Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.69□□□□□ -1.66
LONRF3Q496Y0 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
LONRF3Q496Y0 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
LONRF3Q496Y0 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.69□□□□□ -1.66
LONRF3Q496Y0 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
LONRF3Q496Y0 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.69□□□□□ -1.66
LONRF3Q496Y0 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
LONRF3Q496Y0 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
LONRF3Q496Y0 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
LONRF3Q496Y0 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
LONRF3Q496Y0 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.68□□□□□ -1.66
LONRF3Q496Y0 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
LONRF3Q496Y0 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
LONRF3Q496Y0 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
LONRF3Q496Y0 RNA5SP295-201ENST00000362655 121 ntBASIC4.68□□□□□ -1.66
LONRF3Q496Y0 RNU6-517P-201ENST00000384362 110 ntBASIC4.68□□□□□ -1.66
LONRF3Q496Y0 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
LONRF3Q496Y0 RNU6-952P-201ENST00000391164 108 ntBASIC4.68□□□□□ -1.66
LONRF3Q496Y0 RNA5SP104-201ENST00000410989 118 ntBASIC4.68□□□□□ -1.66
LONRF3Q496Y0 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC4.68□□□□□ -1.66
LONRF3Q496Y0 AL137014.1-201ENST00000420490 1226 ntBASIC4.68□□□□□ -1.66
LONRF3Q496Y0 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.68□□□□□ -1.66
LONRF3Q496Y0 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC4.68□□□□□ -1.66
LONRF3Q496Y0 AC069285.2-201ENST00000440210 275 ntBASIC4.68□□□□□ -1.66
LONRF3Q496Y0 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
LONRF3Q496Y0 PAXBP1P1-201ENST00000449315 447 ntBASIC4.68□□□□□ -1.66
LONRF3Q496Y0 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC4.68□□□□□ -1.66
LONRF3Q496Y0 snoU13.4-201ENST00000458916 104 ntBASIC4.68□□□□□ -1.66
LONRF3Q496Y0 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.68□□□□□ -1.66
LONRF3Q496Y0 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.68□□□□□ -1.66
LONRF3Q496Y0 AC010460.1-201ENST00000507087 466 ntBASIC4.68□□□□□ -1.66
LONRF3Q496Y0 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
LONRF3Q496Y0 RNA5SP468-201ENST00000516782 93 ntBASIC4.68□□□□□ -1.66
LONRF3Q496Y0 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.68□□□□□ -1.66
LONRF3Q496Y0 AC025881.1-201ENST00000518851 512 ntBASIC4.68□□□□□ -1.66
LONRF3Q496Y0 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC4.68□□□□□ -1.66
LONRF3Q496Y0 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC4.68□□□□□ -1.66
LONRF3Q496Y0 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC4.68□□□□□ -1.66
LONRF3Q496Y0 AP003465.2-201ENST00000602571 373 ntBASIC4.68□□□□□ -1.66
LONRF3Q496Y0 AP000403.1-201ENST00000603349 851 ntBASIC4.68□□□□□ -1.66
LONRF3Q496Y0 AL161729.3-201ENST00000603533 673 ntBASIC4.68□□□□□ -1.66
LONRF3Q496Y0 AC015871.2-201ENST00000603605 948 ntBASIC4.68□□□□□ -1.66
LONRF3Q496Y0 AC091805.2-201ENST00000603848 235 ntBASIC4.68□□□□□ -1.66
LONRF3Q496Y0 AC011468.4-201ENST00000603942 409 ntBASIC4.68□□□□□ -1.66
LONRF3Q496Y0 NDUFA8P1-201ENST00000605525 367 ntBASIC4.68□□□□□ -1.66
LONRF3Q496Y0 AL390208.1-201ENST00000605885 644 ntBASIC4.68□□□□□ -1.66
LONRF3Q496Y0 AC090186.1-201ENST00000605991 572 ntBASIC4.68□□□□□ -1.66
LONRF3Q496Y0 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC4.68□□□□□ -1.66
LONRF3Q496Y0 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.68□□□□□ -1.66
LONRF3Q496Y0 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
