00000384792 133 ntBASIC4.73□□□□□ -1.65
HLA-DQA1Q5Y7H0 MIR105-2-201ENST00000385083 81 ntBASIC4.73□□□□□ -1.65
HLA-DQA1Q5Y7H0 MIR765-201ENST00000390226 114 ntBASIC4.73□□□□□ -1.65
HLA-DQA1Q5Y7H0 RNU6-1106P-201ENST00000390845 107 ntBASIC4.73□□□□□ -1.65
HLA-DQA1Q5Y7H0 GJA6P-201ENST00000415117 1042 ntBASIC4.73□□□□□ -1.65
HLA-DQA1Q5Y7H0 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC4.73□□□□□ -1.65
HLA-DQA1Q5Y7H0 ACTR3BP6-201ENST00000422332 1241 ntBASIC4.73□□□□□ -1.65
HLA-DQA1Q5Y7H0 REREP1Y-201ENST00000422655 198 ntBASIC4.73□□□□□ -1.65
HLA-DQA1Q5Y7H0 RAC1P6-201ENST00000423911 575 ntBASIC4.73□□□□□ -1.65
HLA-DQA1Q5Y7H0 RPL30P3-201ENST00000424262 333 ntBASIC4.73□□□□□ -1.65
HLA-DQA1Q5Y7H0 RPS26P47-201ENST00000427219 348 ntBASIC4.73□□□□□ -1.65
HLA-DQA1Q5Y7H0 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4.73□□□□□ -1.65
HLA-DQA1Q5Y7H0 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.73□□□□□ -1.65
HLA-DQA1Q5Y7H0 REREP2Y-201ENST00000439103 200 ntBASIC4.73□□□□□ -1.65
HLA-DQA1Q5Y7H0 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.73□□□□□ -1.65
HLA-DQA1Q5Y7H0 BX276092.4-201ENST00000452056 248 ntBASIC4.73□□□□□ -1.65
HLA-DQA1Q5Y7H0 ELOCP24-201ENST00000456370 334 ntBASIC4.73□□□□□ -1.65
HLA-DQA1Q5Y7H0 SNORD97-201ENST00000459187 142 ntBASIC4.73□□□□□ -1.65
HLA-DQA1Q5Y7H0 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.73□□□□□ -1.65
HLA-DQA1Q5Y7H0 RBBP4P6-201ENST00000508098 202 ntBASIC4.73□□□□□ -1.65
HLA-DQA1Q5Y7H0 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.73□□□□□ -1.65
HLA-DQA1Q5Y7H0 AC108078.2-201ENST00000510750 236 ntBASIC4.73□□□□□ -1.65
HLA-DQA1Q5Y7H0 HMGB1P19-201ENST00000517578 577 ntBASIC4.73□□□□□ -1.65
HLA-DQA1Q5Y7H0 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC4.73□□□□□ -1.65
HLA-DQA1Q5Y7H0 PTP4A1P6-201ENST00000531034 478 ntBASIC4.73□□□□□ -1.65
HLA-DQA1Q5Y7H0 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC4.73□□□□□ -1.65
HLA-DQA1Q5Y7H0 NDUFB4P11-201ENST00000560510 395 ntBASIC4.73□□□□□ -1.65
HLA-DQA1Q5Y7H0 AC138761.3-201ENST00000579993 334 ntBASIC4.73□□□□□ -1.65
HLA-DQA1Q5Y7H0 AC013244.1-201ENST00000604279 193 ntBASIC4.73□□□□□ -1.65
HLA-DQA1Q5Y7H0 AC006329.2-201ENST00000611491 394 ntBASIC4.73□□□□□ -1.65
HLA-DQA1Q5Y7H0 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.73□□□□□ -1.65
HLA-DQA1Q5Y7H0 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.73□□□□□ -1.65
HLA-DQA1Q5Y7H0 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC4.73□□□□□ -1.65
HLA-DQA1Q5Y7H0 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC4.73□□□□□ -1.65
HLA-DQA1Q5Y7H0 AL359893.1-201ENST00000447628 1580 ntBASIC4.73□□□□□ -1.65
HLA-DQA1Q5Y7H0 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
HLA-DQA1Q5Y7H0 MTND5P19-201ENST00000424872 1794 ntBASIC4.73□□□□□ -1.65
HLA-DQA1Q5Y7H0 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.73□□□□□ -1.65
HLA-DQA1Q5Y7H0 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
HLA-DQA1Q5Y7H0 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
HLA-DQA1Q5Y7H0 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC4.73□□□□□ -1.65
HLA-DQA1Q5Y7H0 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC4.72□□□□□ -1.65
HLA-DQA1Q5Y7H0 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC4.72□□□□□ -1.65
HLA-DQA1Q5Y7H0 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.72□□□□□ -1.65