LONRF3Q496Y0 TEX21P-201ENST00000447107 1476 ntBASIC4.68□□□□□ -1.66
LONRF3Q496Y0 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.68□□□□□ -1.66
LONRF3Q496Y0 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
LONRF3Q496Y0 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
LONRF3Q496Y0 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
LONRF3Q496Y0 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC4.67□□□□□ -1.66
LONRF3Q496Y0 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
LONRF3Q496Y0 Y_RNA.41-201ENST00000362646 102 ntBASIC4.67□□□□□ -1.66
LONRF3Q496Y0 Y_RNA.97-201ENST00000363094 102 ntBASIC4.67□□□□□ -1.66
LONRF3Q496Y0 RNU6-328P-201ENST00000390887 106 ntBASIC4.67□□□□□ -1.66
LONRF3Q496Y0 RNU6-628P-201ENST00000410675 107 ntBASIC4.67□□□□□ -1.66
LONRF3Q496Y0 RN7SKP27-201ENST00000410684 333 ntBASIC4.67□□□□□ -1.66
LONRF3Q496Y0 UBE2V1P10-201ENST00000414685 269 ntBASIC4.67□□□□□ -1.66
LONRF3Q496Y0 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
LONRF3Q496Y0 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
LONRF3Q496Y0 AC017083.1-201ENST00000428093 483 ntBASIC4.67□□□□□ -1.66
LONRF3Q496Y0 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4.67□□□□□ -1.66
LONRF3Q496Y0 MTCYBP45-201ENST00000435243 565 ntBASIC4.67□□□□□ -1.66
LONRF3Q496Y0 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC4.67□□□□□ -1.66
LONRF3Q496Y0 Z74696.2-201ENST00000436514 498 ntBASIC4.67□□□□□ -1.66
LONRF3Q496Y0 SNORA71B-202ENST00000439232 272 ntBASIC4.67□□□□□ -1.66
LONRF3Q496Y0 AC002381.1-201ENST00000447049 280 ntBASIC4.67□□□□□ -1.66
LONRF3Q496Y0 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC4.67□□□□□ -1.66
LONRF3Q496Y0 snoU13.8-201ENST00000458890 104 ntBASIC4.67□□□□□ -1.66
LONRF3Q496Y0 OR9M1P-201ENST00000459641 921 ntBASIC4.67□□□□□ -1.66
LONRF3Q496Y0 AF213884.1-201ENST00000488102 463 ntBASIC4.67□□□□□ -1.66
LONRF3Q496Y0 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC4.67□□□□□ -1.66
LONRF3Q496Y0 AC093809.1-201ENST00000509155 340 ntBASIC4.67□□□□□ -1.66
LONRF3Q496Y0 KCTD9P2-201ENST00000512203 1013 ntBASIC4.67□□□□□ -1.66
LONRF3Q496Y0 IGKV2-38-201ENST00000517443 247 ntBASIC4.67□□□□□ -1.66
LONRF3Q496Y0 DUXAP2-201ENST00000519198 589 ntBASIC4.67□□□□□ -1.66
LONRF3Q496Y0 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC4.67□□□□□ -1.66
LONRF3Q496Y0 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
LONRF3Q496Y0 AP003392.2-201ENST00000527269 208 ntBASIC4.67□□□□□ -1.66
LONRF3Q496Y0 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC4.67□□□□□ -1.66
LONRF3Q496Y0 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC4.67□□□□□ -1.66
LONRF3Q496Y0 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC4.67□□□□□ -1.66
LONRF3Q496Y0 AC245505.1-201ENST00000556398 224 ntBASIC4.67□□□□□ -1.66
LONRF3Q496Y0 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC4.67□□□□□ -1.66
LONRF3Q496Y0 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.67□□□□□ -1.66
LONRF3Q496Y0 MIR6867-201ENST00000610636 67 ntBASIC4.67□□□□□ -1.66
LONRF3Q496Y0 AC008498.1-201ENST00000613012 531 ntBASIC4.67□□□□□ -1.66
LONRF3Q496Y0 AC027807.2-201ENST00000616099 408 ntBASIC4.67□□□□□ -1.66
LONRF3Q496Y0 AC138932.5-201ENST00000617759 563 ntBASIC4.67□□□□□ -1.66
LONRF3Q496Y0 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
LONRF3Q496Y0 MIR8059-201ENST00000620427 81 ntBASIC4.67□□□□□ -1.66
LONRF3Q496Y0 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC4.67□□□□□ -1.66
LONRF3Q496Y0 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
LONRF3Q496Y0 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
LONRF3Q496Y0 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 202.6 ms