HLA-DQA1Q5Y7H0 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HLA-DQA1Q5Y7H0 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HLA-DQA1Q5Y7H0 TPTE2P4-201ENST00000258589 1605 ntBASIC4.72□□□□□ -1.65
HLA-DQA1Q5Y7H0 MTND5P10-201ENST00000603719 1809 ntBASIC4.72□□□□□ -1.65
HLA-DQA1Q5Y7H0 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
HLA-DQA1Q5Y7H0 SAGE4P-201ENST00000442271 3381 ntBASIC4.72□□□□□ -1.65
HLA-DQA1Q5Y7H0 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HLA-DQA1Q5Y7H0 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
HLA-DQA1Q5Y7H0 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.72□□□□□ -1.65
HLA-DQA1Q5Y7H0 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
HLA-DQA1Q5Y7H0 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HLA-DQA1Q5Y7H0 RNU6-249P-201ENST00000363016 102 ntBASIC4.72□□□□□ -1.65
HLA-DQA1Q5Y7H0 RNA5SP455-201ENST00000365190 119 ntBASIC4.72□□□□□ -1.65
HLA-DQA1Q5Y7H0 RNU6-550P-201ENST00000391057 101 ntBASIC4.72□□□□□ -1.65
HLA-DQA1Q5Y7H0 EIF4E2P1-201ENST00000393781 255 ntBASIC4.72□□□□□ -1.65
HLA-DQA1Q5Y7H0 AC005522.1-201ENST00000395416 346 ntBASIC4.72□□□□□ -1.65
HLA-DQA1Q5Y7H0 SPTLC1P2-201ENST00000407089 121 ntBASIC4.72□□□□□ -1.65
HLA-DQA1Q5Y7H0 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.72□□□□□ -1.65
HLA-DQA1Q5Y7H0 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC4.72□□□□□ -1.65
HLA-DQA1Q5Y7H0 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC4.72□□□□□ -1.65
HLA-DQA1Q5Y7H0 AL139396.1-201ENST00000421137 167 ntBASIC4.72□□□□□ -1.65
HLA-DQA1Q5Y7H0 RPS12P5-201ENST00000423449 371 ntBASIC4.72□□□□□ -1.65
HLA-DQA1Q5Y7H0 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.72□□□□□ -1.65
HLA-DQA1Q5Y7H0 RPL35AP22-201ENST00000436855 335 ntBASIC4.72□□□□□ -1.65
HLA-DQA1Q5Y7H0 CYCSP24-201ENST00000445119 316 ntBASIC4.72□□□□□ -1.65
HLA-DQA1Q5Y7H0 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC4.72□□□□□ -1.65
HLA-DQA1Q5Y7H0 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC4.72□□□□□ -1.65
HLA-DQA1Q5Y7H0 AL354714.3-201ENST00000447284 493 ntBASIC4.72□□□□□ -1.65
HLA-DQA1Q5Y7H0 AC073850.1-201ENST00000449243 255 ntBASIC4.72□□□□□ -1.65
HLA-DQA1Q5Y7H0 IGHV5-78-201ENST00000450948 295 ntBASIC4.72□□□□□ -1.65
HLA-DQA1Q5Y7H0 SCARNA18-201ENST00000459004 134 ntBASIC4.72□□□□□ -1.65
HLA-DQA1Q5Y7H0 AC116533.1-201ENST00000459748 321 ntBASIC4.72□□□□□ -1.65
HLA-DQA1Q5Y7H0 PPIAP21-201ENST00000464473 501 ntBASIC4.72□□□□□ -1.65
HLA-DQA1Q5Y7H0 ST13P14-201ENST00000474095 734 ntBASIC4.72□□□□□ -1.65
HLA-DQA1Q5Y7H0 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC4.72□□□□□ -1.65
HLA-DQA1Q5Y7H0 AC010350.1-201ENST00000504908 231 ntBASIC4.72□□□□□ -1.65
HLA-DQA1Q5Y7H0 AC008638.1-201ENST00000506035 866 ntBASIC4.72□□□□□ -1.65
HLA-DQA1Q5Y7H0 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC4.72□□□□□ -1.65
HLA-DQA1Q5Y7H0 AC098591.2-201ENST00000510152 315 ntBASIC4.72□□□□□ -1.65
HLA-DQA1Q5Y7H0 RNU6-1213P-201ENST00000517075 94 ntBASIC4.72□□□□□ -1.65
HLA-DQA1Q5Y7H0 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.72□□□□□ -1.65
HLA-DQA1Q5Y7H0 AC027369.5-201ENST00000533838 755 ntBASIC4.72□□□□□ -1.65
HLA-DQA1Q5Y7H0 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.72□□□□□ -1.65
HLA-DQA1Q5Y7H0 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms